EY649996

Overview
NameEY649996
Unique NameEY649996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1030 contig Csv1_Contig1030:482..1172. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_VITVI (Histone H3.3 OS=Vitis vinifera PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_PINPS (Histone H3.3 OS=Pinus pinaster PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY649996 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 3 
Query:    6 RPAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 302
            + APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   28 KSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
The following BLAST results are available for this feature:
BLAST of EY649996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
H33_VITVI4.619e-4997.98Histone H3.3 OS=Vitis vinifera PE=2 SV=3[more]
H33_TOBAC4.619e-4997.98Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1[more]
H33_PINPS4.619e-4997.98Histone H3.3 OS=Pinus pinaster PE=2 SV=3[more]
H33_ORYSJ4.619e-4997.98Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3... [more]
H33_ORYSI4.619e-4997.98Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_... [more]
H33_ORYCO4.619e-4997.98Histone H3.3 OS=Oryza coarctata PE=2 SV=3[more]
H33_MEDSA4.619e-4997.98Histone H3.3 OS=Medicago sativa PE=1 SV=2[more]
H33_LOLTE4.619e-4997.98Histone H3.3 OS=Lolium temulentum PE=2 SV=2[more]
H33_LOLMU4.619e-4997.98Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=... [more]
H33_GOSHI4.619e-4997.98Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-A07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649996 ID=EY649996; Name=EY649996; organism=Citrus sinensis; type=EST; length=705bp
CCACGCGTCCGGCGCCCACCACCGGTGGTGTTAAGAAGCCTCATCGTTAC
CGTCCTGGAACCGTCGCCCTTCGAGAAATTCGCAAGTACCAGAAGAGTAC
CGAGCTGCTTATCAGGAAACTCCCATTCCAGAGACTTGTTCGTGAAATTG
CTCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCAGTACTGGCC
CTGCAGGAGGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGAGGACACTAA
CCTCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCAAGGACATAC
AGCTTGCCCGTAGGATCCGTGGCGAGCGTGCTTAAGCGTAATTGCTGCTT
GCTTCAATTGAATGACTGGAAGGGAAGGGGGAAGTTGTAATGTGTTAATT
TGTACGTGGGGGTTGGTGGGGGTAGATAGGGGTTAGGATNNCAGTNNTTA
TTANAATATGGCTTTTGTCATCATCTGGGTTTGTTTTTGGTGGTGTTTTA
TAATGTCTATTTGTTGATGATGGGGATGTTAATTCGCCATAAGAGACTGG
CTTTTATGTGTTCTTTTGGATACCTGTTGCCCAATAGTGGTGGTGTTGAA
CATCTCTATTATTGTGCTTCTAATCTAAAGTTAGTTTGTTATTTATTGTT
CTTTTATGAAAATGATTCAATGTTGTTTGTTGATAATAAAAAAAAAAAAA
AAAGG
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