EY650146

Overview
NameEY650146
Unique NameEY650146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650146_ssr598 microsatellite EY650146_ssr598:598..609. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 2.081e-56
Identity = 130/249 (52.21%), Postives = 152/249 (61.04%), Query Frame = 1
Query:   13 TDRNSGCGSFLRGIDVNQAPT--VADCEEEN-GVXXXXXXXXXXX-GKRSEREPIG----------DETEAERASCS----RXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIGPNHQRLTPVSPWAALPI 705
            ++RNS   SFLRGIDVN+AP+  V D E+E  GV            GK+SERE +           ++ E ERASCS                  RKKLRLSKEQ+L+LEETFKEHST               R RQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT+ENRRLQKEV EL +LKLSP LYM+M PPTTLTMCPSCER              + +   P+  +   + P+SPWAA+P+
Sbjct:   66 SERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCER--------VAVTSSSSSVAPPVMNSSSPMGPMSPWAAMPL 306          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.033e-55
Identity = 128/245 (52.24%), Postives = 143/245 (58.37%), Query Frame = 1
Query:   16 DRNSGCGSFLRGIDVNQAPT---VADCEEENGVXXXXXXXXXXXGKRSEREPI---GDETEAERASCSRXXXXXXXXXXXXX-----RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIGPNHQRLTPVSPWAALPIHXPS 717
            +RNS  GSFLRG +VN+A +   V D EEE  V                   +   GDE EAERASCSR                  RKKLRLSK+Q+L+LEETFKEHST               R RQVEVWFQNRRARTKLKQTEVDCEYLKRCC+NLTEENRRLQKEV EL +LKLSP LYM+M PPTTLTMCPSCER                T  +   P+ QRLT   PW A+ +   S
Sbjct:   75 ERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLT---PWTAISLQQKS 316          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.218e-49
Identity = 106/183 (57.92%), Postives = 122/183 (66.67%), Query Frame = 1
Query:   37 SFLRGIDVNQAPTVADC-EEENGVXXXXXXXXXXXGKRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCE 582
            +F+RGIDVN+ P+ A+  +E+ GV           GKRSERE   D   +   S                RKKLRLSK+QS +LEETFK+HST               R RQVEVWFQNRRARTKLKQTEVDCE+L+RCCENLTEENRRLQKEV EL +LKLSPQ YM+M+PPTTLTMCPSCE
Sbjct:   66 TFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQGSRGISDDEDGDNS--------RKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCE 240          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.350e-46
Identity = 108/194 (55.67%), Postives = 115/194 (59.28%), Query Frame = 1
Query:   37 SFLRGIDVNQAPTVADCEEENGVXXXXXXXXXXX-GKRSEREPIG----------DETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCER 585
            S LR IDVN  P+  +CEE+ GV            GKRSERE I           DE   +R   SR             RKKLRLSK+QS  LEETFKEH+T                 RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRLQKE  EL +LKLSPQ Y  M PPTTL MCPSCER
Sbjct:   50 SDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGY-SRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCER 242          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.809e-45
Identity = 113/228 (49.56%), Postives = 127/228 (55.70%), Query Frame = 1
Query:   40 FLRGIDVNQAPTVADCEEENGVXXXXXXXXXXX-GKR--SEREPI-----GDETEA--ERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIGPNH-QRLTPVSPW 690
            FLR IDVN  PT  D EEE GV            GKR  +ERE       GD+ +   +R+S                RKKLRLSK+QS +LE+TFKEH+T                 RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRL+KE  EL +LKLSP+LY  M+PPTTL MCPSCER                    P   NH QR   +SPW
Sbjct:   56 FLRKIDVNSLPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCERVAG-----------------PSSSNHNQRSVSLSPW 266          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.310e-42
Identity = 86/115 (74.78%), Postives = 94/115 (81.74%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKL-SPQLYMNMNPPTTLTMCPSCER 585
            RKKLRLSK+QS +LE++F+EH T               RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRLQKEVQEL +LKL SP LYMNM+PPTTLTMCPSCER
Sbjct:   81 RKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCER 195          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.310e-42
Identity = 86/115 (74.78%), Postives = 94/115 (81.74%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKL-SPQLYMNMNPPTTLTMCPSCER 585
            RKKLRLSK+QS +LE++F+EH T               RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRLQKEVQEL +LKL SP LYMNM+PPTTLTMCPSCER
Sbjct:   81 RKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCER 195          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 3.226e-41
Identity = 91/148 (61.49%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  142 KRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCER 585
            +RS +  I DE E    S SR             RKKLRLSK+QS  LE++FKEHST               RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE+LTEENRRLQKEV+EL +LK S   YM + P TTLTMCPSCER
Sbjct:  158 RRSNKRDIDDEVER---SASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQL-PATTLTMCPSCER 301          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.312e-39
Identity = 88/153 (57.52%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  145 RSEREPIGDETE------AERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCER 585
            + ERE  G + E       ER  CSR             RKKLRL+K+QS LLE+ FK HST               RPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE LT+ENRRLQKE+Q+L +LKLS   YM+M P  TLTMCPSCER
Sbjct:   86 KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHM-PAATLTMCPSCER 237          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.147e-38
Identity = 91/164 (55.49%), Postives = 101/164 (61.59%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRL-PIGPNHQRLTPVS---PWAALPIHXPSYY 723
            RKKLRLSKEQS  LEE+FKEHST               RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE LTEENRRLQKE+ EL +LK     YM++ P TTL+MCPSCER                +T   P  P+   +   S     AA P H PS +
Sbjct:  176 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHL-PATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAATSSSAAAAAAPDHRPSSF 338          
The following BLAST results are available for this feature:
BLAST of EY650146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
HAT3_ARATH2.081e-5652.21Homeobox-leucine zipper protein HAT3 OS=Arabidopsi... [more]
ATHB4_ARATH1.033e-5552.24Homeobox-leucine zipper protein ATHB-4 OS=Arabidop... [more]
HAT4_ARATH3.218e-4957.92Homeobox-leucine zipper protein HAT4 OS=Arabidopsi... [more]
HAT2_ARATH4.350e-4655.67Homeobox-leucine zipper protein HAT2 OS=Arabidopsi... [more]
HAT1_ARATH4.809e-4549.56Homeobox-leucine zipper protein HAT1 OS=Arabidopsi... [more]
HOX17_ORYSJ1.310e-4274.78Homeobox-leucine zipper protein HOX17 OS=Oryza sat... [more]
HOX17_ORYSI1.310e-4274.78Homeobox-leucine zipper protein HOX17 OS=Oryza sat... [more]
HAT14_ARATH3.226e-4161.49Homeobox-leucine zipper protein HAT14 OS=Arabidops... [more]
HAT22_ARATH2.312e-3957.52Homeobox-leucine zipper protein HAT22 OS=Arabidops... [more]
HOX11_ORYSJ1.147e-3855.49Homeobox-leucine zipper protein HOX11 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650146 ID=EY650146; Name=EY650146; organism=Citrus sinensis; type=EST; length=926bp
TAATTATGCTTTACAGATCGAAACTCAGGATGCGGATCATTCCTTAGAGG
AATAGATGTGAATCAGGCACCAACAGTGGCAGATTGCGAGGAAGAAAATG
GGGTTTCATCACCAAACAGCACTGTTTCTAGCATAAGTGGAAAGAGGAGT
GAGAGAGAGCCCATTGGAGATGAGACTGAGGCTGAAAGAGCGTCTTGCTC
TCGCGGCAGTGACGACGAAGACGGTGGCGCTGGTGATGCATCAAGAAAGA
AGCTGAGATTGTCGAAAGAACAGTCTTTGTTGCTTGAAGAGACCTTCAAA
GAGCATAGCACTCTCAATCCTAAGCAAAAGTTGGCTTTGGCAAAGCAGTT
GAATCTTAGGCCTAGACAAGTAGAAGTGTGGTTTCAGAACAGAAGGGCAA
GGACAAAGTTGAAGCAAACAGAGGTTGATTGTGAGTACTTAAAGAGATGC
TGCGAGAATCTAACGGAGGAGAACAGGAGATTGCAGAAGGAAGTGCAAGA
GCTTANATCATTGAAGCTTTCTCCTCAACTCTACATGAATATGAATCCTC
CCACGACACTCACAATGTGTCCCTCCTGTGAGCGTGTGGCTGTATCATCG
TCGTCGTCGTCATCCTCTGCTGCTGCCAACGGCACCACCCGTCTNCCCAT
TGGTCCTAACCATCAACGACTGACTCCAGTGAGCCCTTGGGCAGCATTAC
CAATCCACCNACCGTCGTATTATCAGCTTGGAATAAGGGCATTGTNCGTA
AAGAAGTAATTNGNNTATTANAAAGAGAGTANTAGGTTNGATNNTTGTTG
TATTATAACTGAAGGCTNCTGGGGTATACTGAGGATGCTCGTGTGACTAN
TGGNATTANGGGATATGGGNAGGACACCCTCTGTGGTCAATGAGCTANCA
TGAACATTTTGGGATCAGAAATGATT
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