EY650016

Overview
NameEY650016
Unique NameEY650016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650016_ssr352 microsatellite EY650016_ssr352:352..363. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.208e-58
Identity = 122/203 (60.10%), Postives = 148/203 (72.91%), Query Frame = 2
Query:  101 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA--RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAKIRA 703
            GLRG+S  QAVLEGS Q++G NRLN    SRV+V   R+G  +RAQQ  + PE+SRR++IGLVAAG+A GSFV+AV A+A PIKV            T NSD+ RD  L LK+RF+IQPLSP           K+I+NVK  IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSLK+LT  LFQ   +LD+AA+ ++
Sbjct:   10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKS 207          

HSP 2 Score: 28.1054 bits (61), Expect = 1.208e-58
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +YY+ETVS+LN+ L K+G
Sbjct:  211 AEKYYSETVSSLNNVLAKLG 230          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.574e-58
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 2
Query:  101 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPL-KERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAKIRA 703
            GLRG+S  QAVLEGS Q+SG NRL+ P+ SRVAV + G  +RAQQ S E ETSRRAM+G VAAG+ASGSFV+AVLA+A PI V            T NSD+ RD  LP  K+RF++QPL P            +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+ LT  LF +  +LDHAAKI++
Sbjct:   10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKS 209          

HSP 2 Score: 25.7942 bits (55), Expect = 1.574e-58
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +YY +TVS +N+ L K+G
Sbjct:  213 AEKYYGQTVSNINEVLAKLG 232          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 2.001e-52
Identity = 119/200 (59.50%), Postives = 141/200 (70.50%), Query Frame = 2
Query:  101 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA-RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXX-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAK 694
            GL G+S   AVLEGS +++G +RLN   + RVAVA RS   VRAQQ+    ETSRR++IGLVAAG+A GSFVQAVLADA  IKV             T NSD+ RD  L LK+RF++QPL P           KDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SLK+LT  LF    +LD+AAK
Sbjct:    6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAK 198          

HSP 2 Score: 29.261 bits (64), Expect = 2.001e-52
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +YYAETVS LN+ L K+G
Sbjct:  205 AEKYYAETVSALNEVLAKLG 224          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.135e-47
Identity = 108/205 (52.68%), Postives = 137/205 (66.83%), Query Frame = 2
Query:  122 SQAVLEGSSQL-SGPNRLNAPSNSRVAVARSGFTVRAQQ---------ASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLK-NLTG*LFQNHRHLDHAAKIRA 703
            +  +LEGS QL SG NR  + S+SR       F VRAQQ         ++ +P+++RRAM+GLVA G+AS SFVQAVLA+A PIKV            TLNSDE RDL LPLKERF+IQPLSP           K+I+ VK+ ID+K      NDLRLRASYLRYDLNT+IS+KPK++KQSLK +  G LFQ+  +LD+AAK+++
Sbjct:    6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKS 208          

HSP 2 Score: 30.4166 bits (67), Expect = 5.135e-47
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +YYA+ VSTLND L K+G
Sbjct:  212 AEKYYADAVSTLNDVLSKIG 231          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.210e-43
Identity = 96/190 (50.53%), Postives = 126/190 (66.32%), Query Frame = 2
Query:  137 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAKIRA 703
            +G    +GP R  A   SR+AV      VRA  A+ + +T RRA++GLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTG LF     LDHAAKI++
Sbjct:   13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKS 194          

HSP 2 Score: 21.557 bits (44), Expect = 3.210e-43
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +YY  T S L D L K+G
Sbjct:  198 AEKYYTLTKSALGDVLAKLG 217          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 3.210e-43
Identity = 96/190 (50.53%), Postives = 126/190 (66.32%), Query Frame = 2
Query:  137 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAKIRA 703
            +G    +GP R  A   SR+AV      VRA  A+ + +T RRA++GLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTG LF     LDHAAKI++
Sbjct:   13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKS 194          

HSP 2 Score: 21.557 bits (44), Expect = 3.210e-43
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +YY  T S L D L K+G
Sbjct:  198 AEKYYTLTKSALGDVLAKLG 217          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.002e-41
Identity = 99/198 (50.00%), Postives = 124/198 (62.63%), Query Frame = 2
Query:  116 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNE-PETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAKIRA 703
            + + A + G SQ   P+R  A S +R AV      VRA    +   +  RRA+IGLVA G+  G+  QA  A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTG LF     LDHAAKI++
Sbjct:    2 AQAMASMTGLSQGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKS 194          

HSP 2 Score: 20.7866 bits (42), Expect = 1.002e-41
Identity = 8/20 (40.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +Y+A T   L D L K+G
Sbjct:  198 AEKYFAATKDALGDVLAKLG 217          
BLAST of EY650016 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.231e-35
Identity = 87/197 (44.16%), Postives = 116/197 (58.88%), Query Frame = 2
Query:  116 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTG*LFQNHRHLDHAAKIRA 703
            + + A + G SQ   P   ++ + + V V R+  +    + +  P   R      + A  +S    QAV A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTG LF     LDHAAK+++
Sbjct:    2 AQAMASMTGLSQGVCPAAADSRTRTAVVVVRA--SAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKS 190          

HSP 2 Score: 20.7866 bits (42), Expect = 1.231e-35
Identity = 8/20 (40.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  711 SREYYAETVSTLNDXLXKVG 770
            + +Y+A T   L D L K+G
Sbjct:  194 AEKYFAATKDALGDVLAKLG 213          
The following BLAST results are available for this feature:
BLAST of EY650016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ2_ARATH1.208e-5860.10Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_SPIOL1.574e-5859.90Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_ARATH2.001e-5259.50Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI5.135e-4752.68Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSJ3.210e-4350.53Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI3.210e-4350.53Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE1.002e-4150.00Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ2_MAIZE1.231e-3544.16Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-C05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650016 ID=EY650016; Name=EY650016; organism=Citrus sinensis; type=EST; length=948bp
CCACGCGTCCGTACTGCTTCAATTCTTCACCAATTGAAAGAAGCAAAGTT
TCTGAAACCTGATTTAGTGAAAAATGGCACAAGCTATGGCGTCAATGGCT
GGCTTACGTGGATCCTCCCACTCGCAGGCTGTTCTTGAAGGTAGCTCCCA
GCTCAGTGGCCCAAACCGCTTGAACGCCCCTAGCAACAGCAGAGTTGCTG
TGGCTCGCTCTGGTTTCACTGTTAGAGCCCAGCAGGCATCAAACGAGCCT
GAAACTAGCCGCCGTGCTATGATTGGTCTTGTTGCTGCAGGTGTGGCCTC
AGGTTCCTTTGTTCAAGCTGTACTTGCTGATGCCACTCCCATCAAAGTTG
GTCCTCCTCCTCCACCCTCTGGCGGATTGCCTGGAACGTTGAACTCTGAT
GAGCCAAGAGACCTGGATCTGCCACTGAAGGAGAGGTTCTTCATCCAACC
ACTTAGTCCAGCCCAGGCGGCAGAGAGAGCAAAGGCGTCAGCAAAGGATA
TTCTTAATGTCAAGGAATTAATAGACAAGAAGGCCTGGCCCTATGTTCAG
AATGATCTCCGTCTCAGGGCCTCATACCTTCGCTATGACCTCAACACTAT
CATTTCTGCTAAGCCCAAAGATGAGAAACAATCCCTCAAGAACCTCACTG
GATAGCTCTTCCAGAACCATCGGCATCTTGACCATGCGGCAAAGATTAGA
GCACTCCTGAAGCAGAGAATACTATGCTGAGACTGTATCTACCCTGAACG
ATGNTCTCTNCAAGGTTGGCTAAGCAGAATTATATAATCTGATGTAACTA
TATTTTNCATTTGTGAAGCACAAACTCTGTGAATTTATTGCAAGCTGGCG
TCCGCTCAAGTATCGAGATTATTNGTCCAGGGTGAATGTCTATATTTAAA
CTGCTAGAACTGGNCAGCAGCCCTCAAAAAAAAAAAAGGCGGNCGTCT
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