EY650135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY650135 vs. ExPASy Swiss-Prot
Match: SF3B1_HUMAN (Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3) HSP 1 Score: 315.464 bits (807), Expect = 2.403e-85 Identity = 151/187 (80.75%), Postives = 168/187 (89.84%), Query Frame = 1 Query: 7 VRIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLADEQSNVYSRPEL 567 V IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G +L YCLQGLFHPARKVR+VYWKIYNS+YIG+QDAL+A YP + ++ N Y R EL Sbjct: 1114 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYEL 1300
BLAST of EY650135 vs. ExPASy Swiss-Prot
Match: SF3B1_XENLA (Splicing factor 3B subunit 1 OS=Xenopus laevis GN=sf3b1 PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 3.139e-85 Identity = 150/187 (80.21%), Postives = 169/187 (90.37%), Query Frame = 1 Query: 7 VRIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLADEQSNVYSRPEL 567 V IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G ++ YCLQGLFHPARKVR+VYWKIYNS+YIG+QDAL+A YP + +++ N Y R EL Sbjct: 1117 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMVQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYEL 1303
BLAST of EY650135 vs. ExPASy Swiss-Prot
Match: SF3B1_MOUSE (Splicing factor 3B subunit 1 OS=Mus musculus GN=Sf3b1 PE=1 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 5.354e-85 Identity = 150/187 (80.21%), Postives = 168/187 (89.84%), Query Frame = 1 Query: 7 VRIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLADEQSNVYSRPEL 567 V IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G +L YCLQGLFHPARKVR+VYWKIYNS+YIG+QDAL+A YP + ++ N Y R +L Sbjct: 1114 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYDL 1300
BLAST of EY650135 vs. ExPASy Swiss-Prot
Match: SF3B1_SCHPO (U2 snRNP component prp10 OS=Schizosaccharomyces pombe GN=prp10 PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 3.486e-68 Identity = 120/187 (64.17%), Postives = 146/187 (78.07%), Query Frame = 1 Query: 7 VRIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLADEQSNVYSRPEL 567 V IAIVAETC PFTV+PALM +YR PE+NVQNGVLKSL+F+FEYIGE +DY+YA+TPLL DALMDRD VHRQTAAS +KH++LG GLG EDA++HLLN +WPNI E SPHVINAV E I+G+R +G ++ Y +QGLFHP+RKVR YW YNS Y+ + DA+V YP + D+Q N Y L Sbjct: 998 VAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNTYWTSYNSAYVQSADAMVPYYPHVDDDQFNNYDMKTL 1184
BLAST of EY650135 vs. ExPASy Swiss-Prot
Match: SF3B1_YEAST (U2 snRNP component HSH155 OS=Saccharomyces cerevisiae GN=HSH155 PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.958e-59 Identity = 103/189 (54.50%), Postives = 136/189 (71.96%), Query Frame = 1 Query: 7 VRIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLADEQSNVYSRPELMM 573 V I IVA+ C P+ VLP +MNEY PE NVQNGVLK++SF+FEYIG M KDYIY +TPLLEDAL DRDLVHRQTA++ + H+AL +G G EDA +HL+N + PNIFETSPH I ++E +E + ALG + +NY GLFHPA+ VR+ +W++YN++Y+ QDA+V YP D +L++ Sbjct: 783 VAIGIVAKVCGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDLVHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPVTPDNNEEYIEELDLVL 971 The following BLAST results are available for this feature:
BLAST of EY650135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650135 ID=EY650135; Name=EY650135; organism=Citrus sinensis; type=EST; length=840bpback to top |