EY650088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.087e-61 Identity = 119/171 (69.59%), Postives = 134/171 (78.36%), Query Frame = 1 Query: 22 MSSEKKRGGGSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGSGDKKD-------------DKSTEDDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 MS+ +K SSDGE FE++E VALESQTIKHM+EDDC D IPLPNVTS ILSK IEYC +HVEA + S+++DLKTWD++F+K DQ TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDF+P+EEEE RRENQWAFE Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.137e-59 Identity = 117/159 (73.58%), Postives = 131/159 (82.39%), Query Frame = 1 Query: 28 SEKKRGGGSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGSGDKKDDK---STEDDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 S KK SSDGE+FEVEE VALESQTI HMVEDDC D +PLPNVTS IL+K IEYC +HVEA + + + +++DDLK WDADF+K DQ TLF+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDF+P+EEEE RRENQWAFE Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54 Identity = 105/152 (69.08%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGS---GDKKDDKSTE-DDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 SSDGE+FE+EE VA++SQTIKHM+EDDCAD IPLPNVT IL+K IEYC KHVEA + GDK S E D+LK WD++FVK DQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND++P+EE E R EN+WAFE Sbjct: 12 SSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.659e-53 Identity = 104/152 (68.42%), Postives = 122/152 (80.26%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGS---GDKKDDKSTED-DLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 SSDGE+FEVEE VA+ESQTIKHM+EDDC D IPLPNVT IL+K IEYC KHVEA + GDK STE+ +LKTWD DFVK D TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND++P+EE E R EN+WAFE Sbjct: 12 SSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49 Identity = 98/148 (66.22%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGSGDKKDDKSTEDDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL K IEYC KH + + +E+DL WD F+ +Q+T+F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE R+ENQWAFE Sbjct: 10 SSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHV-----DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.781e-48 Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGK-HVEAGSGDKKDDKSTEDDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL K IEYC K HV+ + +E+DL WD F+ +Q+T+F+LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE R+ENQWAFE Sbjct: 10 SSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDEAN------PISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.216e-46 Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGSGDKKDDKSTEDDLKTWDADFVKG--DQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 SSDGE+F+VEE VA++SQTI HM+EDDC +P+ NVT ILSK IEYC KHV + S ++ ++D+LK WDA+F+K +TLFD++LAANYLNIK LLDL CQTVADMI GK P+EIR I+NDF+P+EEEE R+ENQWAFE Sbjct: 9 SSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEE----SKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.147e-43 Identity = 91/149 (61.07%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKGIEYCGKHVEAGSGDKKDDKSTEDDLKTWDADFVKG-DQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQWAFE 495 SSDGE+FEVEE VA + + ++HM+EDDC T +PL NVT ILS +EYC KHV D++S D+ KTWD +F+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDF+P+EE R+EN WAFE Sbjct: 10 SSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVV-------DEES--DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.804e-43 Identity = 90/148 (60.81%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKGIEYCGKHVEAGS--GDKKDDKSTEDDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQW 486 SSD + FE+E+ +A S TIK+M+ED +D+ IPLPNVTSTIL K ++YC H + S GD K D+ DD+ +D DF K DQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE+ R+EN+W Sbjct: 8 SSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of EY650088 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43 Identity = 90/148 (60.81%), Postives = 114/148 (77.03%), Query Frame = 1 Query: 52 SSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKGIEYCGKHVEAGS--GDKKDDKSTEDDLKTWDADFVKGDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEGRRENQW 486 SSD + FE+E+ +A S TIK+M+ED +D IPLPNVTSTIL K ++YC H + S GD K D+ DD+ +D DF K DQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE+ R+EN+W Sbjct: 8 SSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155 The following BLAST results are available for this feature:
BLAST of EY650088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650088 ID=EY650088; Name=EY650088; organism=Citrus sinensis; type=EST; length=692bpback to top |