EY650067

Overview
NameEY650067
Unique NameEY650067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: VPS45_ARATH (Vacuolar protein sorting-associated protein 45 homolog OS=Arabidopsis thaliana GN=VPS45 PE=1 SV=2)

HSP 1 Score: 324.324 bits (830), Expect = 5.968e-88
Identity = 171/235 (72.77%), Postives = 190/235 (80.85%), Query Frame = 1
Query:  208 MVLVTAARDYINRMLQDISGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQETTKLMYSXKVVFLIXKYRISHCS----YTGRRDDPVT 900
            MVLVT+ RDYINRMLQDISGMKVLILDS+TVS VS+VYSQSELLQKEVFLVE++DSI  SKESMSHLKAVYF+RP+S+NIQ LR QLANPRFGEYHLFFSN+LKDTQIHILADSD          +YADFV+ +PYHFTLN+ SNHLYM+PAVVDPS LQ F DRVVDGIA  FLALKR+PVIRYQRTS  AKRIA ET KLMY  +    +  +R +  S       RRDDPVT
Sbjct:    1 MVLVTSVRDYINRMLQDISGMKVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISVSKESMSHLKAVYFIRPTSDNIQKLRYQLANPRFGEYHLFFSNLLKDTQIHILADSDEQEVVQQVQEYYADFVSGDPYHFTLNMASNHLYMIPAVVDPSGLQRFSDRVVDGIAAVFLALKRRPVIRYQRTSDTAKRIAHETAKLMYQHESA--LFDFRRTESSPLLLVIDRRDDPVT 233          
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: VPS45_DICDI (Vacuolar protein sorting-associated protein 45 OS=Dictyostelium discoideum GN=vps45 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.219e-40
Identity = 91/232 (39.22%), Postives = 137/232 (59.05%), Query Frame = 1
Query:  205 KMVLVTAARDYINRMLQDISGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQETTKLMYSXKVVFLIXKYRISHCSYTGRRDDPVT 900
            +M ++ + ++YIN++L +I GMKVL+LD +T   VS+VY+QSE+LQKEVFL E +++   +KE M H+K VYF+RP+ ENIQ +  +L +P+F +YHLFF+N +    +  +A +D          ++ DF AV P  FTLN+P       P        Q    RVVDG+    LALK+KPVIRY   S   + +A++ T+ M   + +F   +          R+DDP+T
Sbjct:    5 QMDVIASIQEYINKILTNIQGMKVLVLDKETAGIVSMVYTQSEILQKEVFLFEKIEN---TKEKMLHMKGVYFIRPTQENIQSICDELKDPKFNKYHLFFTNTISKVSLDEIAKADEQDVVSEIQEYFGDFFAVNPDTFTLNLPGMLTKKSP------RWQGDVGRVVDGLFSSLLALKKKPVIRYSSNSDTTRYLAEKITERMNRDRDLFDFRRQGEPLLLILDRKDDPIT 227          
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: VPS45_MOUSE (Vacuolar protein sorting-associated protein 45 OS=Mus musculus GN=Vps45 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.909e-34
Identity = 79/198 (39.90%), Postives = 125/198 (63.13%), Query Frame = 1
Query:  208 MVLVTAARDYINRMLQDIS-GMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQ 798
            M +V A + YI++M++D   GMKVL++D +T   VS+VY+QSE+LQKEV+L E +DS  +++E M HLKA+ FLRP+ EN+++L ++L  P++  Y ++FSN++  + +  LA++D          FY D++AV P+ F+LNI            DP+ L     R   G+    L+LK+ P+IRYQ +S  AKR+ +
Sbjct:    1 MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDS--QNREIMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILG---CCQGRNWDPAQL----SRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLGE 189          
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: VPS45_HUMAN (Vacuolar protein sorting-associated protein 45 OS=Homo sapiens GN=VPS45 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.962e-34
Identity = 79/198 (39.90%), Postives = 125/198 (63.13%), Query Frame = 1
Query:  208 MVLVTAARDYINRMLQDIS-GMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQ 798
            M +V A + YI++M++D   GMKVL++D +T   VS+VY+QSE+LQKEV+L E +DS  +++E M HLKA+ FLRP+ EN+ ++ ++L  P++  Y ++FSN++  + +  LA++D          FY D++AV P+ F+LNI            DP+ L     R   G+    L+LK+ P+IRYQ +S  AKR+A+
Sbjct:    1 MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDS--QNREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILG---CCQGRNWDPAQL----SRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLAE 189          
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: VPS45_RAT (Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus GN=Vps45 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.105e-33
Identity = 79/198 (39.90%), Postives = 123/198 (62.12%), Query Frame = 1
Query:  208 MVLVTAARDYINRMLQDIS-GMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQ 798
            M +V A + YI++M++D   GMKVL++D +T   VS+VY+QSE+LQKEV+L E +DS  +++E M HLKA+ FLRP+ EN+  L ++L  P++  Y ++FSN++  + +  LA++D          FY D++AV P+ F+LNI            DP+ L     R   G+    L+LK+ P+IRYQ +S  AKR+ +
Sbjct:    1 MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDS--QNREIMKHLKAICFLRPTKENVDSLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILG---CCQGRNWDPAQL----SRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLGE 189          
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: YAB3_SCHPO (Putative vacuolar protein sorting-associated protein C2G11.03c OS=Schizosaccharomyces pombe GN=SPAC2G11.03c PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.890e-25
Identity = 72/233 (30.90%), Postives = 125/233 (53.65%), Query Frame = 1
Query:  208 MVLVTAARDYINRMLQDISGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFC-DRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQETTKLMYSXKVVFLIXKYRISH-CSYTGRRDDPVT 900
            M LV+A++ Y  R+ Q++S +K+L+L+  T   VS   +QS LL+++++L  L+ +    +E + HLK V FLRP+   ++ L  +L +P++ EYHL+F+N++  + +  LA+SD          F+ D++ V     + NIP  H+        P + Q     R   GI    L+LK+KPVIRY   S +  ++A+E +  +     +F   K   +       R++DP+T
Sbjct:    1 MDLVSASQSYFKRIFQEVSDLKILLLEEDTTKIVSSCITQSNLLEQQIYLTVLLGN---KREKLRHLKCVAFLRPTPTTLRLLCEELRDPKYAEYHLYFTNVIPKSFLERLAESDDFEAVKSIQEFFLDYLVVNNDLASFNIP--HI----IEDSPDNWQDGAFHRTHQGIISLLLSLKKKPVIRYDNNSLLCLKLAEEVSYTIQHESQLFNFRKPDTAPILLLLDRKNDPIT 224          
BLAST of EY650067 vs. ExPASy Swiss-Prot
Match: VPS45_YEAST (Vacuolar protein sorting-associated protein 45 OS=Saccharomyces cerevisiae GN=VPS45 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.037e-23
Identity = 66/211 (31.28%), Postives = 111/211 (52.61%), Query Frame = 1
Query:  208 MVLVTAARDYINRMLQDISGM-----------KVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDXXXXXXXXXXFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAXXFLALKRKPVIRYQRTSXIAKRIAQETT 807
            M L   A  YIN+++   S +           KVL+LD  T   +S+  +QSELL+ E++LVE +++  + +E   HL+ + +++P+ E +QHL R+L NPR+GEY +FFSN++  +Q+  LA+SD           + DF  +    F+ ++          V     L     +  + +    L+LK KP IRY+  S I +R+A+E +
Sbjct:    1 MNLFDVADFYINKIVTSQSKLSVANVNEHQRIKVLLLDKNTTPTISLCATQSELLKHEIYLVERIEN--EQREVSRHLRCLVYVKPTEETLQHLLRELRNPRYGEYQIFFSNIVSKSQLERLAESDDLEAVTKVEEIFQDFFILNQDLFSFDLQPREFLSNKLVWSEGGL----TKCTNSLVSVLLSLKIKPDIRYEGASKICERLAKEVS 205          
The following BLAST results are available for this feature:
BLAST of EY650067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
VPS45_ARATH5.968e-8872.77Vacuolar protein sorting-associated protein 45 hom... [more]
VPS45_DICDI1.219e-4039.22Vacuolar protein sorting-associated protein 45 OS=... [more]
VPS45_MOUSE2.909e-3439.90Vacuolar protein sorting-associated protein 45 OS=... [more]
VPS45_HUMAN4.962e-3439.90Vacuolar protein sorting-associated protein 45 OS=... [more]
VPS45_RAT1.105e-3339.90Vacuolar protein sorting-associated protein 45 OS=... [more]
YAB3_SCHPO1.890e-2530.90Putative vacuolar protein sorting-associated prote... [more]
VPS45_YEAST1.037e-2331.28Vacuolar protein sorting-associated protein 45 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-G11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650067 ID=EY650067; Name=EY650067; organism=Citrus sinensis; type=EST; length=922bp
ATTTTGGAAAAACGCTGAGTTTTAACTTCGAGTCTTTCATTTCAGATTCC
TAATTCCCTCTTCATAGATCTGCACTTCCTCCAACCTGAACAAGATCGTT
AGAAACTTCGCGGCAATTGCATTTTCAGGCTTGATTCCCAACTCTCGTTC
ATCCTCATCATCATATCAATCTTCCAAATCGTAGCCCTATCTGGAGGGCT
CACGAAAATGGTCCTGGTAACGGCCGCACGTGATTACATCAACCGGATGT
TGCAGGACATCTCCGGCATGAAGGTTCTCATTCTCGATTCTCAAACGGTT
AGTGCTGTAAGTGTGGTGTATTCACAGTCTGAGTTACTTCAGAAAGAAGT
GTTTTTGGTAGAGTTGGTGGATTCCATTTACAAGTCCAAAGAATCCATGT
CTCATCTTAAAGCAGTTTATTTTCTTCGTCCATCGTCCGAGAATATTCAG
CATTTGCGGCGCCAGCTGGCCAATCCTAGGTTCGGAGAGTATCACCTATT
TTTCTCCAACATGTTGAAGGACACACAGATTCATATTTTAGCTGATTCAG
ATGAGCAGGAAGTTGTGCAGCAAGTTCAGGAGTTTTATGCCGATTTTGTC
GCAGTTGAGCCTTATCATTTTACTCTGAATATACCCTCAAATCATCTTTA
TATGCTCCCAGCAGTTGTAGACCCTTCAAGTTTGCAGCACTTCTGTGACC
GGGTTGTTGATGGTATTGCANCANTTTTTCTGGCATTGAAACGTAAACCA
GTTATTAGGTACCAGAGGACCTCANATATTGCTAAAAGGATAGCACAGGA
AACAACTAAGCTGATGTACAGCAGNAAAGTGGTCTTTTTGATTTANAAGT
ACAGAATCTCTCACTGCTCTTATACTGGAAGAAGGGATGATCCTGTGACT
NCGTGCTGAATANTGGACCTAT
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