EY650108

Overview
NameEY650108
Unique NameEY650108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650108_ssr774 microsatellite EY650108_ssr774:774..783. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig131 contig Csv1_Contig131:965..1823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.383e-24
Identity = 53/180 (29.44%), Postives = 93/180 (51.67%), Query Frame = 1
Query:   37 DGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVFEGGNSLEDLSNTVSDACICLQENNIPYNVLI 576
            D  +FNF K+  +E+LF+ +   + +                 V INVSP+E+GH LL+P   +C PQ +   +    +     + +P FR+G+NSLG FA++NHLH   YY+     IE +P K ++     + + EL+++P   L +  G +L+ +   +      L ++NI +N+ +
Sbjct:   92 DPKQFNFNKINPKELLFELKRESERKCS---------------VIINVSPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVL---PNLNLYELVDFPSGFLFYTQGPNLDLVVKAICSLTDVLVDHNIAHNLFL 253          

HSP 2 Score: 33.113 bits (74), Expect = 7.383e-24
Identity = 14/44 (31.82%), Postives = 27/44 (61.36%), Query Frame = 2
Query:  662 DTQVNPAVWEISGHMVLKRKKDYEEASEEYAWRLLAEXSLSEGE 793
            ++  N A+ E++GH+  K ++DYE A+EE    ++ +  L + E
Sbjct:  288 ESAFNVALCELAGHLPFKNRQDYESATEETVQDIIQKYLLPQEE 331          
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.488e-21
Identity = 66/183 (36.07%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   37 DGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 576
            D  +FNF K+   EVLF+ +    G     P+ P   +    +V INVSP+E+GHVLL+P   + LPQR+      + L     + +P FR+G+NSLG  A++NHLH   YY+A P P+E AP+  +   G    I  L   P  G +F     G  LE L + V  A   L +  I +N+ +
Sbjct:  120 DPEQFNFNKIRPGEVLFRMQREPKG-----PATP--KQEDDVLVVINVSPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTPLDPKGC---IHLLQALPAPGFLFYTSGPGPDLEVLISRVCRATDYLSDREIAHNLFV 292          
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.538e-21
Identity = 64/191 (33.51%), Postives = 98/191 (51.31%), Query Frame = 1
Query:   13 VDKVLRAGDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 576
            +  V +A D  +FNF K+   EVLF+            P  P  +     +V INVSP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L + P  G +F     G  LE L + V  A   L ++ I +N+ +
Sbjct:  112 IKSVRQAFDPVQFNFNKIRPGEVLFRLHRE--------PDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQDLPAPGFLFYTRGPGTDLESLISRVCRATDYLTDHEIAHNLFV 291          
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.148e-20
Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 1
Query:   13 VDKVLRAGDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 576
            +  V +A D  +FNF K+   EVL++            P  P  +     +V INVSP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L   P  G +F     G  LE L   V  A   L ++ I +N+ +
Sbjct:  112 IKSVRQAFDPEQFNFNKIQPGEVLYRLHRE--------PDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQGLPAPGFLFYTRGPGLDLESLICRVCRATDYLTDHEIAHNLFV 291          
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.806e-20
Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 1
Query:   13 VDKVLRAGDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 576
            +  V +  D  +FNF ++   EVLF+    +D            V+    +V INVSP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E AP++ +   G   ++  L   P  G +F     G  LE L + V  A   L +  I +N+ +
Sbjct:  112 IKSVRQEFDPEQFNFNQIRPGEVLFRLHRKQD--------CSGTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEPLDPRG---RLHVLQALPAPGFLFYTSRPGPDLEALISRVCRATDYLTDCEIAHNLFV 291          
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 67/238 (28.15%), Postives = 110/238 (46.22%), Query Frame = 1
Query:   43 NKFNFTKVGQEEVLFQFEASE-DGEVQFH----------------------PSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLIA-----DCGK----RIFLLPQCYAEKQALGESEFRA 657
            N+FN+ K+  EE++FQ   SE +  V  H                       S  ++ ++S ++V INVSP+E+GHVL +P    CLPQ +  +  L  +     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P  G +F   G  L+  +  +      L   NI +N+ +      D GK    R  +    +A K + G  E  A
Sbjct:  109 NQFNYNKIKSEEIVFQMIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVINVSPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFYLDHELLIESSCSKPLCPE---INFHLVTHFPAPGFLFYTDGKDLKSTAQKICKVTDFLVAKNIAHNLFVTRGSNPDTGKVSEDRNGIRVIIWARKPSFGAKEVSA 343          
BLAST of EY650108 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18
Identity = 58/202 (28.71%), Postives = 96/202 (47.52%), Query Frame = 1
Query:   43 NKFNFTKVGQEEVLFQFEASEDGEV----QFHPSAP-------------------IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLI 576
            N+FN+ K+  EE++FQ   SE        + H S+                    ++ +   ++V INVSP+E+GHVL +P    CLPQ +  D  L  L     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P    +F   G +L+  +  +      L   NI +N+ I
Sbjct:  110 NQFNYNKIKPEEIVFQMIRSETEHCVDSDKVHGSSVNGMGTSDCKSGSTHQRCCILECKGGCTLVVINVSPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSSKPLCPE---MNFHLITHFPAPSFLFYTDGRNLKSTAQNICKVTDFLVAKNIAHNLFI 308          
The following BLAST results are available for this feature:
BLAST of EY650108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CO058_DANRE7.383e-2429.44UPF0580 protein C15orf58 homolog OS=Danio rerio GN... [more]
CO058_MOUSE1.488e-2136.07UPF0580 protein C15orf58 homolog OS=Mus musculus P... [more]
CO058_HUMAN2.538e-2133.51UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf... [more]
CO058_MACFA2.148e-2032.98UPF0580 protein C15orf58 homolog OS=Macaca fascicu... [more]
CO058_BOVIN2.806e-2032.46UPF0580 protein C15orf58 homolog OS=Bos taurus PE=... [more]
CO058_XENTR6.911e-1928.15UPF0580 protein C15orf58 homolog OS=Xenopus tropic... [more]
CO058_XENLA5.850e-1828.71UPF0580 protein C15orf58 homolog OS=Xenopus laevis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650108 ID=EY650108; Name=EY650108; organism=Citrus sinensis; type=EST; length=859bp
ACTGAGTTCCGTGTTGATAAGGTCCTGCGGGCGGGGGATGGGAACAAGTT
CAACTTTACCAAAGTGGGGCAAGAAGAGGTGCTCTTCCAGTTTGAGGCAA
GCGAAGATGGTGAAGTCCAGTTTCACCCAAGTGCCCCCATTGATGTTGAG
AATTCTCCAAGTGTTGTTGCCATCAATGTGAGTCCTATTGAGTACGGGCA
TGTGCTGTTGATCCCACGAGTTCTTGAGTGCTTGCCACAGAGGATTGACC
GTGATAGCTTCTTGCTCGCACTTTACATGGCTGCAGAAGCTGGGAATCCA
TACTTCAGGTTGGGTTACAACAGCTTGGGTGCATTTGCTACCATCAACCA
CCTTCACTTCCAGGCTTACTACATGGCCTTGCCTTTTCCAATTGAGAAGG
CTCCTACCAAGAAGATAATCTCTACTGGCAGTGGTGTGAAGATCTCTGAG
CTTTTAAACTATCCAGTCAGAGGCCTCGTCTTTGAAGGTGGAAACTCTCT
GGAAGACTTATCCAACACAGTCTCGGATGCGTGCATTTGCCTTCAAGAGA
ACAACATTCCTTACAATGTTCTCATTGCTGATTGTGGAAAGCGCATATTT
CTCTTACCACAGTGCTATGCTGAGAAACAAGCTCTGGGGGAAAGTGAGTT
CAGAGCTTCTGGACACCCAAGTGAACCCTGCTGTGTGGGAGATTAGTGGG
CATATGGTGTTAAAGAGGAAGAAGGACTATGAAGAGGCGTCCGAGGAATA
TGCTTGGAGGCTGCTNGCCGAANTCTCTCTCTCTGAGGGAGAGTACCAAG
AAAGTAATGCTCTCATCTTTGAGCCATTGCGCGTGGTGATGATCCAATGG
GAGGGTGTG
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