EY650047

Overview
NameEY650047
Unique NameEY650047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650047 vs. ExPASy Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.618e-25
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 2
Query:  140 GTFSNYATPSSYDY----VDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLDDSVPCMVRAKRGCATHPRSIAGRVPMTPISDRIMMLQDLVP 475
            G FSN+  P++YDY    VD+SP    R   D  TQF S          LK EQ   + GG+S ++DM+M+K+ +DSVPC VRAKRGCATHPRSIA RV  T ISDRI  LQ+LVP
Sbjct:  115 GYFSNFGIPANYDYLSTNVDISPTKRSR---DMETQFSS---------QLKEEQ---MSGGISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVP 215          

HSP 2 Score: 27.335 bits (59), Expect = 7.618e-25
Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   97 GFQRQNSSPADLFDG 141
            GF RQNSSPAD   G
Sbjct:   94 GFHRQNSSPADFLSG 108          
BLAST of EY650047 vs. ExPASy Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.061e-23
Identity = 65/117 (55.56%), Postives = 78/117 (66.67%), Query Frame = 2
Query:  140 GTFSNYATPSSYDY----VDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQS-GQVPGGVSNLVDMDMEKLLDDSVPCMVRAKRGCATHPRSIAGRVPMTPISDRIMMLQDLVP 475
            G   ++   ++YDY    +DVSP S KR+RE     F SP     F S +K EQS GQVP GVS++ DM+ME L++DSV   VRAKRGCATHPRSIA RV  T ISDRI  LQ+LVP
Sbjct:  108 GFIQSFGIQANYDYLSGNIDVSPGS-KRSRE-MEALFSSP----EFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVP 218          

HSP 2 Score: 28.1054 bits (61), Expect = 1.061e-23
Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 1
Query:   43 PVSVTAGLSLSHSQLDQVGFQRQNSSPADLFDG 141
            P+ V  GL        Q GF RQNS+PAD   G
Sbjct:   79 PIPVEQGL------YQQGGFHRQNSTPADFLSG 105          
BLAST of EY650047 vs. ExPASy Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 49/116 (42.24%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  146 FSNYATPSSYDYVDVSPNSNKRAREDNNTQF------PSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLDDSVPCMVRAKRGCATHPRSIAGRVPMTPISDRIMMLQDLVP 475
            +S++  PSS+  +D + +S KR  ED+   F       S         HL + +S       S++V +D    L DSVPC +RAKRGCATHPRSIA RV  T IS+R+  LQ+LVP
Sbjct:  204 YSHWNDPSSF--ID-NLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 313          
BLAST of EY650047 vs. ExPASy Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 2
Query:  332 DMEKLLDDSVPCMVRAKRGCATHPRSIAGRVPMTPISDRIMMLQDLVP 475
            D+E+LL DS+PC +RAKRGCATHPRSIA RV  T IS+R+  LQDLVP
Sbjct:  291 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVP 338          
The following BLAST results are available for this feature:
BLAST of EY650047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BH080_ARATH7.618e-2553.45Transcription factor bHLH80 OS=Arabidopsis thalian... [more]
BH081_ARATH1.061e-2355.56Transcription factor bHLH81 OS=Arabidopsis thalian... [more]
BH130_ARATH1.775e-1242.24Transcription factor bHLH130 OS=Arabidopsis thalia... [more]
BH122_ARATH1.775e-1270.83Transcription factor bHLH122 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650047 ID=EY650047; Name=EY650047; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGTGCCTGACTCATCTACTTAGTAGCGGCGATCCTGTTAG
TGTTACTGCTGGGCTGAGCTTGAGTCATAGTCAGCTGGACCAAGTTGGTT
TCCAGCGGCAGAACAGCTCCCCTGCCGATTTATTTGATGGGTACCTTTTC
AAACTATGCAACTCCATCGAGTTACGATTATGTCGATGTTTCTCCTAATT
CCAATAAGAGAGCTAGGGAAGACAACAATACACAATTTCCATCTCCAACT
GCAAAACTGAACTTTCACTCTCACTTGAAAGTGGAGCAAAGTGGACAGGT
ACCTGGTGGTGTTTCAAATTTGGTAGATATGGATATGGAGAAACTGTTGG
ATGATTCAGTGCCTTGTATGGTTCGTGCAAAGCGCGGTTGCGCCACTCAT
CCTCGAAGTATTGCTGGGAGGGTTCCTATGACGCCGATCAGTGACCGTAT
TATGATGCTTCAGGATCTTGTGCCCAAATGGACGAGCAGACCGGCCCGCT
TATATCTTAACAGATGTTGTTCATATGTTTGGGTTTTTGCAGAGAAAGGG
GGGATTTACGGGGCTGAGGGGAGATCATCTGCTCGGAACAGATACTCGGG
GAATTTACCATGTGTTGACTTATATGCAGGGTAAAGGCCCTATGGGGTGG
TTGGCGTGATTCCTTGCTGGACTCGTCCCTCGATGGATTAGTGCGTAGTA
GACGGGGTGACGTGCTGATGAAAGCGGTGGCCGTGTGGGGGGAGATTGTC
GAGCGTGCGGATATGTGTGCGCCCGCCGCCGAGTCGAGCGGGTGGTTGTG
CGGAGGAGGGGGGACTCTGGCGTGTGGATGGCAAGTGCATCCTATGATAC
GCGATTTGCGCATGTCTTATCTCCTGGGTGGGGCGGGGTGGTTGTGGAG
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