EY650188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H56_ARATH (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.467e-36 Identity = 79/128 (61.72%), Postives = 98/128 (76.56%), Query Frame = 3 Query: 348 DHSFSRLLELAADNDVEGFKQCICDTSAICEVGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHGIRHLIVLV 731 +HSFS LLE AADNDVEGF++ + D S I ++GLWY QR +++VL+ RTPLMVA+ YGS+DVVK ILS +A++NL+CG DKSTALH AASG SVN++ V KLLL GAD N AHG R + VLV Sbjct: 36 EHSFSALLEFAADNDVEGFRRQLSDVSCINQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLDVVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLV 163
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 7.429e-33 Identity = 78/133 (58.65%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 336 TMKSDHSFSRLLELAADNDVEGFKQCI-CDTSAICEVGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHGIRHLIVLV 731 T++++ +F+ LLELAA+NDVEG + I D S + E GLWY Q+ SK +V +RTPLMVAA YGS+DV+KLI+SLT ADVN CG D++TALH AASGG+VNA+ V KLLL AGAD N A G R V+V Sbjct: 38 TVETEDTFASLLELAANNDVEGVRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSIDVIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIV 170
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.664e-27 Identity = 68/130 (52.31%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 330 TETMKSDHSFSRLLELAADNDVEGFKQCI--CDTSAICEVGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHGIR 713 T T+ +D +F+ LLELAAD+D EG ++ + +A E GLWY ++ VL+HRTPLMVAA YGS+ V++L+LSL DVN CG D +TALH AASGGS + V KLLL AGAD++ T A G R Sbjct: 58 TLTVDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYG-----RRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYR 182
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.580e-19 Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 333 ETMKSDHSFSRLLELAADNDVEGFKQCICDTSA-ICEVGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHGIRHLIVLVSIQNVLI--QGGPLEDLXRNGG 791 E+ + + LLE AA +D++ FK+ + + + E GLWY + SKK+ L+ RTPLMVAA YGS+ V+ I+S K+DVN CG ++ T LH A +G SVN + V +LL A A N A+G + L V V + + + +E L R GG Sbjct: 19 ESRQKEEETMLLLEFAACDDLDSFKREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVLTFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFVRVSRFVASPRRKAVELLLRGGG 174
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.817e-18 Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 357 FSRLLELAADNDVEGFKQCICDTS--AICEVGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHG 707 FS LLE +A ND+ GFK + + +I GLWY + SKK+ + RTPLM+AA +GS +VV I+S DVN +CG D +TALH A SG S N++ + LLL A+ + A+G Sbjct: 11 FSLLLESSACNDLSGFKSLVEEEGLESIDGSGLWYGRRLGSKKMGFEERTPLMIAALFGSKEVVDYIISTGLVDVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYG 129
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.565e-17 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 366 LLELAADNDVEGFKQCICDTSA--ICEVGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHG 707 LLE AA +D+ FK+ I + + I E G WY + SKK+ + RTPLMVAA YGS++V+ I++ ++DVN C +K TALH A SG SV+ V + K+LL A A N A+G Sbjct: 33 LLEFAACDDLSSFKREIEENPSVEIDESGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANG 148
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H50_ORYSJ (Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16 Identity = 56/112 (50.00%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 366 LLELAADNDVEGFKQCICDTSAICE-----VGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKA-DVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGAD 683 LLELAA +DV+G + + + VGLWY + + RTPLMVAA YGS VV L++ L DVN G D +TALH AASGGS NAV V KLLL AGAD Sbjct: 27 LLELAAADDVDGLRGALAEGGEEAAELADGVGLWYGRSK-----AYEARTPLMVAATYGSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGAD 133
BLAST of EY650188 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 360 SRLLELAADNDVEGFKQCICDTSAICEV-GLWYSFQRLS-KKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHXAASGGSVNAVHVAKLLLFAGADSNPTCAHGIR 713 S LLELAA +DV ++ + + V GLWY ++ ++ RT MVAA YGS V+ +++ A+ D +T LH AA+GG+ NAV +LLL AGA + A G+R Sbjct: 26 SLLLELAAADDVAAVRRVVEEEKVSLGVAGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPAEAARASETDGATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLR 145 The following BLAST results are available for this feature:
BLAST of EY650188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650188 ID=EY650188; Name=EY650188; organism=Citrus sinensis; type=EST; length=945bpback to top |