EY650168

Overview
NameEY650168
Unique NameEY650168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.198e-14
Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = 2
Query:  461 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            L+ V ++V LPL  ++  N                   V+GV + VWWG+ E +   +Y+WS Y ++ ++V+K GLKL   + FH           IPLP WV  IGE    IFYT++SG
Sbjct:   10 LNYVPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMIDVWWGIIEQKGPKEYDWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVNIPLPKWVLDIGESDPDIFYTNRSG 129          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.749e-14
Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = 2
Query:  461 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            L+ V ++V LPL  VS  N                   V+GV + VWWG+ E +   +Y+WS Y ++ ++V++ GLKL   + FH           IP+P WV  IGE    IFYT++SG
Sbjct:   10 LNYVPVYVMLPLGVVSVNNVFEDPEGLKEQLVQLREAGVDGVMVDVWWGIIEQKGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQWVLDIGESDPDIFYTNRSG 129          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.749e-14
Identity = 42/117 (35.90%), Postives = 56/117 (47.86%), Query Frame = 2
Query:  470 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            V+++V LPLD VS  N                   V+GV + VWWG+ E +    Y+WS Y  + E+V+K GLKL   + FH           IP+P WV  +G     IFYTD  G
Sbjct:   10 VQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHG 126          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.749e-14
Identity = 42/117 (35.90%), Postives = 56/117 (47.86%), Query Frame = 2
Query:  470 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            V+++V LPLD VS  N                   V+GV + VWWG+ E +    Y+WS Y  + E+V+K GLKL   + FH           IP+P WV  +G     IFYTD  G
Sbjct:   10 VQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHG 126          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.091e-13
Identity = 39/117 (33.33%), Postives = 59/117 (50.43%), Query Frame = 2
Query:  470 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            V+++V LPLD ++  NT                   +GV + VWWG+ E +  G Y+WS Y  V ++V++ GLKL   +  H           IP+P WV  +G+    IFYT++SG
Sbjct:   10 VQVYVMLPLDVITVDNTFEKEDETRAQLKKLTEAGADGVMIDVWWGLVEGKEPGVYDWSAYRQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDVGKSNPDIFYTNRSG 126          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.425e-13
Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = 2
Query:  461 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            L+ V ++V LPL  ++  N                   V+GV + VWWG+ E +   +Y+WS Y ++ ++V++ GLKL   + FH           IP+P WV  IGE    IFYT++SG
Sbjct:   10 LNYVPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMVDVWWGIIEQKGPKEYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVTIPIPQWVLDIGESDPDIFYTNRSG 129          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.430e-13
Identity = 40/117 (34.19%), Postives = 56/117 (47.86%), Query Frame = 2
Query:  470 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            V+++V LPLD VS  N                   V+GV + VWWG+ E +    Y+WS Y  V ++V + GLKL   + FH           IP+P WV  +G     IFYT++ G
Sbjct:   10 VQVYVMLPLDVVSVDNKFEKGDEIRAQLKKLTEAGVDGVMIDVWWGLVEGKGPKAYDWSAYKQVFDLVHEAGLKLQAIMSFHQCGGNVGDVVNIPIPQWVRDVGATDPDIFYTNRGG 126          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 5.413e-13
Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  470 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSGQQIQGAYHWLVMXLQXFMGKLXFSVPRILRE 898
            V L+V LPL  V+  N                    +GV + VWWG+ E +   +Y+WS Y  + ++V+K GLK+   + FH           IP+P W+ QIG+    IFYT+++G + Q      V   + F G+    + R   E
Sbjct:   14 VSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKNPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFME 161          
BLAST of EY650168 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 4.582e-12
Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 2
Query:  461 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAENEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHXL-----KQPKIPLPDWVSQIGEXQSSIFYTDQSG 805
            L+ V ++V LPL  V+  N                   V+GV + VWWG+ E +   +Y+W  Y ++ ++V++ GL L   + FH           IP+P WV  IGE    IFYT++SG
Sbjct:   10 LNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSG 129          
The following BLAST results are available for this feature:
BLAST of EY650168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
AMYB_MEDSA2.198e-1435.00Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1[more]
AMYB_VIGUN3.749e-1435.00Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=... [more]
AMYB_HORVU3.749e-1435.90Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1[more]
AMYB_HORSP3.749e-1435.90Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV... [more]
AMYB_MAIZE1.091e-1333.33Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1[more]
AMYB_TRIRP1.425e-1333.33Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1[more]
AMYB_WHEAT2.430e-1334.19Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=... [more]
AMYB_IPOBA5.413e-1329.73Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4[more]
AMYB_SOYBN4.582e-1232.50Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-A06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650168 ID=EY650168; Name=EY650168; organism=Citrus sinensis; type=EST; length=993bp
CCGGTATTTCAAGCTCGACCCACGCGTCCGTTTTTTCCCTGTTCAAATCC
CATAAAACAAACAGCACACAAATCGCCTCTTGTCTCTGACTCTCTCTATA
AATACACGCCCATCATCTTCTCCGTTTCCAAAACACAAGTCAAAAAAGTT
TGCTTTCTATTGCGTTTAATTCGCAGAGCTAGGGTGATTATTGGAAATGG
AGGTTTCTCTGATGGGTAATTCTCAGGCTAATGTTGTTAAGACGGGACTA
CCGTACAGAGACTCGAGGGTTTGTTGTTCGTACAAGAACAAGATTGATGA
TAAGGTCTTGTTCGTTAACCGTGTTAGTTTTCTGGGTCAAAACCGAAGTG
CAAATCTGAGAAAAGCTCAGCTTCGATTTTGCACCAAAGCTTCTGTTCAA
TCTCAACCTCTCCCATCCGACAGAGATTCGGGTCCTTTATCTTCTGCCAG
ACCCAAATCGCTTGATGCTGTAAGATTATTCGTTGGGCTTCCCTTGGATA
CAGTTTCTGATGCCAATACAGTGAACCATGCAAAAGCTATTGCAGCTGGA
CTTAAAGCTTTGAAGCTGTTGGGAGTGGAAGGCGTTGAGCTACCAGTTTG
GTGGGGAGTAGCAGAGAATGAAGCCATGGGAAAGTACAATTGGTCTGGCT
ACCTTGCTGTTGCAGAGATGGTTGAAAAAATAGGTCTCAAGCTTCATGTG
TCACTCTGCTTCCATGNCTTGAAACAGCCAAAAATTCCACTCCCCGATTG
GGTCTCCCAAATTGGTGAGTNCCAATCAAGCATCTTTTACACAGATCAGT
CAGGGCAGCAAATTCAAGGTGCCTATCATTGGCTGGTGATGANTCTNCAG
TNCTTCATGGGAAAACTNNCATTCAGTGTACCAAGAATTTTGCGAGAGCT
TTAAGNCTTCGTTCAAGCCCTTCATGGGCACGANCATTACTGGCATCTCG
ATGGGTCTAGACCANATGTGGAAACTCCGTATCATCTCACACC
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