EY650318

Overview
NameEY650318
Unique NameEY650318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.793e-80
Identity = 159/274 (58.03%), Postives = 194/274 (70.80%), Query Frame = 3
Query:    3 TRPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLILSDASRSQPSXTVNDMDRTEVMEDAXDX*RADLAKMSLT*QMNAFLSKDDL-STCRLGMTXAGLXECIGRAGNSCH----PIFILDFMKANITGGSTLFPRLAE 809
            T    ++PS+QR TDELVFEDF F SL++A P SLVHLYEASR+P  +LS+TQCSLVVDCGFSFTHA PV HNFT+N+A+KRIDLGGKA TNYLKELVSYR+INVMDETF++DD KEKLCFVSLD+ RDL++A  R  + L++ TYVLPDGVTHTKG+VKDP AA+R+L LS            + +   VM+   +  +AD+ K  +      FL  + L     LGM  AGL ECI RA NSCH    P+    +    +TGGSTLFP+L E
Sbjct:  100 TEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLRLA--RNGNTLIKSTYVLPDGVTHTKGYVKDPQAAKRFLSLS------------EKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVL---YQSIILTGGSTLFPQLKE 356          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.491e-73
Identity = 153/269 (56.88%), Postives = 185/269 (68.77%), Query Frame = 3
Query:    9 PLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLILSDASRSQPSXTVNDMDRTEVMEDAXDX*RADLAKMSLT*QMNAFLSKDDL-STCRLGMTXAGLXECIGRAGNSCHP-IFILDFMKANITGGSTLFPRLAE 809
            P F  P++Q ATDELVFE+  FKSL VAD PSLVHLYEASR+P   L   QCSLVVDCGFSFTHA+PV  NFT+NYAV+R+DLGGKALTNYLKEL+SYR++NVMDET +IDD KEKLCFVSLDV  DL++AR    DN  RC+Y+LPDG+T+ KGFVKD D A RY  L  A+        +D DR++      D  + +L++         FL  + L     LGM  AGL ECI RA  +CHP +  + F +  +TGGSTLFPR  E
Sbjct:  103 PQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPS--LFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSL-PANGESVRKDSSDSDRSKF----EDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTE 364          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.491e-73
Identity = 153/269 (56.88%), Postives = 185/269 (68.77%), Query Frame = 3
Query:    9 PLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLILSDASRSQPSXTVNDMDRTEVMEDAXDX*RADLAKMSLT*QMNAFLSKDDL-STCRLGMTXAGLXECIGRAGNSCHP-IFILDFMKANITGGSTLFPRLAE 809
            P F  P++Q ATDELVFE+  FKSL VAD PSLVHLYEASR+P   L   QCSLVVDCGFSFTHA+PV  NFT+NYAV+R+DLGGKALTNYLKEL+SYR++NVMDET +IDD KEKLCFVSLDV  DL++AR    DN  RC+Y+LPDG+T+ KGFVKD D A RY  L  A+        +D DR++      D  + +L++         FL  + L     LGM  AGL ECI RA  +CHP +  + F +  +TGGSTLFPR  E
Sbjct:  103 PQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPS--LFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSL-PANGESVRKDSSDSDRSKF----EDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTE 364          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.786e-29
Identity = 66/160 (41.25%), Postives = 101/160 (63.12%), Query Frame = 3
Query:    3 TRPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVK 482
            T P F   SIQ + +E++FE++ F+++   +  +L     ++ R +       C ++VD G+SFTH  P   +     A+ RI++GGK LTN+LKE++SYR ++VMDET +I+ VKE +C+VS D  RD+ IA+ +G+DN +   YVLPD  T  KGF K
Sbjct:   96 TEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGAL-----SAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMIDYVLPDFSTIKKGFCK 250          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29
Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 3
Query:    3 TRPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHL----YEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFV 479
            T+P+F +PSI+  T +LVFE+F F +     P  L+      +  ++         +C LV+D G+SFTH  PV        AVKR+D+GGK LTNYLKE++SYR  N+M+ET+I++++KE +C+VS +   D++I  ++ +  L  C Y LPD  T   G++
Sbjct:  100 TQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNMMEETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEIC-YALPDYSTGKHGYI 261          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29
Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 3
Query:    3 TRPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVK 482
            T P F   SIQ + +E++FE++ F+++   +  +L     ++ R +       C ++VD G+SFTH  P   +     A+ RI++GGK LTN+LKE++SYR ++VMDET +I+ VKE +C+VS D  RD+ IA+ +G++N +   YVLPD  T  KGF K
Sbjct:   96 TEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGAL-----SAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGFCK 250          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29
Identity = 64/160 (40.00%), Postives = 102/160 (63.75%), Query Frame = 3
Query:    3 TRPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVK 482
            T P F   SIQ + +E++FE++ F+++   +  +L     ++ R +       C ++VD G+SFTH  P   +     A+ RI++GGK LTN+LKE++SYR ++VMDET +I+ VKE +C+VS D  +D++IA+ +G++N +   YVLPD  T  KGF K
Sbjct:   96 TEPYFNFSSIQESMNEILFEEYQFQAVLRVNAGAL-----SAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYKDMEIAKLKGEENTVMVDYVLPDFSTIKKGFCK 250          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 67/175 (38.29%), Postives = 104/175 (59.43%), Query Frame = 3
Query:    3 TRPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSET------QCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPD---GVTHTKGFVKD-PDAA 497
            T P F LP+I    D+++FE+F F+S F   P +L+        PYG L E+      QC++V+D G+S+TH  P+     V   VKRID+GGK LTN+LK L+S+R  N++D+T +++ V+E   +VSL+   DL+  + + + N +   YVLPD     T   G+++  P+AA
Sbjct:  100 TEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALI--------PYGGLYESDQGIPPQCTIVIDMGYSYTHVVPIRDGQIVWEHVKRIDVGGKLLTNHLKHLISFRQWNMIDQTHVVNSVREACGYVSLNWKGDLETCKAKPRKNPIIQEYVLPDFSANSTSRTGYIRSGPNAA 266          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_ASPFU (Actin-like protein arp6 OS=Aspergillus fumigatus GN=arp6 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 98/287 (34.15%), Postives = 138/287 (48.08%), Query Frame = 3
Query:   18 ALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRR---PYGL-----LSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDL----QIARKRGKDNL---LRCTYVLPDGVTHTKGFVK--DP--DAAQRYLILSDASRSQPSXTVNDMDRTEVMEDAXDX*RADLAKMSLT*QMNAFLSKDDLSTCRLGMTXAGLXECIGRA----GNSCHPIFILDFMKANITGGSTLFPRLAE 809
            ALP++Q+  DE+V E++ F        P L    E       P G      +S  QC LVVD G+S T   PV+    +  A++R+D+GGK LTNYLKE+VS R  N++DET+I+++VKE +CFVS + A DL    Q  RKRG  +    +   YVLPD  T  KGF++  DP  +A +R  ILS  +    S  V                   L     T     F   D      +GM  AG+ + I ++        HP F+ + +   + GG+TL P   E
Sbjct:  140 ALPTLQKNADEIVMEEWGFGGYVRFVGPVLNAWNEVQSLFGDPIGQDSSSPISPKQCLLVVDSGYSHTTVTPVYKGQPIQRAIRRLDIGGKHLTNYLKEMVSMRQYNMVDETYIMNEVKEAVCFVSNNFAGDLEQTWQGNRKRGLTDAAEGITVDYVLPDPNTGKKGFMRPHDPLSNAKKRKSILSGGNAEALSEDV-----------------LILGNERFTVPEILFTPSD------IGMKQAGIPDIILQSLSVLPTGLHPSFLANVL---VVGGNTLIPGFLE 400          
BLAST of EY650318 vs. ExPASy Swiss-Prot
Match: ARP6_DICDI (Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 91/306 (29.74%), Postives = 150/306 (49.02%), Query Frame = 3
Query:   18 ALPSIQRATDELVFEDFNFKSLFVADPPSL--VHL------YEASRRPYGL------LSETQCSLVVDCGFSFTHAAPVFHNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYL---ILSDASRSQPSXTVN-----DMDRTEV--MEDAXDX*RADLAKMSLT*QMNAFLSKDD-----------------LSTCRLGMTXAGLXECIGRAGNSCHP-IFILDFMKANITGGSTLFPRLAE 809
            +L  +++   E+V+E + FKSL++    +L  VH+      Y+  +    L      L ++ C LVVDCG+S TH  P F N  +NYA+KR ++GGK LTNYLKE+VS+R  ++M ET +++ +KEK CF+S D   D++ ++    ++ L+  YVLP+          DP+    Y+   + ++ + +  +  +N     D D  ++   E+  +    D  K   T   N    +D                   +   +GM  AGL E I ++ N  +  + I  +    + GGSTLFP L E
Sbjct:  129 SLDDLRKTMYEVVYEQYKFKSLYLTTSSTLGLVHIKQQLLQYQQQQHQPPLDASMISLLKSPCHLVVDCGYSSTHIIPHFQNTRLNYAIKRFNIGGKLLTNYLKEIVSFRYWDMMHETKLMNTIKEKTCFISKDFIFDIKRSQIDKLNSNLKIDYVLPN--------YNDPNNKTGYIKENLNNNNNNNDKNDKLNVNIEKDKDNNDIKSKEEGEEIKLNDEIKKDSTTTTNTTKEEDMEQVLSLVNERFTVPELLFNPSDIGMNQAGLAESIVQSINCTNSNLHIPLYSNIILLGGSTLFPGLKE 426          
The following BLAST results are available for this feature:
BLAST of EY650318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 335
Match NameE-valueIdentityDescription
ARP6_ARATH3.793e-8058.03Actin-related protein 6 OS=Arabidopsis thaliana GN... [more]
ARP6_ORYSJ4.491e-7356.88Actin-related protein 6 OS=Oryza sativa subsp. jap... [more]
ARP6_ORYSI4.491e-7356.88Actin-related protein 6 OS=Oryza sativa subsp. ind... [more]
ARP6_MOUSE1.786e-2941.25Actin-related protein 6 OS=Mus musculus GN=Actr6 P... [more]
ARP6_SCHPO5.198e-2939.26Actin-like protein arp6 OS=Schizosaccharomyces pom... [more]
ARP6_HUMAN5.198e-2940.63Actin-related protein 6 OS=Homo sapiens GN=ACTR6 P... [more]
ARP6_CHICK6.788e-2940.00Actin-related protein 6 OS=Gallus gallus GN=ACTR6 ... [more]
ARP6_CRYNE3.153e-2638.29Actin-like protein ARP6 OS=Cryptococcus neoformans... [more]
ARP6_ASPFU1.565e-2534.15Actin-like protein arp6 OS=Aspergillus fumigatus G... [more]
ARP6_DICDI2.669e-2529.74Actin-related protein 6 OS=Dictyostelium discoideu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-G01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650318 ID=EY650318; Name=EY650318; organism=Citrus sinensis; type=EST; length=815bp
CCACGCGTCCGCTCTTCGCGCTTCCCTCTATCCAACGCGCCACCGACGAG
CTCGTCTTCGAGGACTTCAACTTCAAGTCGCTCTTCGTTGCCGACCCGCC
GTCGTTAGTTCACCTCTACGAGGCCAGCCGGCGACCGTACGGGCTGTTGT
CGGAGACGCAGTGTAGTCTTGTGGTTGACTGTGGGTTCAGTTTCACGCAC
GCGGCGCCGGTGTTTCATAATTTCACGGTGAATTACGCCGTTAAAAGGAT
TGACTTGGGCGGTAAGGCGTTGACTAATTACTTGAAGGAGCTGGTATCGT
ATCGCGCTATTAACGTTATGGATGAGACTTTCATTATCGATGATGTTAAG
GAGAAGTTGTGCTTTGTCTCCCTCGATGTCGCGCGTGATCTTCAAATTGC
CAGGAAACGCGGTAAGGACAATCTTTTGCGTTGCACATATGTCCTTCCTG
ATGGTGTTACACACACTAAGGGCTTTGTTAAAGACCCTGATGCCGCTCAG
AGGTATCTTATTCTGAGTGACGCTTCTCGATCTCAACCATCANAGACGGT
GAATGATATGGATCGGACAGAGGTTATGGAGGATGCTANGGACANATAGA
GAGCTGATTTGGCAAAAATGAGTTTGACTTGACAAATGAACGCTTTCTTG
TCCAAAGATGATCTTTCAACCTGCAGATTGGGGATGACCCANGCTGGACT
ANCTGAGTGCATTGGTCGAGCTGGTAATTCTTGCCATCCTATCTTCATTC
TGGACTTTATGAAAGCTAATATAACTGGTGGGAGCACGTTATTCCCTCGA
TTGGCTGAAGACTAA
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