EY650193

Overview
NameEY650193
Unique NameEY650193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.691e-70
Identity = 127/208 (61.06%), Postives = 147/208 (70.67%), Query Frame = 2
Query:   95 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXXAFHGVSLKFP---SRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            AH +L ++P +++ +L+  + NP                   +FHGVSLK       L LS AA A+ KPLT           LKGTS+VEGVVTLTQE+ GPTTVNV++TGLTPGPHGFHLHE+GDTTNGC+STG HFNPN  THGAP+DE RHAGDL NI+ANA+GVAEATIVDNQI L GPN VVGRAFVVHEL DDLGK G  L
Sbjct:    3 AHCILFSSPAATT-SLIFPISNPNTAVSLPSS----------SFHGVSLKSTINRQSLTLSAAASAAPKPLTVFAATKKAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHEL 199          

HSP 2 Score: 49.6766 bits (117), Expect = 1.691e-70
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSL+TGNA GRLACGVVGLT V
Sbjct:  194 KGGHELSLSTGNAGGRLACGVVGLTPV 220          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 1.415e-69
Identity = 123/206 (59.71%), Postives = 145/206 (70.39%), Query Frame = 2
Query:   95 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXXAFHGVSLKF-PSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            AH +L +AP  ++ +L++   +                    +F+G+S K  P+  +LSL+  A+ KPLT           LKGTSNVEGVVTLTQED GPTTVNVR++GL PG HGFHLHE+GDTTNGCMSTG HFNP+  THGAP+DEVRHAGDL NIVAN +GVAEATIVDNQI L GPN+VVGRA VVHELEDDLGK G  L
Sbjct:    3 AHTILASAPSHTTFSLISPFSSTPTNALSSSLQSS-------SFNGLSFKLSPTTQSLSLSTSAASKPLTIVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHEL 201          

HSP 2 Score: 48.521 bits (114), Expect = 1.415e-69
Identity = 23/27 (85.19%), Postives = 23/27 (85.19%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELS TTGNA GRLACGVVGLT V
Sbjct:  196 KGGHELSPTTGNAGGRLACGVVGLTPV 222          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.845e-69
Identity = 117/165 (70.91%), Postives = 130/165 (78.79%), Query Frame = 2
Query:  221 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            +FHGVSLK  S+   +L+L++V S KP             LKGTSNVEGVVTLTQ+D GPTTV VR+TGL PG HGFHLHE+GDTTNGCMSTG HFNPN +THGAP DEVRHAGDL NI ANA+GVAEAT+VDNQI L GPN+VVGRA VVHELEDDLGK G  L
Sbjct:   34 SFHGVSLKVKSKTPQSLTLSSVTSPKPFIVFAATKKAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHEL 198          

HSP 2 Score: 50.8322 bits (120), Expect = 1.845e-69
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSLTTGNA GRLACGVVGLT +
Sbjct:  193 KGGHELSLTTGNAGGRLACGVVGLTPI 219          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.343e-69
Identity = 126/206 (61.17%), Postives = 141/206 (68.45%), Query Frame = 2
Query:   92 MAHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            MA   LV+  P SSH+LL T                       +F GVS+K   +   S  A ++ KPLT           LKGTS VEGVVTLTQ+D GPTTVNVR+TGLTPG HGFHLHEYGDTTNGC+STG HFNPN +THGAP+DE+RHAGDL NIVANA GVAEATIVDNQI L GPN+VVGRA VVHEL+DDLGK G  L
Sbjct:    1 MASQTLVSPSPLSSHSLLRT-----------------------SFSGVSVKLAPQF--STLATSNFKPLTVVAAAKKAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHEL 181          

HSP 2 Score: 49.6766 bits (117), Expect = 5.343e-69
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSL+TGNA GRLACGVVGLT V
Sbjct:  176 KGGHELSLSTGNAGGRLACGVVGLTPV 202          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 9.078e-69
Identity = 116/165 (70.30%), Postives = 130/165 (78.79%), Query Frame = 2
Query:  221 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            +F GVSL   ++   +L+L AV + KPLT           LKG SNVEGVVTL+Q+D GPTTVNVR+TGL PG HGFHLHEYGDTTNGCMSTGAHFNPN +THGAP DE+RHAGDL NIVANA+GVAE T+VDNQI L GPN+VVGRA VVHELEDDLGK G  L
Sbjct:   32 SFLGVSLNVNAKFGQSLTLYAVTTPKPLTVFAATKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHEL 196          

HSP 2 Score: 50.8322 bits (120), Expect = 9.078e-69
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSLTTGNA GRLACGVVGLT +
Sbjct:  191 KGGHELSLTTGNAGGRLACGVVGLTPI 217          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 3.425e-68
Identity = 113/162 (69.75%), Postives = 127/162 (78.40%), Query Frame = 2
Query:  224 FHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            FHG+SLK   +   S+    + KPL+           LKGTS+VEGVVTL+QED GPTTV+VR+TGLTPG HGFHLHE+GDTTNGCMSTGAHFNPN MTHGAP+D+VRHAGDL NI+ANA GVAEATIVD QI L GPN V+GRA VVHELEDDLGK G  L
Sbjct:   33 FHGLSLKLTRQ---SIPLATAPKPLSVVAVTKKAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHEL 191          

HSP 2 Score: 50.8322 bits (120), Expect = 3.425e-68
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSLTTGNA GRLACGVVGLT +
Sbjct:  186 KGGHELSLTTGNAGGRLACGVVGLTPI 212          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 7.593e-68
Identity = 118/166 (71.08%), Postives = 131/166 (78.92%), Query Frame = 2
Query:  221 AFHGVSLKFPS--RL-NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            +F GVSL   +  RL ++S A  A  K LT           LKGTS+VEGVVTLTQ+D GPTTVNVR+TGLTPGPHGFHLHE+GDTTNGC+STG HFNPNNMTHGAP+DE RHAGDL NI ANA+GVAE TIVDNQI L GPN+VVGRAFVVHEL+DDLGK G  L
Sbjct:   30 SFRGVSLNNNNLHRLQSVSFAVKAPSKALTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHEL 195          

HSP 2 Score: 49.6766 bits (117), Expect = 7.593e-68
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLT 765
            K GHELSLTTGNA GRLACGV+GLT
Sbjct:  190 KGGHELSLTTGNAGGRLACGVIGLT 214          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.927e-66
Identity = 112/152 (73.68%), Postives = 120/152 (78.95%), Query Frame = 2
Query:  254 RLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            RL    A  A+ + L            LKGTS VEGVVTLTQ+D GPTTVNVRVTGLTPG HGFHLHE+GDTTNGC+STG HFNPNN+THGAP+DEVRHAGDL NIVANA GVAEATIVD QI L GPN+VVGRAFVVHELEDDLGK G  L
Sbjct:   39 RLAAGPAGAAAARALVVADATKKAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHEL 190          

HSP 2 Score: 48.521 bits (114), Expect = 6.927e-66
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLT 765
            K GHELSL+TGNA GRLACGVVGLT
Sbjct:  185 KGGHELSLSTGNAGGRLACGVVGLT 209          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 7.556e-65
Identity = 109/163 (66.87%), Postives = 126/163 (77.30%), Query Frame = 2
Query:  221 AFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            +F GVS+K   +   S  + +  +PL+           LKG S VEGVVTLTQE+  PTTVNVR+TGLTPG HGFHLHEYGDTTNGC+STG HFNPN +THGAP+DE+RHAGDL NI+A+ANGVAEATIVDNQI L GPN+V+GRA VVHELEDDLGK G  L
Sbjct:   21 SFSGVSVKLSPQF--STLSRSKFQPLSVVAAAKKAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHEL 181          

HSP 2 Score: 49.6766 bits (117), Expect = 7.556e-65
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSL+TGNA GRLACGVVGLT V
Sbjct:  176 KGGHELSLSTGNAGGRLACGVVGLTPV 202          
BLAST of EY650193 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.674e-64
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 2
Query:  266 SLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLXNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKVGMNL 709
            S+AA AS + +            LKGTS V+GVVTL QED GPTTVNVR+TGLTPG HGFHLHEYGDTTNGC+STG+HFNPN +THGAP D VRHAGDL NIVAN +G+AEATIVD+QI L G N+VVGRAFVVHELEDDLGK G  L
Sbjct:   48 SIAAAASPRSMVVVAATKKAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHEL 195          

HSP 2 Score: 51.2174 bits (121), Expect = 1.674e-64
Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  691 KSGHELSLTTGNAXGRLACGVVGLTXV 771
            K GHELSLTTGNA GRLACGVVGLT V
Sbjct:  190 KGGHELSLTTGNAGGRLACGVVGLTPV 216          
The following BLAST results are available for this feature:
BLAST of EY650193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
SODCP_SOLCS1.691e-7061.06Superoxide dismutase [Cu-Zn], chloroplastic OS=Sol... [more]
SODCP_SPIOL1.415e-6959.71Superoxide dismutase [Cu-Zn], chloroplastic OS=Spi... [more]
SODCP_PETHY1.845e-6970.91Superoxide dismutase [Cu-Zn], chloroplastic OS=Pet... [more]
SODCP_PEA5.343e-6961.17Superoxide dismutase [Cu-Zn], chloroplastic OS=Pis... [more]
SODCP_SOLLC9.078e-6970.30Superoxide dismutase [Cu-Zn], chloroplastic OS=Sol... [more]
SODCP_VITVI3.425e-6869.75Superoxide dismutase [Cu-Zn], chloroplastic OS=Vit... [more]
SODCP_ARATH7.593e-6871.08Superoxide dismutase [Cu-Zn], chloroplastic OS=Ara... [more]
SODCP_ORYSJ6.927e-6673.68Superoxide dismutase [Cu-Zn], chloroplastic OS=Ory... [more]
SODCP_MEDSA7.556e-6566.87Superoxide dismutase [Cu-Zn], chloroplastic OS=Med... [more]
SODCP_ZANAE1.674e-6471.62Superoxide dismutase [Cu-Zn], chloroplastic OS=Zan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-C09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650193 ID=EY650193; Name=EY650193; organism=Citrus sinensis; type=EST; length=902bp
CAAAATCTTATTATCAATTAACATCATCCGTCCGTCCGTCCATCCGTCCA
TCCACTCACCCTCACGCTCAATGCAAGCCGCAATAGCAGCCATGGCTCAC
GTTCTCCTCGTAGCAGCACCGCCCTCTTCATCTCACACACTCCTTGCCAC
ATTGCCAAATCCTAGCAGTATCACGCGCTCTTCCTCTTCTTCTTCTTCTC
ATTCTCCCTCGCTTCACTCTGCATTCCACGGCGTCTCCCTCAAATTCCCC
TCTCGTCTCAACTTATCTCTCGCCGCCGTGGCCTCCAAGAAGCCGTTGAC
TGTCGTTGCTGCCGCCAAGAAAGCGGTGGCTGTTCTTAAAGGCACTTCCA
ATGTTGAAGGAGTTGTTACGTTGACCCAAGAAGATGGCGGTCCTACGACT
GTCAATGTTCGTGTTACTGGTCTTACTCCTGGGCCTCACGGGTTCCACCT
ACACGAATATGGTGATACGACAAATGGGTGTATGTCAACAGGAGCACATT
TCAATCCTAATAACATGACACACGGTGCTCCTAAAGATGAAGTGCGACAC
GCGGGTGACCTGNGAAACATAGTTGCTAACGCCAATGGTGTGGCAGAAGC
AACAATTGTGGACAACCAGATATCACTGGATGGTCCAAACACAGTAGTTG
GAAGAGCCTTTGTGGTTCATGAGCTTGAGGATGACCTTGGAAAAGTGGGC
ATGAACTTAGTCTAACCACTGGCAATGCANGTGGAAGACTGGCATGCGGT
GTCGTTGGCTTGACTNCGGTATGAGATCAGCAAACCAGTGTGGTTGCACT
ATATGCTGCATGCTTTTTCCAGATATCAAATCGAGCAAGTACAGTGTTGA
AGTGAGAGCGTGTACATNNAATTGTGAGACAGCTGGTATAATAAAATATG
CT
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