EY649999

Overview
NameEY649999
Unique NameEY649999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6952 contig Csv1_Contig6952:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY649999 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.711e-30
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1 
Query:  448 DPPFHQAYKSLI--------EDTSNNIFGKKLV-LVEECELPLIDLSRILHNDNVVDESKREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEAVKVFKQPFDKKSKEDKFMNFPAGXYRWGTPTATCLTSXRGAKLSH 846
            DPPF++ Y +L+         D S   F   +  +VEE ELP+ID+SR++       E +RE+CKE IARAS++WGFFQV NHGIS D+LEKMR+E ++VF++PFDKKSK +K   F AG YRWGTP+AT +     ++  H
Sbjct:    2 DPPFNEIYNNLLYNQITKKDNDVSEIPFSFSVTAVVEEVELPVIDVSRLIDGA----EEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEK---FSAGSYRWGTPSATSIRQLSWSEAFH 136

HSP 2 Score: 21.1718 bits (43), Expect = 1.711e-30
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 
Query:  839 FHIPMADIS 865
            FH+PM DIS
Sbjct:  135 FHVPMTDIS 143
[Close]
BLAST of EY649999 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 1 
Query:  439 MATDPPFHQAYKSLI-----EDTSNNIFGKKLVLVEECELPLIDLSRILHNDNVVDESKREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEAVKVFKQPFDKKSKEDKFMNFPAGXYRWGTPTAT 810
            MA+ PPF   + S+        TS +      +     +LP+IDLS +   + V    KR+ C +++  A+++WGFFQ+ NHGI KD+ E M  E  K+F QPF  K +E +F +     YRWG P+AT
Sbjct:    1 MASQPPFKTNFCSIFGSSFPNSTSESNTNTSTIQTSGIKLPVIDLSHLTSGEEV----KRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRE-RFSDLSKNSYRWGNPSAT 124
The following BLAST results are available for this feature:
BLAST of EY649999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
G2OX8_ARATH1.711e-3049.30Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX7_ARATH1.762e-1737.21Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-A10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649999 ID=EY649999; Name=EY649999; organism=Citrus sinensis; type=EST; length=876bp
CCCACGCGTCCGCCCACGCGTCCGTAATGGGGGGGGTGTATGTATCTCAG
CTCTCAACCCAACTTTTCCCTTATAACTACTTGTAGACGTAGACATTCCC
GTGCATTGTCATGCAAGTAACTCTATATCTTTCTCCTTGCTTATCTTTTA
TCTTTTATCATTTCAATGTTTGAATTCGTGGCCTTAATTATCGATTACTG
TAGAGTAAAGAAATAAATAAAAAGATTATTGAGTTGAGCTCTTTTTTTCT
TTTTTTTTGTTGGTGTGGGGGGGAGTCATGAGTGATATTAGGTTGTCATT
TTCAGTTTCCCTACAGCTAGACTGCAGAATTGGTTCTTACCAGCAGAAGT
CTTGCAGGAAGTGATGCATCCCTCATTCAAGAAAGTACAAATGCTGGAGT
CTGACAACTTCATCACAGAATTAAACCAGCCACTAAACATGGCCACGGAC
CCACCATTTCACCAAGCTTACAAGTCCCTCATCGAAGATACCTCAAACAA
TATCTTTGGCAAGAAGCTTGTACTTGTTGAGGAATGTGAGCTTCCGCTGA
TTGATCTTAGCCGAATACTTCATAATGATAACGTCGTCGACGAATCAAAA
AGAGAAGAGTGCAAGGAGGAGATAGCTAGGGCTTCTCAGCAATGGGGTTT
TTTCCAAGTTACTAATCATGGGATTTCAAAAGATTTACTGGAGAAGATGA
GAGAAGAAGCAGTGAAAGTTTTCAAGCAGCCTTTTGATAAGAAAAGCAAA
GAAGACAAGTTCATGAATTTCCCAGCTGGCANGTACCGCTGGGGGACACC
AACGGCCACATGTCTCACCAGTNATCGTGGTGCGAAACTTTCACATTCCT
ATGGCCGATATCTCTGCTTCTGCTCT
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