EY649980

Overview
NameEY649980
Unique NameEY649980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649980 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17
Identity = 50/159 (31.45%), Postives = 86/159 (54.09%), Query Frame = 3
Query:   18 RPHILVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYDHKRVVESLEGKNDLG--EQIHLVSIPDGM--EPWEDRNDLGKLTEKFLQVMPGKLAELIEEINSRED-EKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 479
            +PH++ +P PAQGH+ P++  ++ L   GF VTFVNT Y+H R + S  G N L         SI DG+     +   D+  L E  ++       EL++ IN+ ++   + C ++DG M+++++VA+++ V   LFW +S  +     H    I+ G+
Sbjct:   11 KPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRS-RGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGL 168          
BLAST of EY649980 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12
Identity = 41/163 (25.15%), Postives = 81/163 (49.69%), Query Frame = 3
Query:   21 PHILVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYDHKRVVE-----SLEGKNDLGEQIHLVSIPDGMEPWEDRNDLGKLTEKF----LQVMPGKLAELIEEINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 482
            PH++++P P QGHV PL++ ++ L   G RVTFV T Y+++R++      ++        +  +  I DG+     +ND+G L +      L      L  L +E+  ++   + C + D  M ++   A++  +    F+ +SA  +    H  +L++ G++
Sbjct:   11 PHVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLSLSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLV 173          
The following BLAST results are available for this feature:
BLAST of EY649980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COGT2_ARATH2.210e-1731.45Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI1.255e-1225.15Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-G09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649980 ID=EY649980; Name=EY649980; organism=Citrus sinensis; type=EST; length=857bp
ATAGAAAAGAAATGAGCCGTCCACATATTTTGGTAATGCCAGCTCCAGCA
CAAGGCCATGTAATTCCTTTACTGGAGTTTTCACAATGTCTGGCAAAACA
TGGCTTCCGAGTCACATTTGTTAACACGGATTACGATCACAAGCGGGTAG
TGGAATCATTGGAGGGAAAGAATGATCTTGGGGAGCAAATCCATTTGGTT
TCGATACCAGATGGAATGGAACCCTGGGAAGATAGAAACGATTTGGGAAA
GCTAACTGAAAAGTTTTTACAGGTTATGCCGGGGAAGCTGGCGGAGCTCA
TAGAAGAGATCAACAGTAGAGAAGATGAAAAACTTGATTGTTTCATTGCA
GATGGGTACATGGCTTGGTCTATGGAAGTAGCAAAAAAGATGAATGTCAG
GGGGGCTCTCTTTTGGCCTTCATCAGCAGCATCAGTGGCCCTGCTATTTC
ATATCCCCAAACTTATTGATGATGGAATCATTGACAGTCATGGAACTCCG
ATGAGCAAGCAGATGTTTCGGATTGCACCAAATATGCCTGAAATGAACGC
TGGAGACTGTTTTTGGACAGACATGGGTGATTTGACCACGGAGAGAATTC
TTTTTGATTTAGCGGATAAAGACTTAAAAGCCATGAGAGCGGTAAATTCC
AGTTGTGTCACTCAACGTATGAGCTCGAGGCTGGGGCATTAACCGTGGTT
CCGGAACTTCTGCCATANGACCACTTTTGGCAGCAACCGTCNTAGGATAC
ACAGGACACTTCTGGCGCAAACTNCAGCTGTTTGTGGAGTGGCTAGACAA
CAGCACCAAGCTCTGTCATTACGCTGCTTTNGGCAGCTTACATCTTGACC
AANTCAG
back to top