EY649986

Overview
NameEY649986
Unique NameEY649986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12716 contig Csv1_Contig12716:19..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.852e-28
Identity = 59/130 (45.38%), Postives = 86/130 (66.15%), Query Frame = 3
Query:  159 PNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 548
            PN   + ++GRVYCDTC+AGF T  T YIAGAKV++ECK   + ++  + +G TD+TGTY I + + H++ +C  VL++SP+ DC  V   R+R+ V+LT   GIS   R AN +G+ K  P+  CA +L
Sbjct:   30 PNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVPLPVCAALL 159          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26
Identity = 55/128 (42.97%), Postives = 84/128 (65.62%), Query Frame = 3
Query:  174 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPG---RERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 548
            F VEG+VYCD C+  F T  +TY+ GAKV +EC++R+   ++YS + +TD +GTY+I V  DH++++C+  L  S   DC  V+     ++ +R+ LT  NGIS+  R AN +GFMK +P+  CA+ L
Sbjct:   27 FFVEGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKPLPECAKAL 154          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25
Identity = 52/125 (41.60%), Postives = 79/125 (63.20%), Query Frame = 3
Query:  174 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 548
            F VEG+VYCDTC+  FET  +  + GA VK++C++  +    +S EG TD  G YK+ V+ DH++ +C+  ++ SP+ DCK    G E++R+  +   GI +  R+AN + FMKAE + GC E L
Sbjct:   27 FDVEGKVYCDTCRVQFETKLSENLEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAESVQGCKEAL 151          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25
Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = 3
Query:  174 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLMLYXRR 566
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS NGI  +  RYAN + F + EP+  C  +L  Y  R
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLKECGGILQAYDLR 137          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24
Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 3
Query:  174 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLMLY 557
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS  GI  +  RYAN + F + EP+  C  +L  Y
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLKECGGILQAY 134          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.312e-23
Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 3
Query:  174 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAP---GRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 548
            F V+G VYCDTC+  F T  +T + GA VK+EC++  +    +  E  TD  G Y I V+ D +D +C+  L+ SP ++C  V+     ++ ++V LTS NG +S+ R AN++GFM+ EP+  C EVL
Sbjct:   30 FKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEPLKECPEVL 157          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22
Identity = 46/130 (35.38%), Postives = 76/130 (58.46%), Query Frame = 3
Query:  156 RPNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEV 545
            +P    F ++G+VYCDTC+AGF T  + +I GA ++++CKD+++  V ++  G T + G Y +LV  DH+++ C+  LISS + DC  +         +    N ++  TR  N +GF K E +  CA+V
Sbjct:    5 QPPVSQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKEALPKCAQV 134          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.467e-19
Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  156 RPNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEV 545
            +P    F ++G+VYCDTC+A F T  + +I GA V+++CKD ++ +V ++  G T + G Y +L+  DH+++ C+  LISS + DC  +         +    N ++  TR  N +GF+K E +  C +V
Sbjct:    5 QPPVSQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTINPLGFLKKEVLPKCPQV 134          
BLAST of EY649986 vs. ExPASy Swiss-Prot
Match: PLAL1_PLALA (Major pollen allergen Pla l 1 OS=Plantago lanceolata PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  174 FSVEGRVYCDTCQA-GFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTV---APGR-ERSRVILTSYNGISSETRYANSMGFMKAEPMSGC 536
            F VEG VYC+ C +       +  +AGA+V+++CKD  S +V+YS  G+TD  G Y++ V   H+D  C+  L+ S + DC  +   A G  + S+V L+    I+ +TR+   + F       GC
Sbjct:    9 FHVEGEVYCNVCHSRNLINELSERMAGAQVQLDCKD-DSKKVIYSIGGETDQDGVYRLPVVGYHED--CEIKLVKSSRPDCSEIPKLAKGTIQTSKVDLSKNTTITEKTRHVKPLSFRAKTDAPGC 131          
The following BLAST results are available for this feature:
BLAST of EY649986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PSC13_MAIZE3.852e-2845.38Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE... [more]
OLEE1_BETVE1.239e-2642.97Olee1-like protein OS=Betula verrucosa PE=2 SV=1[more]
LAT52_SOLLC1.049e-2541.60Anther-specific protein LAT52 OS=Solanum lycopersi... [more]
PHLB_PHLPR3.986e-2542.42Pollen allergen Phl p 11 OS=Phleum pratense PE=1 S... [more]
LOLB_LOLPR4.408e-2441.86Major pollen allergen Lol p 11 OS=Lolium perenne P... [more]
CHE1_CHEAL8.312e-2340.63Pollen allergen Che a 1 OS=Chenopodium album PE=1 ... [more]
ALL1_OLEEU7.037e-2235.38Major pollen allergen OS=Olea europaea PE=1 SV=2[more]
LIGV1_LIGVU1.467e-1933.85Major pollen allergen Lig v 1 OS=Ligustrum vulgare... [more]
PLAL1_PLALA1.921e-1134.13Major pollen allergen Pla l 1 OS=Plantago lanceola... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-H04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649986 ID=EY649986; Name=EY649986; organism=Citrus sinensis; type=EST; length=752bp
CCACGCGTCCGGTGCGTGGTCCGCTTCTGTCTAGAATTCACTCATTTGCT
CTCAATATTCAATCTTGTTCAGCTTCCTTCATCTCCCATAAGACAATGGC
TAGAACATTGTTGTTGATCGCTCTCTGCGTGCTGCCGGCTCTGGTGAGCG
CGGTCCGGCCCAACACTAAACCGTTCTCGGTTGAAGGACGCGTGTACTGC
GACACCTGCCAAGCCGGCTTTGAGACCCCCGCTACCACCTACATCGCCGG
TGCCAAGGTTAAGGTTGAATGCAAAGACAGGAAGTCAATGCAAGTAGTAT
ATAGCAGGGAAGGGAAAACAGACTCAACTGGAACATATAAGATCCTCGTT
TCAGAAGACCATCAGGATCAACTTTGCGATGCTGTCCTCATTAGTAGCCC
CCAGAATGACTGCAAAACAGTTGCCCCAGGGCGTGAGCGTTCCCGTGTGA
TCTTGACCAGTTACAACGGCATTTCTTCTGAAACCCGATATGCCAATTCA
ATGGGCTTCATGAAGGCAGAGCCCATGTCTGGCTGTGCTGAGGTTCTCAT
GCTATATANGAGGAGGATGTGTAGAGAATGGTGTGGCATGGTTTTTTCTA
TCGCTTTCCATTTGTTTAAGCTNTGTGTTGCCTTATACTGTCTCTTCTAT
TAGTAGTGCCCGGATGGGCTGTGTTGTTTCTATGTTTAGAAGATTCTTAA
TTTGTTGTTAAAGGACGCGTACGCTATTAATTTATTTAAAAAAAAAAAAA
AA
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