EY650140

Overview
NameEY650140
Unique NameEY650140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8300 contig Csv1_Contig8300:344..1209. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.943e-38
Identity = 96/273 (35.16%), Postives = 142/273 (52.01%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWW--DAIVGMYGYIACGGCPKTWTGFYMEALSDRWELGKLSAASGVMLCLE-----NXVYLSLRLMTGNLDMQNCTGCFVYMRVNNAGELHDALSLSAGTGGRRTNDLVAG 802
            F GHLG L+    SIA   +    +G++LGMASA++T+CGQA+GA++Y  +G+  QR+             L  ++  +LK +GQ   +A      +  ++P    FAL   MQRFL++Q     +A++SL   L+H ++TWL    +  GL+G  + LSFSWW   A+ GMY  +    C +TWTGF   A    W   KL+ AS VMLCLE       V +S  L    + +   + C  Y+      ++   L LSA    R +N+L AG
Sbjct:   79 FTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMY-ILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLN----WDMQFMLGLSAAISVRVSNELGAG 346          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.000e-15
Identity = 58/228 (25.44%), Postives = 107/228 (46.93%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGCPK-TWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMTGNLDM 685
            F GHLG LE  A+++A  V+      +  G++SA +TL  Q +G++    +GV +QR              L +    +L L  Q  DV++L+    +  +P      L     ++L +Q   +      +A+ LV+ +  ++ +Y + LG++G+ +  + S +   + ++ YI      + TW G+  E L D     +L+  S +MLC+E   Y     ++G L M
Sbjct:   62 FCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGM 289          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 60/228 (26.32%), Postives = 108/228 (47.37%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGCPK-TWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMTGNLDM 685
            F GHLG LE  A+++A  V+      +  G++SA +TL  Q +G++    +GV +QRS             L +    +L L  Q  DV++L+       +P      L     ++L +Q   +      +A+ LV+ +  +L ++++ LG+IG+ +    S +   + ++ YI      + TW G+ +E L D     +L+  S +MLC+E   Y     ++G L M
Sbjct:   62 FCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGM 289          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.328e-14
Identity = 58/228 (25.44%), Postives = 107/228 (46.93%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGC-PKTWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMTGNLDM 685
            F GHLG LE  A+++A  V+      +  G++SA +TL  Q +G++    +GV +QR              L +    +L L  Q  DV++L+    +  +P      L     ++L +Q   +      +A+ LV+ +  +L ++++ LG++G+ +  + S +   + ++ YI        TW G+  E L D     +L+  S +MLC+E   Y     ++G L M
Sbjct:   61 FCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGM 288          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.328e-14
Identity = 60/228 (26.32%), Postives = 106/228 (46.49%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGCPK-TWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMTGNLDM 685
            F GHLG LE  A+++A  V+      +  G++SA +TL  Q +G++    +GV +QRS             L +    +L L  Q  DV++L+       +P      L     ++L +Q   +      +A+ LV+ +  +L ++++ LG IG+ +    S +   + ++ YI      + TW G+ +E L D      L+  S +MLC+E   Y     ++G L M
Sbjct:   62 FCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGM 289          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.509e-13
Identity = 57/228 (25.00%), Postives = 105/228 (46.05%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGC-PKTWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMTGNLDM 685
            F GHL  LE  A+++A  V+      +  G++SA +TL  Q +G++    +GV +QR              L +    +L L  Q   V++L+       +P      L     ++L +Q   +      +A+ LV+ +  +L VY++ LG++G+ +  + + +   + ++ YI        TW G+ +E L D     +L+  S +MLC+E   Y     ++G L M
Sbjct:   61 FCGHLSKLELNAVTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGM 288          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.779e-13
Identity = 62/226 (27.43%), Postives = 103/226 (45.58%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSG---GVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIG------------TTITLSFSWWDAIVGMYGYIACGGCPKTWTGFYMEALSDRWELGKLSAASGVMLCLE 637
            F GHLG +E  A+++A +VV      +  G+ASA +TL  Q+FG K    +GV +QR              + +    +L LL Q  DVA+L+     + +  LP   +F LQ    R+L+SQ   M    V +A+ +V++ +    +Y + LG++G            + +   + WW  I     +I       TW G+  E   +     +L+  S  M+C+E
Sbjct:   71 FCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQ---TRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRI-----HI------HTWGGWTRECFQEWSSYTRLAIPSMFMVCIE 282          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12
Identity = 56/219 (25.57%), Postives = 100/219 (45.66%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSG---GVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGCPK-TWTGFYMEALSDRWELGKLSAASGVMLCLENXVY 649
            F GHLG  E   +++A  V+      +  G+ASA +TL  Q FG+     +GV +QR              L +    +L  + Q  +VA LS     + +  LP   ++ LQ    R+L++Q           A  +++ ++ ++ ++ ++LG+ G+    + S +   V +Y YI      K TW G+  + L +     +L+  S +MLC+E   Y
Sbjct:   80 FCGHLGKTELAGVALAIAVINVTGISIGSGLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPAAFMYQLQ---GRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTY 295          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.716e-12
Identity = 53/222 (23.87%), Postives = 99/222 (44.59%), Query Frame = 2
Query:   11 GHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYK--MQLGLIGTTITLSFSWWDAIVGMYGYIACGGCPKTWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMT 670
            GHLG  E  A S++N       F +  G+ SAL+T+  Q+FG+  Y M+G+++QR              +      +L  L Q       +      ++     +AL   ++RFL+ Q     + ++    + +++ + +L V+   +  G +G  + ++ + W A   +  YI      + W GF  EAL +   L +L+    +M+C E   Y +  L+T
Sbjct:  126 GHLGKTELAAASLSNMTATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYIMKVNGRQAWGGFSREALKNWGPLCRLAVPGVIMICSE---YWAFELVT 344          
BLAST of EY650140 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.716e-12
Identity = 53/228 (23.25%), Postives = 102/228 (44.74%), Query Frame = 2
Query:    5 FAGHLGDLERGAISIANTVVVAFNFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWXXXXXXXXXXXPLDVFASTVLKLLGQPDDVAQLSGGVSLWLLPDHSIFALQFTMQRFLESQLTTMAIAWVSLASLLVHLMVTWLSVYKMQLGLIGTTITLSFSWWDAIVGMYGYIACGGC-PKTWTGFYMEALSDRWELGKLSAASGVMLCLENXVYLSLRLMTGNLDM 685
            F GHLG +E  A+S+A T++      +  G+A A +TL  Q FG     ++G+ +QR              L +   ++L L  Q  +V++L+    L  LP      L   + ++L++Q            + + + +  ++ +Y + LG++G+    + S +  ++ ++ YI        TW G+      +     +L+ AS +MLC+E   +     + G L M
Sbjct:   76 FCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGM 303          
The following BLAST results are available for this feature:
BLAST of EY650140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TT12_ARATH3.943e-3835.16Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
S47A1_MOUSE8.000e-1525.44Multidrug and toxin extrusion protein 1 OS=Mus mus... [more]
S47A1_HUMAN1.045e-1426.32Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]
S47A1_RAT2.328e-1425.44Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
S47A1_PONAB2.328e-1426.32Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]
S47A1_RABIT1.509e-1325.00Multidrug and toxin extrusion protein 1 OS=Oryctol... [more]
S47A2_MOUSE9.779e-1327.43Multidrug and toxin extrusion protein 2 OS=Mus mus... [more]
S47A1_DANRE2.179e-1225.57Multidrug and toxin extrusion protein 1 OS=Danio r... [more]
YJ2D_SCHPO3.716e-1223.87Uncharacterized transporter C4B3.13 OS=Schizosacch... [more]
S47A1_XENTR3.716e-1223.25Multidrug and toxin extrusion protein 1 OS=Xenopus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-F12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650140 ID=EY650140; Name=EY650140; organism=Citrus sinensis; type=EST; length=866bp
AGCATTTGCTGGTCATTTGGGTGATCTTGAGCGGGGTGCCATCTCCATTG
CCAATACTGTGGTCGTTGCTTTTAACTTCGGCCTCTTGCTGGGAATGGCA
AGTGCGTTAGAAACTCTGTGTGGGCAAGCTTTTGGGGCCAAAAAGTATTA
CATGTTGGGCGTCTACATGCAACGTTCATGGATTGTGCTTTGCATATGCT
GTGTTCTGCTTTTGCCTCTGGATGTTTTTGCCTCTACAGTATTGAAGCTA
TTGGGCCAACCGGATGACGTGGCACAGCTGTCTGGGGGTGTCTCTCTATG
GTTGCTACCAGATCATTCCATCTTTGCTTTACAGTTTACTATGCAAAGAT
TCTTGGAAAGCCAGCTTACGACTATGGCGATTGCATGGGTTTCTTTGGCG
TCTCTGTTGGTACATCTTATGGTGACTTGGCTGTCTGTGTACAAAATGCA
ACTTGGTTTGATTGGCACAACCATCACTTTGAGTTTTTCCTGGTGGGATG
CGATTGTTGGGATGTATGGATACATTGCTTGCGGTGGGTGTCCTAAAACA
TGGACTGGATTCTACATGGAAGCATTGTCTGATCGCTGGGAGTTAGGAAA
ACTCTCTGCTGCTTCTGGTGTCATGCTCTGCTTGGAGAACTNGGTCTACT
TATCATTAAGATTGATGACAGGAAATCTTGATATGCAAAATTGCACAGGA
TGCTTTGTCTATATGCGTGTCAATAATGCGGGGGAACTGCACGATGCTTT
ATCCCTCTCTGCTGGAACTGGGGGGAGGCGCACAAATGATCTAGTAGCTG
GTATGGGCGAAAGGCCGAGATCGCTCGATCGCATCAGTGTGACGGCGATC
GCATTGAAGCTTGTTG
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