EY649968

Overview
NameEY649968
Unique NameEY649968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.069e-47
Identity = 96/139 (69.06%), Postives = 107/139 (76.98%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGIKLAGG------CKRRKGRTSK 410
            EED+IL+ YI++NGEGSWRSLPKNAGL RCGKSCRLRWINYLR+DLKRGNIT EEEE +VKLHS+LGNRWSLIA  LPGRTDNEIKNYWNSHLSRK  +F      P  S D+S   +  A         KRR GRTS+
Sbjct:   20 EEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNF---IRKPSISQDVSAVIMTNASSAPPPPQAKRRLGRTSR 155          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.145e-45
Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFS----FTGPADDPLTSDDLSNNGIKLAGGCKRRKGRT 404
            EED++L  YI  +GEGSWRSLPKNAGLLRCGKSCRLRWINYLRAD+KRGNI+ EEE+ I+KLH++LGNRWSLIA+ LPGRTDNEIKNYWNSHLSR+  +    +T   DD   + D+S    KL    +RR GRT
Sbjct:   20 EEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYRRKYTAGPDDTAIAIDMS----KLQSADRRRGGRT 150          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.639e-42
Identity = 84/122 (68.85%), Postives = 97/122 (79.51%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGI 365
            AW  EEDE L  YIRA+GEG WRSLPK AGLLRCGKSCRLRWINYLR DLKRGN TA+E++ IVKLHS LGN+WSLIAA+LPGRTDNEIKNYWN+H+ RK     G   DP+T   ++ + +
Sbjct:   16 AWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRK---LLGRGIDPVTHRPIAADAV 134          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.710e-41
Identity = 90/155 (58.06%), Postives = 109/155 (70.32%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLT-----SDDLSNN-GIKLAGGCKRRKGRTSKVNSKKHKLALAS 446
            AW  EED+ LT YI+A+GEG WRSLPK AGLLRCGKSCRLRWINYLR DLKRGN + EE+E I+KLHS LGN+WSLIA +LPGRTDNEIKNYWN+H+ RK    T    DP+T     SD  ++N  I      +  KG   + +++  K A A+
Sbjct:   16 AWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRK---LTSRGIDPVTHRAINSDHAASNITISFESAQRDDKGAVFRRDAEPAKAAAAA 167          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.234e-41
Identity = 92/154 (59.74%), Postives = 107/154 (69.48%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGIKLAGGCKRRKGRT---SKVNSK----KHKLAL 440
            AW  EED+ L  YIRA+GEG WRSLPK AGLLRCGKSCRLRWINYLR DLKRGN T EE+E I+KLHS LGN+WSLIA +LPGRTDNEIKNYWN+H+ RK  S      DP T   +++      G   + +  T   S  NSK    KHK+A+
Sbjct:   16 AWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLS---RGIDPTTHRSIND------GTASQDQVTTISFSNANSKEEDTKHKVAV 160          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.976e-41
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFS 308
            AW  EED+ L  YIRA+GEG WRSLPK AGLLRCGKSCRLRWINYLR DLKRGN T EE+E I+KLHS LGN+WSLIA  LPGRTDNEIKNYWN+H+ RK  S
Sbjct:   16 AWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVS 118          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.499e-41
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            AW  EEDE L  YI+A+GEG WRSLPK AGLLRCGKSCRLRWINYLR DLKRGN T EE+E I+KLHS LGN+WSLIA +LPGRTDNEIKNYWN+H+ RK
Sbjct:   16 AWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRK 115          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.225e-40
Identity = 76/103 (73.79%), Postives = 87/103 (84.47%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFS 308
            AW  EED+ L  YIR +GEG WRSLPK+AGLLRCGKSCRLRWINYLR DLKRGN T +E++ I+KLHS LGN+WSLIA +LPGRTDNEIKNYWN+H+ RK  S
Sbjct:   16 AWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLS 118          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.502e-40
Identity = 75/103 (72.82%), Postives = 86/103 (83.50%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFS 308
            AW  EED++L  YIR +GEG WRSLP+ AGL RCGKSCRLRW+NYLR DLKRGN T EE+E I+KLHS LGN+WSLIA +LPGRTDNEIKNYWN+H+ RK  S
Sbjct:   16 AWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLS 118          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.385e-40
Identity = 79/126 (62.70%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTF------SFTGPADDPLTSDDLSNN 359
            AW  EED+ L  YI+A+GEG WRSLP++AGL RCGKSCRLRWINYLR DLKRGN T EE++ I+KLHS LGN+WSLIA +LPGRTDNEIKNYWN+H+ RK        +   P ++  TS D S++
Sbjct:   16 AWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKGIDPATHRPINETKTSQDSSDS 141          
The following BLAST results are available for this feature:
BLAST of EY649968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB12_ARATH6.069e-4769.06Transcription factor MYB12 OS=Arabidopsis thaliana... [more]
MYBP_MAIZE1.145e-4566.67Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
MYB38_MAIZE2.639e-4268.85Myb-related protein Zm38 OS=Zea mays PE=2 SV=1[more]
MYB1_HORVU1.710e-4158.06Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1... [more]
MYB08_ANTMA2.234e-4159.74Myb-related protein 308 OS=Antirrhinum majus GN=MY... [more]
MYB30_ANTMA4.976e-4176.70Myb-related protein 330 OS=Antirrhinum majus GN=MY... [more]
MYB4_ARATH6.499e-4178.00Transcription repressor MYB4 OS=Arabidopsis thalia... [more]
MYB6_ARATH3.225e-4073.79Transcription repressor MYB6 OS=Arabidopsis thalia... [more]
MYB3_ARATH5.502e-4072.82Transcription factor MYB3 OS=Arabidopsis thaliana ... [more]
MYB32_ARATH9.385e-4062.70Transcription factor MYB32 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-F05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649968 ID=EY649968; Name=EY649968; organism=Citrus sinensis; type=EST; length=868bp
CGGACGCGTGGGAAGAAGATGAAATTTTGACTAAATACATTCGAGCCAAT
GGAGAAGGATCTTGGAGATCATTACCCAAAAATGCAGGTTTGTTGAGATG
TGGCAAGAGCTGTAGACTGAGATGGATAAACTACTTAAGGGCTGACCTAA
AGAGAGGAAACATCACTGCTGAAGAGGAAGAAACAATTGTTAAGCTTCAT
TCGTCTTTGGGTAACAGGTGGTCTTTGATAGCTGCACAATTACCAGGCCG
AACAGACAATGAGATAAAGAATTATTGGAACTCCCATTTAAGCAGAAAAA
CATTCAGCTTCACAGGGCCCGCAGATGATCCATTAACAAGTGATGATTTG
AGTAATAACGGTATCAAGTTAGCCGGAGGATGCAAACGGAGGAAGGGCAG
AACCAGCAAAGTGAACTCAAAAAAGCACAAACTCGCATTGGCATCAATAG
GGATGCCTAAAACTAAAAGGGGAACCATAAGTGAAGTACTTGATCAGCAA
GTGACAGCAGATGAAAATAAGAGCAGCATTGGACAAGTTTCTTGCATGGC
AAGTGATGAATTTTGCTGTGGTGAAGCAAGCAGTGATCAGGCAAGTGGAT
TGTGCCTCAGCAAGGACATTGAGAGTGAAGTATTGGGACCGTACGAGTGG
CTGGATAGTGAAATAAAGCGAGTTAACAGTAGCCTTAACAGGGAAAAATG
CAGTGCAGAAGACGAAGTGAAAAGGGACCAAGACAAATGGGCAAAAGTGA
TGAAAGGAAAGCGTTTTTTGGGGGTCTAATGAGATGAAACTGTGACACAT
TTGATCCACATGATGAATNNGTCAGCTTGATNNGAGATGGCTTGTTTTAC
TGGCANCAGTGGGGCTGA
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