EY650121

Overview
NameEY650121
Unique NameEY650121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650121 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.530e-21
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 2 
Query:   44 NENEWRVFADACPHILAPLSEGRIDQWGRL*CVYHGWCFTGSGDC*FIRQAPPHGPPVHTFE--KACA*FYPSTLQHDIGWIW 286
            N+ +W  F D CPH LAPLSEGR+D+ G L C YHGW F G G C  I QA   GP     +  +ACA  +P+ +   + ++W
Sbjct:  119 NDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVW 201

HSP 2 Score: 43.1282 bits (100), Expect = 2.530e-21
Identity = 24/88 (27.27%), Postives = 44/88 (50.00%), Query Frame = 3 
Query:  312 DLIKTNKPTHIPELYD-PSFTKLLGNIYIPYGYEVLLENLMDPAHVPYAHYGLMRTRKPKLNLDTERGRPIEMSVNKVHINGFIGKQE 572
            D   + +P  +P+ +D P F+ +     + YGY+ L+EN+ DP+H+ +AH+ +   R        +R +P+   V      GF G  +
Sbjct:  208 DRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRR--------DRAKPLPFKVESSGPWGFQGAND 287
The following BLAST results are available for this feature:
BLAST of EY650121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAO_ARATH2.530e-2144.58Pheophorbide a oxygenase, chloroplastic OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-D12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650121 ID=EY650121; Name=EY650121; organism=Citrus sinensis; type=EST; length=893bp
CAAAGAAGTGTTGGGGCTTGATGTCGTGGGGGGGGGGGACATGAATGAGA
ATGAATGGAGAGTCTTTGCTGATGCTTGTCCTCACATATTGGCTCCTTTG
TCAGAAGGAAGAATTGATCAATGGGGAAGGCTTTAGTGTGTGTATCATGG
CTGGTGCTTCACTGGCTCGGGTGACTGTTAATTTATACGTCAGGCTCCCC
CACACGGCCCCCCGGTCCACACATTCGAGAAAGCATGTGCATGATTTTAT
CCAAGTACCCTCCAGCATGACATCGGATGGATTTGGCGCAAATATTGCTC
CTCGGTTCAAGGATCTTATCAAGACTAACAAACCTACTCACATCCCGGAA
CTATATGACCCGTCATTCACAAAATTGCTTGGGAACATATATATACCTTA
TGGCTATGAAGTCCTATTGGAAAATCTTATGGACCCTGCTCATGTTCCAT
ATGCACATTACGGATTGATGCGTACAAGGAAACCCAAACTGAATCTCGAT
ACAGAAAGGGGAAGACCAATTGAAATGAGTGTCAATAAAGTACACATTAA
TGGTTTCATTGGAAAGCAGGAGTGGGCGAAGTAACATATTTTCGGCACCT
TGTATCTTTTTTGCTTATACTGATCTTATGAATGATCAAGATAATGGATC
TGCATCATCATCACGAGCCTGGAAAAAGCTGTAGCAACATAAGCAGCTCT
GATTTTTATTTGTGTTCCATATANTCCTGGGCACAACGGATGATATNGGG
CGCTACCAACATACTGCTCAACTTGATGGACAAAGTTGTTCCGCCGTGGA
TATTTCATATTGCACAGATCTACGTCTGGTTCAGATCTTACCTGCTCACG
TCTGAGAGCAATCATATGGATGTTGGCCCTGCTATAGCCAATG
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