EY650144

Overview
NameEY650144
Unique NameEY650144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6959 contig Csv1_Contig6959:1..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650144 vs. ExPASy Swiss-Prot
Match: GUN6_ARATH (Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.076e-31
Identity = 60/97 (61.86%), Postives = 81/97 (83.51%), Query Frame = 2
Query:    2 SSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLPAGKSLEFVYIHTANAADVSVSAYTLA 292
            +SG +AI QK+T+SW+S G+ YYRYST V NKS++ LK+L LSI  LYGP+WGL+  GN++G PSW+++LP+GKSLEFVYIH+   A+V+VS+YTLA
Sbjct:  524 ASGPVAIVQKITSSWVSKGRTYYRYSTTVINKSSRPLKSLNLSIKNLYGPIWGLSRSGNSFGLPSWMHSLPSGKSLEFVYIHSTTPANVAVSSYTLA 620          
BLAST of EY650144 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.089e-31
Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 2
Query:    2 SSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLPAGKSLEFVYIHTANAADVSVSAYTL 289
            S   I I QK+T SW + GK YYRYSTI+TN+S KTLK LK+SI+KLYGP+WG+T  GN++ FPSW+ +LP+GKS+EFVYIH+A+ ADV VS Y+L
Sbjct:  530 SPSPITISQKMTNSWKNEGKVYYRYSTILTNRSTKTLKILKISITKLYGPIWGVTKTGNSFSFPSWMQSLPSGKSMEFVYIHSASPADVLVSNYSL 625          
BLAST of EY650144 vs. ExPASy Swiss-Prot
Match: GUN2_ORYSJ (Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18
Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 2
Query:   14 IAIQQKLTTSWISNGKRYYRYSTIVTNKS---AKTLKNLKLSISKLYGPLWGLTNLGN-AYGFPSWLNNLPAGKSLEFVYIHTANAADVSVSAYTL 289
            + I+QK T SW  +G+ Y+RY+  V+N+S    KT++ L + I KLYGP+WGL       Y  PSW  +LPAG+S  FVY+H A  ADV V+ Y L
Sbjct:  544 VEIEQKATASWEKDGRTYHRYAVTVSNRSPAGGKTVEELHIGIGKLYGPVWGLEKAARYGYVLPSWTPSLPAGESAAFVYVHAAPPADVWVTGYKL 639          
BLAST of EY650144 vs. ExPASy Swiss-Prot
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    2 SSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGF--PSWLNNLPAGKSLEFVYIHTANAADVSVSAY 283
            S   I     +T++WI+   RYYR+  I+ N S K + +LKL I  L GP+WGL   G  Y +  P W   L AG++ +FVY+     A VSV +Y
Sbjct:  531 SGAQIEFLHSITSNWIAGNTRYYRHKVIIKNNSQKPISDLKLKIEDLSGPIWGLNPTGQKYTYQLPQWQKTLRAGQAYDFVYVQGGPQAKVSVLSY 626          
BLAST of EY650144 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 2
Query:   11 AIAIQQKLTTSWISNGKRYYRYSTIVTNKS-AKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLPAGKSLEFVYIHTANA-ADVSVSAYTL 289
            AI I+Q +T +W    + YYRY+  VTN+S  KT++ L L +S L G LWGL      Y  P WL  L  G+SL FVY+  A A A++ V+ Y L
Sbjct:  534 AIGIEQNVTGTWARRRRTYYRYAVTVTNRSRGKTVRELHLGVSGLRGRLWGLEEARYGYVPPRWLPALRPGRSLRFVYVQPAPAPANIWVTGYKL 628          
The following BLAST results are available for this feature:
BLAST of EY650144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GUN6_ARATH1.076e-3161.86Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g643... [more]
GUN19_ARATH4.089e-3163.54Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11... [more]
GUN2_ORYSJ3.969e-1846.88Endoglucanase 2 OS=Oryza sativa subsp. japonica GN... [more]
GUN5_ARATH2.662e-1439.58Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g489... [more]
GUN15_ORYSJ3.845e-1344.21Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650144 ID=EY650144; Name=EY650144; organism=Citrus sinensis; type=EST; length=797bp
ATCATCTGGTGCTATTGCCATACAGCAGAAGCTGACAACTTCTTGGATCT
CCAATGGAAAAAGGTACTACAGATATTCGACCATAGTGACCAACAAGTCA
GCCAAGACCCTCAAGAATCTGAAGCTTTCAATATCCAAGCTGTATGGTCC
TCTATGGGGTCTAACAAATCTTGGCAATGCTTATGGTTTCCCATCATGGC
TCAACAACTTGCCTGCTGGAAAAAGTCTTGAATTCGTCTACATCCATACT
GCTAATGCTGCAGATGTCTCAGTTTCTGCTTACACATTGGCATAAAAAAG
AAAAACAACTATTACACATAAAGAATCTCATGGTTTCTGGGTTTGTAATG
TAAGAATTGTGCAGTTATTATACAGAAAGCAGTCCAGAAAAGGGTTTCTT
TTTATTTTCCTTTTCTTTGAGGGGAGGGGGGACTTTCAACTTTTCTTGTT
GATTTGGTATCTTGTGTTAGTGGTTTTAGACGATATTAGGTTAAATAAGG
TCGAAGATTTGAGGATGAAAGGAGAGAAGAGACAATTTAAAGCAAGTGCT
CATCCTCTNTCTCCTCCATTTCTATGGTTNTATCGGATAGAGACAGGTAA
AGAGTGAGAATTGAGGAGTGGTCAAGAAAAATGACTACTCANNATATATT
GCAAGGGATCTTTNCTTTTCTTTCCTTTTGGATTTTAAACAGCTTTGAAA
CGTCTGTTTTCCTTTTTTTTGGTGGTGGGAGTNGTAAAGCTTTGCACATT
TATATTTNCATATGATATAGTTTGTGCATCACATTAAAAAAAAAAAA
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