EY650197

Overview
NameEY650197
Unique NameEY650197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.813e-41
Identity = 70/83 (84.34%), Postives = 72/83 (86.75%), Query Frame = 3
Query:   57 MPRLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            M RLQR+F      LGH  PDSPTLD+SEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQ GTG S
Sbjct:    1 MERLQRIFGAGGG-LGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVS 82          

HSP 2 Score: 53.5286 bits (127), Expect = 3.813e-41
Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 1
Query:  304 AVEARDHGFQTNMLDMPQSYWKTRN--GRWVGSPTSWLWVQALWCGLNTQYNFEPFESKGSCCGCGSYPLPRNGTRLPDA*RLSNPQTMVPGHSPLSTSSMLGTLLIHSIQSFSHG 645
            +VEA DH FQTNMLDM +   +     G +   P    W+  +   +NTQ +FE    +            + G  + DA R  NPQT++ G  P  T+S LG L   SIQ+  HG
Sbjct:   82 SVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV--DINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHG 194          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 7.923e-35
Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 3
Query:   57 MPRLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            M RL R+          PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV+DVFAMPQ GTG S
Sbjct:    1 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVS 83          

HSP 2 Score: 47.7506 bits (112), Expect = 7.923e-35
Identity = 26/53 (49.06%), Postives = 29/53 (54.72%), Query Frame = 2
Query:  344 LTCLNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            L  L  TGRPEM  GW H HPG G  LSGV      +   L++RA A V  PI
Sbjct:   96 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 148          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.923e-35
Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 3
Query:   57 MPRLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            M RL R+          PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV+DVFAMPQ GTG S
Sbjct:    1 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVS 83          

HSP 2 Score: 47.7506 bits (112), Expect = 7.923e-35
Identity = 26/53 (49.06%), Postives = 29/53 (54.72%), Query Frame = 2
Query:  344 LTCLNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            L  L  TGRPEM  GW H HPG G  LSGV      +   L++RA A V  PI
Sbjct:   96 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 148          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.971e-34
Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 3
Query:  108 PPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV+V+DVFAMPQ GTG S
Sbjct:   16 PPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVS 81          

HSP 2 Score: 47.7506 bits (112), Expect = 2.971e-34
Identity = 26/53 (49.06%), Postives = 29/53 (54.72%), Query Frame = 2
Query:  344 LTCLNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            L  L  TGRPEM  GW H HPG G  LSGV      +   L++RA A V  PI
Sbjct:   94 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 146          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.452e-32
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 3
Query:  102 GHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            G  P DS  +D+SE VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV V+DVFAMPQ GTG S
Sbjct:   18 GANPQDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVS 85          

HSP 2 Score: 46.9802 bits (110), Expect = 3.452e-32
Identity = 26/53 (49.06%), Postives = 28/53 (52.83%), Query Frame = 2
Query:  344 LTCLNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            L  L  TGRPEM  GW H HPG G  LSGV      +   L+ RA A V  PI
Sbjct:   98 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPI 150          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.074e-30
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 3
Query:  117 DSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            D P +D+SE VYISSLALLKML+HGR G PMEVMGLMLGEFVD++TVRVVDVFAMPQ GTG S
Sbjct:   20 DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVS 82          

HSP 2 Score: 46.595 bits (109), Expect = 3.074e-30
Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 1
Query:  304 AVEARDHGFQTNMLDMPQSYWKTRN--GRWVGSPTSWLWVQALWCGLNTQYNFEPFESKGSCCGCGSYPLPRNGTRLPDA*RLSNPQTMVPGHSPLSTSSMLGTLLIHSIQSFSHG 645
            +VEA D  FQ NM+DM +   +     G +   P    W+ ++   +NTQ +FE    +            + G  + DA RL NP T++ G  P  T+S LG +   SIQ+  HG
Sbjct:   82 SVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSV--DINTQQSFEQLTPRAVAVVVDPIQSVK-GKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHG 194          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.950e-29
Identity = 58/84 (69.05%), Postives = 62/84 (73.81%), Query Frame = 3
Query:   57 MPRLQR-MFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            M RLQR M       +G    + P  D+ E VYISSLALLKMLKH RAGVPMEVMGLMLG+FVDEYTV VVDVFAMPQ GTG S
Sbjct:    1 MDRLQRLMMSQRSNMIGAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVS 84          

HSP 2 Score: 41.2022 bits (95), Expect = 1.950e-29
Identity = 35/116 (30.17%), Postives = 55/116 (47.41%), Query Frame = 1
Query:  304 AVEARDHGFQTNMLDMPQSYWKTRN--GRWVGSPTSWLWVQALWCGLNTQYNFEPFESKGSCCGCGSYPLPRNGTRLPDA*RLSNPQTMVPGHSPLSTSSMLGTLLIHSIQSFSHG 645
            +VEA D  FQ  M+DM +   + +   G +   P    W+ ++   ++TQ +FE   S+            + G  + DA RL +P T+V    P  T+S +G L   +IQS  HG
Sbjct:   84 SVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSV--DVDTQRSFEQLNSRAVAVVVDPIQSVK-GKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSLIHG 196          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.606e-29
Identity = 57/83 (68.67%), Postives = 60/83 (72.29%), Query Frame = 3
Query:   57 MPRLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            M RLQR+             D    D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVDEYTV VVDVFAMPQ GTG S
Sbjct:    1 MERLQRLMMNTKVGAADANKD----DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVS 79          

HSP 2 Score: 41.5874 bits (96), Expect = 5.606e-29
Identity = 23/50 (46.00%), Postives = 25/50 (50.00%), Query Frame = 2
Query:  353 LNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            L  TGR +M  GW H HPG G  LS V      +   LN RA A V  PI
Sbjct:   95 LKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPI 144          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.097e-28
Identity = 56/83 (67.47%), Postives = 60/83 (72.29%), Query Frame = 3
Query:   57 MPRLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            M RLQR+             D    D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV VVDVFAMPQ GTG S
Sbjct:    1 MERLQRLMMNSKVGSADTGRD----DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVS 79          

HSP 2 Score: 41.5874 bits (96), Expect = 2.097e-28
Identity = 23/50 (46.00%), Postives = 25/50 (50.00%), Query Frame = 2
Query:  353 LNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            L  TGR +M  GW H HPG G  LS V      +   LN RA A V  PI
Sbjct:   95 LKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPI 144          
BLAST of EY650197 vs. ExPASy Swiss-Prot
Match: RPN11_ENCCU (26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi GN=RPN11 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.731e-27
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 3
Query:  108 PPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQRGTGAS 305
            P    PT D+SE V ISSLALLKMLKHGRAG+P+EVMGLMLGEFVDEYTV+VVDVFAMPQ GT  +
Sbjct:    8 PDDGEPTSDASETVQISSLALLKMLKHGRAGIPLEVMGLMLGEFVDEYTVKVVDVFAMPQSGTNVT 73          

HSP 2 Score: 37.7354 bits (86), Expect = 1.731e-27
Identity = 22/57 (38.60%), Postives = 29/57 (50.88%), Query Frame = 2
Query:  332 RLTCLTCLNPTGRPEMGDGWDHPHPGSGYRLSGVA*THSITLNPLNQRAAAAVAVPI 502
            ++  ++ L  TGR E   GW H HPG G  LS V  +   +   L +RA A V  PI
Sbjct:   82 QMEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPI 138          
The following BLAST results are available for this feature:
BLAST of EY650197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PSDE_ARATH3.813e-4184.3426S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_MOUSE7.923e-3572.2926S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_HUMAN7.923e-3572.2926S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_DROME2.971e-3483.3326S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_CAEEL3.452e-3280.8826S proteasome non-ATPase regulatory subunit 14 OS... [more]
RPN11_SCHPO3.074e-3080.9526S proteasome regulatory subunit rpn11 OS=Schizos... [more]
RPN11_ASHGO1.950e-2969.0526S proteasome regulatory subunit RPN11 OS=Ashbya ... [more]
RPN11_CANGA5.606e-2968.6726S proteasome regulatory subunit RPN11 OS=Candida... [more]
RPN11_YEAST2.097e-2867.4726S proteasome regulatory subunit RPN11 OS=Sacchar... [more]
RPN11_ENCCU1.731e-2777.2726S proteasome regulatory subunit RPN11 OS=Encepha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-D01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650197 ID=EY650197; Name=EY650197; organism=Citrus sinensis; type=EST; length=944bp
ATTTAGGCCACGACCACGCGTCCGAGGAATTGCTTAAAAACTANAACTTG
TCAAAAATGCCGCGATTGCAAAGAATGTTCGCTGGTGCCGGTGGCGCCTT
GGGTCACCCGCCACCAGACTCCCCGACTCTCGATTCATCGGAGCAGGTCT
ACATCTCCTCACTCGCGCTGCTCAAGATGCTCAAACACGGTAGAGCTGGT
GTGCCCATGGAGGTGATGGGTCTGATGCTGGGAGAGTTTGTGGATGAGTA
CACAGTTAGGGTTGTTGATGTGTTCGCTATGCCACAAAGAGGAACTGGTG
CGAGCTGTTGAAGCCCGCGATCATGGGTTCCAGACTAACATGCTTGACAT
GCCTCAATCCTACTGGAAGACCAGAAATGGGCGATGGGTGGGATCACCCA
CATCCTGGCTCTGGGTACAGGCTCTCTGGTGTGGCCTAAACACACAGTAT
AACTTTGAACCCTTTGAATCAAAGGGCAGCTGCTGCGGTTGCGGTTCCTA
TCCACTACCGCGAAACGGAACGCGCCTACCCGATGCCTAACGCTTGAGTA
ATCCCCAAACCATGGTGCCTGGCCACAGCCCACTGAGCACATCTTCTATG
CTTGGGACTCTTTTAATCCATTCCATCCAATCTTTCTCGCACGGTTCCGA
TAGCCTTCTTATTCCTCTGCTTTACTGCAGCGGTGCCGTCCTTGTTACTA
TTATCTCCTTATCTTCATATAATGCATGGCACGCGGGCGAAAACTGCCCG
CCGGAATTATAATTGAAAAAATGGATAAAACGTTATGGATGATATTGAAT
TCTTTTAATTCCCCCTCGTCTTTTCGCTCGCCGAGCGCACGGCAACGCGG
CCGGCANTCTCCCCTGGCACGCCCGTCACTTGAATCGTGCGGGCCGCGCA
AACCTCTAGACCCAAACGANACATCCATAAACACTTTTAACCCT
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