EY650127

Overview
NameEY650127
Unique NameEY650127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12395 contig Csv1_Contig12395:20..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.887e-28
Identity = 72/122 (59.02%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  501 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGSLYLLG 860
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLS+ +      K++ K  G        P ILK     S       YTRGS    G
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPG 124          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.422e-27
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  501 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSPSRVCSI--CEYTRGSLYLLG 860
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+K Q+DEIL+PAECTIV SLSN++LDSYVLS+ +      K++ K  G        P ILK L+ S   S+   +YTRGS    G
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILK-LAESLSLSVRNVKYTRGSFIFPG 122          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.857e-27
Identity = 71/121 (58.68%), Postives = 81/121 (66.94%), Query Frame = 3
Query:  504 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGSLYLLG 860
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLS+ +      K++ K  G        P ILK     S       YTRGS    G
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPG 124          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.682e-26
Identity = 68/123 (55.28%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  498 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGSLYLLG 860
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK QLDEIL PAECTIV +LSN+++DSYVLS+ +      K++ K  G        P IL+     S       YTRGS    G
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPG 124          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.574e-26
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 3
Query:  501 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGS 845
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLS+ +      K++ K  G        P IL+     S      +YTRGS
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGS 117          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.974e-26
Identity = 67/123 (54.47%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  498 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGSLYLLG 860
            +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLSK QLDEIL PAECTIV +LSN+++DSYVLS+ +      K++ K  G        P IL+     S       YTRGS    G
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPG 124          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.802e-26
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 3
Query:  501 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGSLYLLG 860
            M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+K QLDEIL PAECTIV +LSN+++DSYVLS+ +      K++ K  G        P IL+     S       YTRGS    G
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPG 122          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSPSRVCSI--CEYTRGSLYLLG 860
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLS+ +      KL+ K  G        P ILK L+ S   ++    YTRGS    G
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILK-LADSISLNVRSVRYTRGSFIFPG 120          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 66/117 (56.41%), Postives = 79/117 (67.52%), Query Frame = 3
Query:  501 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP-SRVCSICEYTRGS 845
            MAL  SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLS+ +      K++ K  G        P IL+     S      +YTRGS
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGS 117          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.270e-25
Identity = 68/122 (55.74%), Postives = 79/122 (64.75%), Query Frame = 3
Query:  501 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*L-SPSRVCSICEYTRGSLYLLG 860
            M+  VSAIGFEG+EKRLE+SFFEP  FADP G+GLR LSK+QLDE L PAECTIV+SLSNEH+DSYVLS+ +      K++ K  G        P ILK   S S       YTRG     G
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPG 122          
The following BLAST results are available for this feature:
BLAST of EY650127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DCAM_NICSY4.887e-2859.02S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_CATRO1.422e-2756.91S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_TOBAC1.857e-2758.68S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU2.682e-2655.28S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPONI4.574e-2657.26S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DATST5.974e-2654.47S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI7.802e-2654.92S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_PEA1.738e-2556.20S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM_IPOBA1.738e-2556.41S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DAUCA2.270e-2555.74S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-E09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650127 ID=EY650127; Name=EY650127; organism=Citrus sinensis; type=EST; length=873bp
CGGAAGGAGATCGAAATTCGTTTTGTGAGGCAGAGTGAAAAATCAACCCT
TCTTTAATCCTCAAGGAATTTTATTATTTTCTTGGTCTCTGAATCGAGGG
TTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCTGAGCAAG
GCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGCAGTA
GTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGACGTTCGA
CCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCATACTCAAACTGCGT
CCGCAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCCCAAAAAA
AAGCTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCCGTCTTAA
TACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGTTCTCTCG
TTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTAAGGCAAG
ATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAAAGAGGCT
TGAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGAGGTAGGG
GCCTCCGCTCTCTGTCAAAACATCAATTGGATGAAATACTGAAACCTGCG
GAATGCACAATTGTTTCTTCGTTGTCAAATGAACATCTTGATTCATATGT
CCTCTCAGATCAAGCCTCTGTGTGTACCCTTACAAAGTTATTATCAAAAC
TTGTGGGACTACCAAGCTGCTTCTTTCATCCCTGCATCCTCAAGTAGCTG
AGTCCCTCTCGTGTCTGTTCGATCTGTGAATACACTCGTGGAAGCTTATA
TTTGCTGGGGCTCACCATTTNCC
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