EY650153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.364e-59 Identity = 69/103 (66.99%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANPPCV 581 LSDE+L KEI YL+R+ WIPCLEFELE G+VYREHH+ PG+Y GRYWTMWKLPM+GCTD+ V+ EVGE + EYP++F+R+IGFDN+R+ QCI + A PP V Sbjct: 78 LSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180 HSP 2 Score: 88.9669 bits (219), Expect = 1.364e-59 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 53 SSTTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLP 268 SS+ +AT NR + AS+ APFTGLKS+ AFP NND + + SN R QCM VWPP GL K++TLSYLP Sbjct: 5 SSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLP 76
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 5.596e-58 Identity = 62/100 (62.00%), Postives = 81/100 (81.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 L++E L KE+ YL+R GWIPCLEFELEKG+VYRE+H PG+Y GRYWTMW+LP++G TD++ VL E+ + + EYP SF+RIIGFDN+R+ QCI +A P Sbjct: 78 LTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177 HSP 2 Score: 97.8265 bits (242), Expect = 5.596e-58 Identity = 48/72 (66.67%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 53 SSTTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLP 268 SS V T NRAS A A++VAPFTGLKSS+ FP TNNDIT IASN R CM VWPP G KF+TLSYLP Sbjct: 5 SSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLP 76
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.582e-57 Identity = 64/101 (63.37%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANPP 575 LS ESL K+I YL+ GWIPCLEFELE +VYRE++ PG+Y GRYW MWKLPM+GCTDAT VL E+ E YP S +RIIGFDN R+ QCI +A PP Sbjct: 80 LSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180 HSP 2 Score: 102.449 bits (254), Expect = 3.582e-57 Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 2 Query: 53 SSTTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLP 268 SS TVAT +RA+ A A+MVAPFTGLKS++AFPA +NNDIT +ASN R QCM VWPP GL KF+TLSYLP Sbjct: 7 SSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLP 78
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.348e-56 Identity = 59/100 (59.00%), Postives = 80/100 (80.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 +S+E L KE YLLR+GW+PC+EF++ G+VYRE+H PGFY GRYWTMWKLPM+GCTD++ V+ E+ E + EYP +F+R+IGFDN+R+ QCI +A P Sbjct: 80 MSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179 HSP 2 Score: 95.1301 bits (235), Expect = 1.348e-56 Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 2 Query: 53 SSTTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLPN 271 SS VA+ N AS A ASMVAPFTGLKSS+ FP N DIT +ASN + QCM VWPP GL KF+TLSYLP+ Sbjct: 7 SSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPD 79
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.294e-56 Identity = 68/100 (68.00%), Postives = 81/100 (81.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 LS E LL EI YLL+SGW+PCLEFE E+G+VYREHH+ PG+Y GRYWTMWKLPM+GCTDAT VL EV E + YP ++VRIIGFDN+R+ QCI +A P Sbjct: 78 LSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKP 177 HSP 2 Score: 85.1149 bits (209), Expect = 2.294e-56 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 2 Query: 59 TTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLPN 271 ++ A A R+++A A+MVAPFTGLKS+++FP + N DIT IASN R QCM VWPP K++TLSYLP+ Sbjct: 7 SSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPD 77
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.898e-56 Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANPPCV 581 LS E L KE+ YLLR IPCLEFELE G+VYREH+ PG+Y GRYWTMWKLPM+GC D++ VL E+ E + YP +F+RIIGFDN R+ Q I +A PP V Sbjct: 80 LSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182 HSP 2 Score: 100.138 bits (248), Expect = 3.898e-56 Identity = 51/72 (70.83%), Postives = 55/72 (76.39%), Query Frame = 2 Query: 53 SSTTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLP 268 SS TVA +RAS A +SMVAPFT LKS+SAFP TNNDIT IASN R QCM VWPP GL KF+TLSYLP Sbjct: 7 SSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLP 78
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.082e-56 Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 LS ESL KE+ YLLR W+PCLEFELE G+VYRE+H PG+Y GRYWTMWKLPM+GCTD++ VL E+ E + YP SF+RIIGFDN+R+ QCI +A P Sbjct: 81 LSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180 HSP 2 Score: 88.1965 bits (217), Expect = 5.082e-56 Identity = 50/74 (67.57%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 53 SSTTVAT--ANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLP 268 SS TVAT A+R + A A MVAPF GLKSSSAFP +N DIT IASN R QCM VWPP GL KF+TLSYLP Sbjct: 7 SSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLP 79
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 6.627e-56 Identity = 66/100 (66.00%), Postives = 82/100 (82.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 LSDE LLKE+ YLL++GW+PCLEFE E G+VYREH++ PG+Y GRYWTMWKLPM+GCTD T VL EV E +N YP +++RIIGFDN+R+ QCI +A P Sbjct: 79 LSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKP 178 HSP 2 Score: 84.3445 bits (207), Expect = 6.627e-56 Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 2 Query: 59 TTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNN-DITFIASNC*RGQCMNVWPPTGLNKFDTLSYLPN 271 ++ A A R+++A ASMVAPFTGLKS+++FP NN DIT +ASN R +CM VWPP + K++TLSYLP+ Sbjct: 7 SSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPD 78
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.468e-55 Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 LS ESL KE+ YLLR W+PCLEFELE G+VYRE+H PG+Y GRYWTMWKLPM+GCTD++ VL E+ E + YP SF+RIIGFDN+R+ QCI +A P Sbjct: 81 LSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180 HSP 2 Score: 87.0409 bits (214), Expect = 1.468e-55 Identity = 50/74 (67.57%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 53 SSTTVAT--ANRASLAHASMVAPFTGLKSSSAFPAANNTNNDITFIASNC*RGQCMNVWPPTGLNKFDTLSYLP 268 SS TVAT A+R + A A MVAPFTGLKSSSA P +N DIT IASN R QCM VWPP GL KF+TLSYLP Sbjct: 7 SSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLP 79
BLAST of EY650153 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.468e-55 Identity = 66/100 (66.00%), Postives = 81/100 (81.00%), Query Frame = 3 Query: 273 LSDESLLKEISYLLRSGWIPCLEFELEKGWVYREHHN*PGFYYGRYWTMWKLPMYGCTDATHVLNEVGEVQNEYPHSFVRIIGFDNMREAQCIILLAANP 572 LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE+H PG+Y GRYWTMWKLPM+GCTDAT VL EV E + YP +++RIIGFDN+R+ QCI +A P Sbjct: 79 LSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 178 HSP 2 Score: 84.3445 bits (207), Expect = 1.468e-55 Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 2 Query: 59 TTVATANRASLAHASMVAPFTGLKSSSAFPAANNTNN-DITFIASNC*RGQCMNVWPPTGLNKFDTLSYLPN 271 ++ A A R+++A ASMVAPFTGLKS+++FP NN DIT +ASN R +CM VWPP + K++TLSYLP+ Sbjct: 7 SSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPD 78 The following BLAST results are available for this feature:
BLAST of EY650153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650153 ID=EY650153; Name=EY650153; organism=Citrus sinensis; type=EST; length=954bpback to top |