EY650177

Overview
NameEY650177
Unique NameEY650177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650177 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.014e-28
Identity = 77/213 (36.15%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  127 KVKMG--PLSASPMGFGTWAWGNQFLWGYQESMDSQLQQT---FNLAVENGINLFDTADSYGTGRLNG--KSEKLLGKFISEIPWQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALW------NGLVAMYENGLFRAVGVSNYGPNQLVKIHDYLTARRVPLCSAQVQFSLLSMAENPLEIK 726
            KVK+G   L  + +G G W+WG+   W   +  D +L+     F+ +++NGI+ FDTA+ YG+    G   SE LLG+FI E   ++     + +ATKFAA PWR      V A + SL+RL++  + + QLHW            LW      +GL    E GL +AVGVSNY   +L   ++ L  R +PL S QV +SL+  A     +K
Sbjct:   48 KVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERK-ERYPGAEVSVATKFAALPWRFGRESVVTALKDSLSRLELSSVDLYQLHWP----------GLWGNEGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVK 249          

HSP 2 Score: 26.1794 bits (56), Expect = 8.014e-28
Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 3
Query:  717 GDQDICDSLGFR*ISYSPL*LRMLTGK 797
            G +  CD LG   I+YSP+    LTGK
Sbjct:  247 GVKAACDELGVTLIAYSPIAQGALTGK 273          
BLAST of EY650177 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 1
Query:  145 LSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPWQKQVQNNIVIATKFAAYPWR-------LTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYENGLFRAVGVSNYGPNQL 624
            + AS +G GTWA G   +WG  +   S   +T   A++ GI L DTA +YG     G+SE+++GK I E   + QV    ++ATK  A  W+           + V     SL RLQ + I + Q+HW      P +E A    +  +Y+ G  RA+GVSN+   Q+
Sbjct:   11 IEASRIGLGTWAIGGT-MWGGTDEKTSI--ETIRAALDQGITLIDTAPAYGF----GQSEEIVGKAIKEYGKRDQV----ILATK-TALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDP-LVPIEETA--EVMKELYDAGKIRAIGVSNFSIEQM 162          
The following BLAST results are available for this feature:
BLAST of EY650177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1669_ARATH8.014e-2836.15Uncharacterized oxidoreductase At1g06690, chloropl... [more]
GS69_BACSU1.012e-1234.13General stress protein 69 OS=Bacillus subtilis GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-B03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650177 ID=EY650177; Name=EY650177; organism=Citrus sinensis; type=EST; length=883bp
CCGGNAATTCCCGCTCGACCCACGCGTCCGCCCACGGTTTTCTATTTTAG
CTGCTTCAACACTTTCCATGAAATCTCCTCTCCACTCTTCAAGCCTCCTA
AACTCCCTCTCTTTTGGCCATGGGAAAAGGTAAAGATGGGACCATTGAGT
GCTTCCCCAATGGGTTTTGGCACCTGGGCATGGGGCAACCAGTTTCTTTG
GGGATATCAAGAATCAATGGACTCTCAGCTTCAACAAACCTTTAACTTGG
CCGTGGAGAATGGTATTAACCTCTTTGATACTGCTGATTCTTATGGGACT
GGCAGGTTAAATGGAAAGAGTGAAAAGCTTCTTGGAAAATTTATCAGTGA
AATTCCATGGCAAAAGCAGGTACAAAATAATATTGTGATTGCTACAAAGT
TTGCAGCATACCCTTGGCGTCTGACACCGGGGCAGTTTGTAAATGCATGC
AGGGCCTCTCTTGCCCGTCTGCAGATTGAGCAAATTGGAATTGGGCAATT
ACATTGGTCTACTGCAAATTACGCTCCTCCACAAGAATTAGCTCTTTGGA
ATGGTTTAGTGGCAATGTACGAGAATGGTTTATTCCGCGCAGTTGGGGTG
AGCAACTATGGACCAAACCAGCTNGTGAAGATTCATGATTACCTCACAGC
TAGAAGAGTGCCTCTGTGCTCGGCACAGGTGCAGTTTTCTTTGCTGAGTA
TGGCAGAAAATCCCCTGGAGATCAAGATATATGTGATTCTCTGGGTTTCC
GCTAGATATCTTATAGCCCTCTATGACTCCGAATGCTAACTGGGAAAAAT
CACCTGCTAAACTTCCCGAGGACCCTGGGCCATTGTTTTAAGCAAATCTT
CCCGGTTGAAGCCTTTTTGCCCTTTCTAAAGAA
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