EY650210

Overview
NameEY650210
Unique NameEY650210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650210 vs. ExPASy Swiss-Prot
Match: CBBY_RHOCA (Protein cbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 48/153 (31.37%), Postives = 78/153 (50.98%), Query Frame = 3
Query:  441 AKLIDLIQDWKTERYQQIIKSGTVEPMPGVLRLMDEANAAGKKVAVCSAATKSSVILCLENLIGMERFECLDCFLAXDDVKQKKPDPSIYVTAAKMLXISGDDCLVVEDNVIRVQAATRAGMACVITNTFPQQSRF*DAIAITPIKQRRGDDW 899
            AK+ DL +  KT+RY +II SG V  +PGV  L+D A A+G ++A+ +  T+++V   +         +  +   A D+V QKKP P +Y+ A + L +    CL  ED+   + +A  AG+                 + +TP +  RGDD+
Sbjct:   70 AKIADLHKA-KTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIATTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFEDSRAGLASARAAGL----------------RVVLTPSEYTRGDDF 205          
BLAST of EY650210 vs. ExPASy Swiss-Prot
Match: CBBYC_RALEH (Protein cbbY, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 3
Query:  450 IDLIQDWKTERYQQIIKSGTVEPMPGVLRLMDEANAAGKKVAVCSAATKSSVILCLENLIGMERFECLDCFLAXDDVKQKKPDPSIYVTAAKMLXISGDDCLVVEDNVIRVQAATRAGMACVITNT-FPQQSRF*DAIAITP 872
            ID +   KT  Y + + +G +   PG+ RL+DEA  AG  +A+ +  T +++   L+  +G +                KKP P +Y+   + L + G DCL +ED+   ++AA  AG+  V+T T F  Q  F  A+ + P
Sbjct:   75 IDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKPAPDVYLAVLERLGLEGGDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQDSFEGALLVLP 216          
BLAST of EY650210 vs. ExPASy Swiss-Prot
Match: CBBYP_RALEH (Protein cbbY, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 3
Query:  450 IDLIQDWKTERYQQIIKSGTVEPMPGVLRLMDEANAAGKKVAVCSAATKSSVILCLENLIGMERFECLDCFLAXDDVKQKKPDPSIYVTAAKMLXISGDDCLVVEDNVIRVQAATRAGMACVIT-NTFPQQSRF*DAIAITP 872
            ID +   KT  Y + + +G +   PG+ RL+ EA  AG  +A+ +  T +++   L+  +G +                KKP P +Y+   + L +   DCL +ED+   ++AA  AG+  V+T  TF  Q  F  A+ + P
Sbjct:   75 IDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPAPDVYLAVLERLGLEAGDCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQDSFEGALLVLP 216          
The following BLAST results are available for this feature:
BLAST of EY650210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CBBY_RHOCA9.781e-1431.37Protein cbbY OS=Rhodobacter capsulatus GN=cbbY PE=... [more]
CBBYC_RALEH1.081e-1230.28Protein cbbY, chromosomal OS=Ralstonia eutropha (s... [more]
CBBYP_RALEH4.543e-1128.87Protein cbbY, plasmid OS=Ralstonia eutropha (strai... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-E04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650210 ID=EY650210; Name=EY650210; organism=Citrus sinensis; type=EST; length=928bp
CACCAATGCTCTCCGTTTTAAAAGTAACAAGAAACCACTGTCCTTGTCTT
TAACCAGAAAAGCACTTCGCGTGTCGGCTTCTTCACAGTCTCTTCAAGCC
CTCATATTTGACTGCGATGGTGTGATTATTGAATCAGAGCACTTGCACCG
CCAAGCTTACAATGATGCTTTCTCTCACTTCAATGTCCGCTGCGACCCTT
CTTCTCAGCAGTCTCTCAATTGGGACCCCGAGTTTTATGACGTGCTCCAT
AATCAAATTGGGGGCGGCAAACCCAAAATGAGATGGTCTTGTTCCCGAGA
AATTGCTACTAGTTCAAATTTTTTGTTAAGTTTTTGAGCTTTTTGTTGAT
TGGTTTTTGGGAATTTTAAGGTACTTTAAAGAGCACGGGTGGCCATCTTC
CACCATATTCGATAATCCCCCAGTAACCGATGATGACCAAGCCAAGTTGA
TTGATCTAATTCAGGACTGGAAAACTGAACGGTACCAACAAATTATCAAA
TCTGGAACTGTGGAGCCTATGCCAGGAGTTTTGAGATTGATGGATGAAGC
CAATGCTGCTGGGAAAAAAGTAGCTGTTTGCTCTGCAGCAACCAAAAGTT
CAGTTATACTTTGTCTCGAAAACCTCATAGGAATGGAGCGGTTTGAATGT
CTCGACTGCTTCCTTGCANGTGATGATGTAAAGCAAAAGAAGCCTGATCC
ATCAATTTATGTGACTGCTGCTAAGATGCTANGTATATCGGGAGATGACT
GTTTGGTGGTAGAGGACAATGTCATTAGGGTACAAGCAGCAACCAGAGCT
GGGATGGCATGTGTGATCACTAACACGTTTCCACAGCAGAGCAGATTTTA
AGATGCTATCGCTATCACCCCGATTAAGCAACGAAGGGGTGATGACTGGG
ATTATTGCTCAAACCTGCACACTCTATT
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