EY650048

Overview
NameEY650048
Unique NameEY650048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650048 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.646e-45
Identity = 91/161 (56.52%), Postives = 98/161 (60.87%), Query Frame = 3
Query:  135 AEDWRIDDIKGLLGRCNFKADMLDR*VSLLSGGEKARLAFCKFMVKPXTLLVLDEPNYHLDIPSKEMLGXA---YXSTWAQ*SXVLMDDTSKANK**R*EG*RHNLQDYGWDYNFYLGKT*CPEKGLDLR--------DNLKKGSKKRANSKL-KAGKEPR 581
            AEDWR DDIKGLLGRCNFKADMLDR VSLLSGGEKARLAFCKFMV P TLLVLDEP  HLDIPSKEML  A   Y  T    S          N+    E     L+DY  DYN+YL      EK LD R        +  +K  K +A SK+ KA KE R
Sbjct:  515 AEDWRSDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVED--GCLEDYAGDYNYYL------EKNLDARTKELEREAELEEKAPKVKAKSKMSKAEKEAR 667          

HSP 2 Score: 67.781 bits (164), Expect = 3.646e-45
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1
Query:   16 PRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV 123
            P  GEV+LGEHNVLPNYFEQNQAE LDLDKTVLETV
Sbjct:  476 PVKGEVILGEHNVLPNYFEQNQAEVLDLDKTVLETV 511          
BLAST of EY650048 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 2.522e-43
Identity = 87/161 (54.04%), Postives = 100/161 (62.11%), Query Frame = 3
Query:  117 DSSMKLAEDWRIDDIKGLLGRCNFKADMLDR*VSLLSGGEKARLAFCKFMVKPXTLLVLDEPNYHLDIPSKEMLGXA---YXSTWAQ*SXVLMDDTSKANK**R*EG*RHNLQDYGWDYNFYLGK-T*CPEKGLDLRDNL-KKGSKKRANSKL-KAGKEPR 581
            ++ ++ A DWRIDDIK LLGRCNFKADMLDR VSLLSGGEKARLAFCKFMVKP TLLVLDEP  HLDIPSKEML  A   Y  T    S          N+    E     L DY  DYN++L K      + L+    L +K  K +A SK+ KA +E R
Sbjct:  495 ETVVEAAVDWRIDDIKALLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNR--VIEVRDGGLMDYAGDYNYFLEKNVEARARELEREAELEEKAPKVKAKSKMSKAEREAR 653          

HSP 2 Score: 67.0106 bits (162), Expect = 2.522e-43
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1
Query:   16 PRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV 123
            P  GEV+LGEHNVLPNYFEQNQAEA DLDKTV+ETV
Sbjct:  462 PMRGEVILGEHNVLPNYFEQNQAEAQDLDKTVIETV 497          
The following BLAST results are available for this feature:
BLAST of EY650048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AB5F_ARATH3.646e-4556.52ABC transporter F family member 5 OS=Arabidopsis t... [more]
AB2F_ARATH2.522e-4354.04ABC transporter F family member 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650048 ID=EY650048; Name=EY650048; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGGNAACCAAGAGGAGGTGAAGTTCTGCTTGGTGAGCATAA
TGTCCTACCAAACTATTTTGAGCAGAATCAGGCTGAGGCACTTGATTTGG
ACAAAACAGTACTTGAGACAGTAGCATGAAGCTTGCAGAGGACTGGAGAA
TTGATGATATAAAGGGCCTCCTTGGTCGTTGTAATTTCAAAGCTGACATG
CTTGATAGATAGGTTTCCCTTTTGAGTGGTGGTGAGAAGGCACGTCTTGC
ATTTTGCAAATTCATGGTAAAACCATNCACTCTTCTAGTTTTGGATGAAC
CCAACTATCACTTGGATATTCCTTCAAAAGAGATGCTCGGAGANGCATAT
CANAGTACATGGGCACAGTGATCACANGTNCTCATGGACGATACTTCGAA
AGCAAATAAGTAATAAAGGTAGGAAGGGTAAAGGCACAATTTACAGGACT
ATGGCTGGGATTACAATTTTTACCTAGGAAAAACCTAATGCCCGGAAAAG
GGGCTTGACCTGAGGGACAATCTAAAAAAGGGGTCCAAAAAAAGGGCCAA
TTCAAAATTAAAGGCGGGAAAAGAGCCCCGAAAAAACAAAAATGGGGGCT
TTTCGGGCGGGAAAAAAAATAAAGGGTTCNAAATGCCAAAGAGGGGAGTG
GGATTAACCCCCTTTTTTTGGGGGAAAAACCCGGGGGCAATATTGGTGGG
GAAATTTCCGGGAAAAAGTGGGGGGGGGGGGTGCCCACACAGGGGGGGGC
GGTTTTCCCCACCTTGGTTTAAGGGGGGCAAGGAAAAATATTTTGGCAAA
AAATGAGTGTTTTTTTTCCCCCGAATTTTCCCCCAAAAAAGAAAAAGAGT
TT
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