EY650008

Overview
NameEY650008
Unique NameEY650008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650008_ssr706 microsatellite EY650008_ssr706:706..717. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1647 contig Csv1_Contig1647:537..1443. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 7.156e-94
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKKEVPCETDQLTHVYT ++RPDATYSILIDN EKQ+GSLY+DWDLLPPK IKDP+AKKPEDWD+KEYIPDPEDKKPEGYDDIPKEI                     PTI NPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDP++YVYPNLKYVGIELWQVKSGT+FDNVL+ +DP YAK+LAEETWG
Sbjct:  155 NHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPKKIKDPEAKKPEDWDEKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPEIYVYPNLKYVGIELWQVKSGTLFDNVLICNDPEYAKQLAEETWG 350          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 7.156e-94
Identity = 156/196 (79.59%), Postives = 167/196 (85.20%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKKEVPCETDQLTHVYTFILRPDATYSILIDN EKQSGSLYSDWDLLPPKTIKDP AKKPEDWD+KE+I DPEDKKPEGYDDIP+EI                     PTIPNPEYKGPWKPKKIKNPNYKGKWKAP+IDNPDFKDDPDLYV+P LKYVG+ELWQVKSGT+FDN+++ DDP YAK +AEETWG
Sbjct:  162 NHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPSAKKPEDWDEKEFIDDPEDKKPEGYDDIPEEITDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKPKKIKNPNYKGKWKAPLIDNPDFKDDPDLYVFPKLKYVGVELWQVKSGTLFDNIVICDDPEYAKAIAEETWG 357          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.346e-94
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKK+VPCETDQLTHVYTFILRPDA+YSILIDN EKQSGS+Y+DWD+LPPK IKDP+AKKPEDW+DKEYIPDPEDKKPEGYDDIPKEI                     PTIPNP+YKG WKPKKIKNPN+KGKWKAPMIDNPDFKDDPD+YV+P LKYVGIELWQVKSGTMFDNVL+ DDP YAKKLAEETWG
Sbjct:  157 NHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPKQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYDDIPKEITDPEAKKPEDWDDEEDGEWTAPTIPNPDYKGEWKPKKIKNPNFKGKWKAPMIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTMFDNVLICDDPDYAKKLAEETWG 352          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.763e-92
Identity = 153/196 (78.06%), Postives = 169/196 (86.22%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKK+VPCETDQLTHVYTFI+RPDATYSILIDN EKQ+GSLYSDWDLLP K IKDP+AKKPEDW+D+EYIPDPEDKKPEGYDDIPKEI                     PTIPNPEYKG WKPKKIKNPN+KGKWKAP+IDNP+FKDDP+LYVYPNLKYVGIELWQVKSGT+FDN+L++D+P YAK+LAEETWG
Sbjct:  159 NNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAKKIKDPEAKKPEDWEDQEYIPDPEDKKPEGYDDIPKEITDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGEWKPKKIKNPNFKGKWKAPLIDNPEFKDDPELYVYPNLKYVGIELWQVKSGTLFDNILITDEPEYAKQLAEETWG 354          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.927e-92
Identity = 155/196 (79.08%), Postives = 166/196 (84.69%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ+GSLY+DWDLLP K IKDP+AKKPEDWDDKE+IPDPEDKKPEGYDDIP EI                     PTIPNPEYKGPWK KKIKNPNYKGKWKAPMIDNP+FKDDP+LYVYP L+YVG+ELWQVKSGT+FDNVLV DDP YAK+LAEETWG
Sbjct:  160 NHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAKKIKDPEAKKPEDWDDKEFIPDPEDKKPEGYDDIPAEITDPEAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKAKKIKNPNYKGKWKAPMIDNPEFKDDPELYVYPKLRYVGVELWQVKSGTLFDNVLVCDDPEYAKQLAEETWG 355          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.545e-91
Identity = 155/196 (79.08%), Postives = 163/196 (83.16%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKKEVPCETDQLTHVYTF+LRPDATYSILIDN EKQ+GSLYSDWDLLP K IKDP AKKPEDWDDKEYIPDPED KP GYDDIPKEI                     PTIPNPEY G WKPKKIKNP YKGKWKAPMIDNP+FKDDP+LYV+P LKYVG+ELWQVKSG++FDNVLVSDDP YAKKLAEETWG
Sbjct:  157 NHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDWDDEEDGEWTAPTIPNPEYNGEWKPKKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWG 352          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3)

HSP 1 Score: 331.257 bits (848), Expect = 4.800e-90
Identity = 150/196 (76.53%), Postives = 165/196 (84.18%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ+GSLYSDWDLLPPK IKDP AKKPEDWD++EYI DPEDKKP+GYDDIPKEI                     PTIPNPEY G WKPK+IKNPNYKGKW+AP+IDNPDFKDDP+LYV+P LKYVG+ELWQVKSG++FDNVL+ DDP YAKKLA+ETWG
Sbjct:  157 NHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEIPDTDSKKPEDWDDEEDGEWTAPTIPNPEYMGEWKPKQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPDYAKKLADETWG 352          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.307e-87
Identity = 144/196 (73.47%), Postives = 161/196 (82.14%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKK+VPC+TDQLTHVYTFI+RPDATYSILIDN EK +GS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI                     PTIPNPEYKGPWK KKIKNPNY+GKWKAPMIDNPDFKDDP +Y + +LKY+GIELWQVKSGT+FDN++++DDP  AK  AEETWG
Sbjct:  160 NHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWG 355          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 1.107e-86
Identity = 144/196 (73.47%), Postives = 159/196 (81.12%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEETWG 588
            N LIKK+VPCETDQL+HVYT I+ PDATY+ILIDN EKQSGS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI                     PTIPNPEYKGPWK KKIKNPNY+GKWKAPMIDNPDFKDDP +Y + +LKY+GIELWQVKSGT+FDN L++DDP  AK  AEETWG
Sbjct:  164 NHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWG 359          
BLAST of EY650008 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.229e-69
Identity = 114/193 (59.07%), Postives = 145/193 (75.13%), Query Frame = 1
Query:    1 NKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPXYAKKLAEE 579
            N  IKK++ CETD+L H YTFILRPDA+YS+L+DN E++ GS+Y+DWD+LPP+ IK  +AKKPEDWDD+EYI DP D KPEG+D IP+EI                     P IPN  YKGPWK K+IKNPNYKGKWK P IDNP+F+DDPDLYV  ++KY GIE+WQVK+G++FDN+L+ DDP YA+ + ++
Sbjct:  163 NYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDSIPREIPDRKAKEPEDWDEEENGLWEPPKIPNSAYKGPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPAYARSIVDD 355          
The following BLAST results are available for this feature:
BLAST of EY650008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
CALR_RICCO7.156e-9479.59Calreticulin OS=Ricinus communis PE=2 SV=1[more]
CALR_NICPL7.156e-9479.59Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 ... [more]
CALR_BERST9.346e-9479.59Calreticulin OS=Berberis stolonifera PE=2 SV=1[more]
CALR_PRUAR1.763e-9278.06Calreticulin OS=Prunus armeniaca PE=2 SV=1[more]
CALR_BETVU3.927e-9279.08Calreticulin OS=Beta vulgaris PE=2 SV=1[more]
CALR1_ARATH2.545e-9179.08Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=... [more]
CALR2_ARATH4.800e-9076.53Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=... [more]
CALR_MAIZE1.307e-8773.47Calreticulin OS=Zea mays GN=CRT PE=2 SV=1[more]
CALR_ORYSJ1.107e-8673.47Calreticulin OS=Oryza sativa subsp. japonica GN=Os... [more]
CALR3_ARATH1.229e-6959.07Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650008 ID=EY650008; Name=EY650008; organism=Citrus sinensis; type=EST; length=908bp
AACAAATTGATCAAGAAGGAAGTACCATGTGAGACTGACCAACTCACTCA
TGTTTATACTTTCATCCTCCGTCCAGATGCTACTTACAGCATCCTCATTG
ACAATGCGGAGAAACAATCTGGTAGCTTGTACTCTGATTGGGATCTCCTC
CCTCCAAAGACCATCAAGGATCCTGACGCCAAGAAACCTGAAGACTGGGA
TGACAAAGAATATATTCCCGATCCTGAAGACAAGAAGCCAGAGGGCTATG
ATGACATTCCAAAGGAGATAACAGATCCTGATGCCAAGAAGCCTGATGAT
TGGGATGATGAGGAAGATGGTGAATGGACAGCTCCAACCATCCCTAACCC
AGAGTACAAGGGTCCATGGAAGCCAAAGAAAATTAAGAACCCTAATTACA
AGGGCAAGTGGAAGGCTCCAATGATCGACAACCCGGATTTCAAGGATGAC
CCAGACCTTTATGTGTATCCCAACTTGAAGTATGTTGGCATTGAGTTGTG
GCAGGTGAAATCTGGAACCATGTTTGACAATGTCTTGGTTAGTGATGATC
CANAGTATGCCAAGAAGTTGGCCGAAGAAACATGGGGAAAGCATAAGGAT
GCCGAGAAGGCAGCATTTGATGAGGCTGAGAAAAANAGAGAGGAGGAGGA
ATCAAAGGACGCACCTGATTCTGATGCTGAGGGATATGATGACGATGACA
CTGAAGATGATGATGATGCTGATGCTGAAACCAAATCAGACTCCAGCAGC
GGAGACGCAGACCAGGATGTACATGATGAGCTGTNAGGGAAAATGCTATG
ATNAGCCCCGAGAATTTGGGGCGTAAGAGCTNCAAATTTTNCTGTTTTCT
ATTTTGATTTCAGCTTTAGGGACGTTNATTCTTNNAGAAGTGACCTGAGA
ATAAAANG
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