EY650157

Overview
NameEY650157
Unique NameEY650157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.523e-20
Identity = 59/116 (50.86%), Postives = 74/116 (63.79%), Query Frame = 3
Query:  333 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQKAR G    GFEGGQ P+ RRLPKRGF N F L +  V LGKI   + AGK+D+ + +T   L  AG + ++ +DGVR++G G    K  + LEV+  T  A AAVE AGGSV
Sbjct:   36 KGQKARTGVAIKGFEGGQMPLHRRLPKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGTGELSAK--VTLEVAYATKSAVAAVEKAGGSV 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_ACICJ (50S ribosomal protein L15 OS=Acidiphilium cryptum (strain JF-5) GN=rplO PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.213e-20
Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 3
Query:  333 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQKAR G    GFEGGQ P+ RRLPKRGF N     + P+ +G +A LI +GKID+ + IT  TL+ AG        GVRL+GRG  +I   + +EVS  +  A AA+E AGGSV
Sbjct:   36 KGQKAREGVSLNGFEGGQLPIYRRLPKRGFNNVNRKDYAPLNVGTLAALIESGKIDAGQKITEATLRAAGVYAGSKLAGVRLLGRG--EISQKVEIEVSGASASAIAAIEQAGGSV 149          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_METSB (50S ribosomal protein L15 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplO PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.230e-19
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 3
Query:  333 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQKAR G    GFEGGQ P+ RRLPKRGF NPF L +  + LG++   ++AG+ID   ++T ++L  +G I K   DGV+++G G  K K  +  +V+  +  A AA+EAAGGS+
Sbjct:   36 KGQKARTGVAIKGFEGGQMPLHRRLPKRGFYNPFGLDYNEINLGRLQEAVDAGRIDVAAVVTNESLIASGLISKP-RDGVKILGVGELKAK--LSFQVAAASKSAVAAIEAAGGSI 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.099e-19
Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 3
Query:  333 KGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQ AR  ++  GFEGGQ PM RRLPKRGF N F+L F  + L +I   I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GRG  K K  I++EV   +  A AAVE AGG+V
Sbjct:   36 KGQTARSGVRIKGFEGGQMPMHRRLPKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGRGELKAK--INIEVYGASKSAIAAVEKAGGTV 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.741e-19
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  333 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQKAR G    GFEGGQ P+ RRLPKRGFKN F   + PV LG +   I  GKID+  ++T   L+ AG +G     GVRL+ +G  ++   + +EVS  +  A AAVE AGGSV
Sbjct:   36 KGQKAREGVSLNGFEGGQLPLYRRLPKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAKG--ELARAVTIEVSGASATAVAAVEKAGGSV 149          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.975e-19
Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 3
Query:  333 KGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQ AR  ++  GFEGGQ PM RRLPKRGF N F+L F  + L +I   I+A K+D+  +I  + L  +GA+ ++ +DGVRL+GRG  +I   +++EV   +  A AAVE AGG+V
Sbjct:   36 KGQTARSGVRIKGFEGGQMPMHRRLPKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAEALVKSGAL-RRAKDGVRLLGRG--EITAKVNIEVHGASKSAIAAVEKAGGTV 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_BEII9 (50S ribosomal protein L15 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplO PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.042e-18
Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 3
Query:  333 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQKAR G    GFEGGQ P+ RRLPKRGF NPFS  +  V LG+I   I+AGK++    +T++ L +AG   K   DGV+++G G  K K  +  EV+  +  A AA+E  GGS+
Sbjct:   36 KGQKARTGVAIKGFEGGQMPIHRRLPKRGFWNPFSTDYNEVNLGRIQTAIDAGKLNVALPVTIEALVEAGVCAK-ARDGVKILGNGELKAK--LTFEVASASKTAVAAIEQLGGSI 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_MAGSA (50S ribosomal protein L15 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplO PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.777e-18
Identity = 57/116 (49.14%), Postives = 74/116 (63.79%), Query Frame = 3
Query:  333 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            KGQ +R G    GFEGGQ P+ RRLPKRGF NP +  F  + LG++   I+  +ID+   IT + L  AG IGK + DGVRL+G G  +IK  + +EV+  +  A AAVE AGGSV
Sbjct:   36 KGQTSRTGVAINGFEGGQMPIYRRLPKRGFHNPNAKHFAVINLGRLQKAIDEKRIDAKATITAEILSAAGLIGK-VLDGVRLLGHG--EIKAKVSIEVTGASAAAIAAVEKAGGSV 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_BRUSU (50S ribosomal protein L15 OS=Brucella suis GN=rplO PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.320e-18
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 3
Query:  231 LSLNDLRDKVPR-KQXXXXXXXXXXXXXXXXXXXHKGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            + LNDLRDK    K                     KGQK+R  +   GFEGGQ P+ RRLPKRGF N F+ +F  V LG+I   I+AGK+D+  ++ + +LK AG I ++ +DGVR++  G  K K  +  EV+  +  A   +E AGGS+
Sbjct:    1 MKLNDLRDKPGSVKARKRVGRGIGSGTGKTGGRGVKGQKSRSGVSINGFEGGQMPIYRRLPKRGFTNIFAKSFNVVSLGRIQAAIDAGKLDAKAVVNLDSLKAAGVI-RRAKDGVRILSDGELKAK--VAFEVAGASKAAVEKIEKAGGSI 148          
BLAST of EY650157 vs. ExPASy Swiss-Prot
Match: RL15_BRUSI (50S ribosomal protein L15 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplO PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.320e-18
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 3
Query:  231 LSLNDLRDKVPR-KQXXXXXXXXXXXXXXXXXXXHKGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEVSRVTVRAKAAVEAAGGSV 677
            + LNDLRDK    K                     KGQK+R  +   GFEGGQ P+ RRLPKRGF N F+ +F  V LG+I   I+AGK+D+  ++ + +LK AG I ++ +DGVR++  G  K K  +  EV+  +  A   +E AGGS+
Sbjct:    1 MKLNDLRDKPGSVKARKRVGRGIGSGTGKTGGRGVKGQKSRSGVSINGFEGGQMPIYRRLPKRGFTNIFAKSFNVVSLGRIQAAIDAGKLDAKAVVNLDSLKAAGVI-RRAKDGVRILSDGELKAK--VAFEVAGASKAAVEKIEKAGGSI 148          
The following BLAST results are available for this feature:
BLAST of EY650157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
RL15_XANP25.523e-2050.8650S ribosomal protein L15 OS=Xanthobacter autotrop... [more]
RL15_ACICJ7.213e-2050.0050S ribosomal protein L15 OS=Acidiphilium cryptum ... [more]
RL15_METSB1.230e-1946.5550S ribosomal protein L15 OS=Methylocella silvestr... [more]
RL15_BRASO2.099e-1949.1450S ribosomal protein L15 OS=Bradyrhizobium sp. (s... [more]
RL15_GLUDA2.741e-1949.1450S ribosomal protein L15 OS=Gluconacetobacter dia... [more]
RL15_BRASB7.975e-1947.4150S ribosomal protein L15 OS=Bradyrhizobium sp. (s... [more]
RL15_BEII91.042e-1847.4150S ribosomal protein L15 OS=Beijerinckia indica s... [more]
RL15_MAGSA1.777e-1849.1450S ribosomal protein L15 OS=Magnetospirillum magn... [more]
RL15_BRUSU2.320e-1839.7450S ribosomal protein L15 OS=Brucella suis GN=rplO... [more]
RL15_BRUSI2.320e-1839.7450S ribosomal protein L15 OS=Brucella suis (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-H06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650157 ID=EY650157; Name=EY650157; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGAANAGGGAAAAAAAAAATTCCCAAAAAGGGAGGCGGAAG
AGAGTATCTTCACTTCTCACAACTTCAATCGTCAACAACATTGCAGTAGT
TCGCTCAATACCCACTTTAAACCATAGAGCAGTTCCATTCCAATCCCTTC
AATTTGCACAATGCCCTAATTCAACCCCGAACGAGCAAATTTCGAGTCAA
TTTTTGATGGGCGTTAGGTCTTTTAGCCTATTGAGCTTGAATGATTTGAG
AGACAAAGTGCCTAGAAAGCAAAAGACAAGAAAAGGAAGAGGTATTGGGT
CAGGTAAAGGGAAGACTGCAGGGAGAGGCCACAAGGGACAGAAGGCAAGA
GGGACTATGAAGTTTGGATTTGAAGGTGGTCAAACGCCAATGCGTCGTCG
TTTGCCCAAACGTGGGTTTAAGAACCCTTTTAGCCTCACCTTTCAGCCGG
TAGGTTTGGGAAAGATTGCATATCTAATAAACGCAGGGAAGATAGATTCT
CATGAATTAATTACAATGAAAACTCTCAAGGATGCTGGAGCAATAGGGAA
GCAGATAGAAGATGGAGTAAGATTGATGGGTCGTGGAGCTGAAAAGATCA
AGTGGCCAATTCATCTTGAGGTGTCAAGAGTAACCGTTAGGGCAAAAGCA
GCAGTTGAAGCTGCTGGTGGCTCTGTCANAAGAGTGCATTAAAAACAGCT
GGGTTTGCGGGCATTGCTAAAGCTGGAGTGGTTNGAGAAGAAGGGAAGGN
TGCTGCCANACCANCTAGGCCGNCTNCTAACTGCAGATAAAGTGATAGCA
TTGGGTCGTCTTCTGCACCACCAAACCATTNCATTTTTCNCGAAGAGGGA
GCAGAGCTCCNATCTGCTAGCTATAAATATCAGGTTTGGTGGGTCATCTT
CAGATTGGATTTCACATAATATACCAGGCTGATGATTGATGATT
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