EY650155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650155 vs. ExPASy Swiss-Prot
Match: VPS18_DANRE (Vacuolar protein sorting-associated protein 18 homolog OS=Danio rerio GN=vps18 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 7.452e-28 Identity = 67/191 (35.08%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 72 VKPGSMAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRD-PLQRDQVYLVHAEAAFATKDFHRAASFYAKI-NYILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRL 638 VKP S+ ++++HFLLL+ ++V+ + ++ Q++ E F + ++ + I D G+ + Y + ++F+ + E RD+W++Y++M ++ A C+D P D V AE F K + +A YA NY FEEI LKFI +++AL+ FL++KL NL +K QIT++ TW TELYL+++ +L Sbjct: 323 VKPISIVLTQFHFLLLLPDRVRGICTLNGQVVHEDVFPEKFGTLQKMI----KDPITGLVWIYTEKAVFRYHIQKEARDVWQMYMNMNKFDLAKEYCKDRPECLDMVLAKEAEHCFQNKRYLESAKCYALTQNY---FEEIALKFIEAKQEEALKEFLIKKLVNLKPSEKTQITLLVTWLTELYLNRLGQL 506
BLAST of EY650155 vs. ExPASy Swiss-Prot
Match: VPS18_HUMAN (Vacuolar protein sorting-associated protein 18 homolog OS=Homo sapiens GN=VPS18 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 5.904e-25 Identity = 69/214 (32.24%), Postives = 117/214 (54.67%), Query Frame = 3 Query: 18 CGK-QALLSYSKLSEGAEAVKPGS-----MAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRD-PLQRDQVYLVHAEAAFATKDFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRL 638 CG+ +LLS ++ E E V PG+ + ++++HFLLL+ ++V+ V ++ Q++ F + + + D++ G +AY + ++F+ V E RD+W+ YLDM + A CR+ P D V A+ F + + +A YA FEEI LKF+ +++AL FL RKL +L ++ Q T+++TW TELYL ++ L Sbjct: 299 CGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLKH----MVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSY--FEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGAL 506
BLAST of EY650155 vs. ExPASy Swiss-Prot
Match: VPS18_MOUSE (Vacuolar protein sorting-associated protein 18 homolog OS=Mus musculus GN=Vps18 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 8.526e-24 Identity = 69/219 (31.51%), Postives = 116/219 (52.97%), Query Frame = 3 Query: 18 CGK-QALLSYSKLSEGAEAVKPGS-----MAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRD-PLQRDQVYLVHAEAAFATKDFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLEDD 653 CG+ +LLS ++ E V PG+ + ++++HFLLL+ ++V+ V ++ Q++ F + + + D++ G +AY + ++F+ V E RD+W+ YLDM + A CR+ P D V A+ F + +A YA FEEI LKF+ +++AL FL RKL L ++ Q T+++TW TELYL ++ L + D Sbjct: 299 CGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLRH----MVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSY--FEEIALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPD 511
BLAST of EY650155 vs. ExPASy Swiss-Prot
Match: PEP3_SCHPO (Vacuolar membrane protein pep3 OS=Schizosaccharomyces pombe GN=pep3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.034e-17 Identity = 59/207 (28.50%), Postives = 109/207 (52.66%), Query Frame = 3 Query: 84 SMAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVHAEAAFATKDFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLEDDTAL--ENRKSEYQSIMR 698 +M ++ +H L + + +VNR++ + E + + S I+GLC D ++ Y +S+ ++ VN+E R+ V+L+ ++ AL R+ V + +AE +++ RAA+ YA+ + S EE+ LKFI ++++D LR +L +KL + K Q +++ W EL L K+N L ++ L EN + Q + R Sbjct: 307 NMILTSFHLAFLDLDTLYIVNRVNGK---ESYQQRVNLSPHEEILGLCCDHEKNTYWLYTTDSLHELVVNNETREASLVFLEKGDFEKALECANTAKVRNTVLVGYAEFLMEHEEYERAATLYAET--LKSVEEVALKFIELNQKDVLRLYLWKKLRSYKSTMKIQKSLLVNWLLELMLAKLNSLDEKERLELFPENVMQQRQQVQR 508
BLAST of EY650155 vs. ExPASy Swiss-Prot
Match: VPS18_DROME (Vacuolar protein sorting-associated protein 18 homolog OS=Drosophila melanogaster GN=dor PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 5.010e-16 Identity = 58/217 (26.73%), Postives = 108/217 (49.77%), Query Frame = 3 Query: 78 PGSMAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALAN-CRDPLQRDQVYLVHAEAAFATKDFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKL----------DNLAKDDKCQITMISTWATELYLDKINRLLLEDDTALENRKSEYQSIM 695 P + ++EYH +LL + V+ + ++++ + + FD+ + + D G Y Y ++F + V E R++W++YLD +Y A A+ DP V A+AAFA + AA +YA+ + SFEE+ LKF+ + ++ + ++ ++L D L +D I + W +LYL +IN + +D+ + ++EY M Sbjct: 353 PKAFVLTEYHAVLLYADHVRAICLLNQEQVYQEAFDEARVGKP---LSIERDELTGSIYVYTVKTVFNLRVTREERNVWRIYLDKGQYELATAHAAEDPEHLQLVLCQRADAAFADGSYQVAADYYAETD--KSFEEVCLKFMVLPDKRPIINYVKKRLSRVTTKPMETDELDEDKMNIIKALVIWLIDLYLIQIN-MPDKDEEWRSSWQTEYDEFM 563 The following BLAST results are available for this feature:
BLAST of EY650155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650155 ID=EY650155; Name=EY650155; organism=Citrus sinensis; type=EST; length=967bpback to top |