EY650082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650082 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.314e-19 Identity = 58/108 (53.70%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 77 MATEDPVVDTETLPQPESAEPV------VEDKPSSKAGKGKTSKEXXXXXXXXXXXXXXXXXXXXYEEMIKDAIVTLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLL 382 MATE+P+V ET+P+P EP V +K KA KT K+ YEEMIKDAIV+LKEK GSSQYAIAKFIEEK KQLP NFKKLLL Sbjct: 1 MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKT-KKAKGSKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLL 107
BLAST of EY650082 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.091e-17 Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 77 MATEDPVVDTETLPQPESAEPVVEDKPSSKAGKGKTSKEXXXXXXXXXXXXXXXXXXXXYEEMIKDAIVTLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLL 382 MATE+PV+ E + + ++A V+D+ + A GK KE Y EMIKDAIVTLKE+TGSSQ+AI KFIEEK K LP NFKKLLL Sbjct: 1 MATEEPVIVNEVVEE-QAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLL 101
BLAST of EY650082 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 47/96 (48.96%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 98 VDTETLPQPESAEPVVEDKPSSKAGKGKTSKEXXXXXXXXXXXXXXXXXXXX-YEEMIKDAIVTLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLL 382 ++ T + VE KP++K K K KE YEEMIKDAIVTLKE+TGSSQYAI KFIEEK K+LPP F+KLLL Sbjct: 12 IEGNTAADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLL 107
BLAST of EY650082 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14 Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 146 EDKPSSKAGKGK---TSKEXXXXXXXXXXXXXXXXXXXX-YEEMIKDAIVTLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLL 382 E KP++K GK K T+K YEEMIKDAIVTLKE+TGSSQYAI KFIEEKHK LPP F+KLLL Sbjct: 25 EKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLL 107
BLAST of EY650082 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12 Identity = 40/80 (50.00%), Postives = 47/80 (58.75%), Query Frame = 2 Query: 146 EDKPSSKAGKGKTSKEXXXXXXXXXXXXXXXXXXXXYEEMIKDAIVTLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLF 385 + K +KA K KE + EMI DAI TLKE+TGSSQYAI KF+E+KHKQLP NF+KLLLF Sbjct: 18 KSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLF 97 The following BLAST results are available for this feature:
BLAST of EY650082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650082 ID=EY650082; Name=EY650082; organism=Citrus sinensis; type=EST; length=892bpback to top |