EY649948

Overview
NameEY649948
Unique NameEY649948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649948_ssr20 microsatellite EY649948_ssr20:20..41. BLAST: Citrus ESTs to Prunus persica proteins V1
EY649948_ssr9 microsatellite EY649948_ssr9:9..20. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649948 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.361e-75
Identity = 143/193 (74.09%), Postives = 162/193 (83.94%), Query Frame = 2
Query:  269 MSFDEMGFCGDMNFFSA-PLGDADMAVQP-SEPEATVEDDYTDEEMDVDELERRMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKMMALNAL-VQPAYLA*VCRTTLGSLXVAL 838
            M F+EMG CG+M+FFS+  LG+ D    P +EP++ VEDDYTD+E+DVDELERRMW+DKMR+KRLKEQ +GKEG+D AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE GKPVTGASDNLREWWKDKVRFDRNGPAAITKYQA+N++PG     N +   P  L  +  TTLGSL  AL
Sbjct:    1 MMFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSAL 193          
BLAST of EY649948 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.967e-69
Identity = 138/195 (70.77%), Postives = 157/195 (80.51%), Query Frame = 2
Query:  266 MMSFDEMGFCGDMNFFSAPLGDADMAVQPSEPEATVED-DYTDEEMDVDELERRMWKDKMRIKRLKEQ-SRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKMMALNALVQPA--YLA*VCRTTLGSLXVAL 838
            MM F+EMG  G+M+FFS+        +  +E E  VED DYTD+EMDVDELE+RMW+DKMR+KRLKEQ S+ KEG+D +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAI KYQ++N++ G     N+LV P    L  +  TTLGSL  AL
Sbjct:    1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKMRLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTLQELQDTTLGSLLSAL 195          
BLAST of EY649948 vs. ExPASy Swiss-Prot
Match: EIL3_ARATH (ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.870e-44
Identity = 89/155 (57.42%), Postives = 116/155 (74.84%), Query Frame = 2
Query:  323 LGDADMAV----QPSEPEATVED-----DYTDEEMDVDELERRMWKDKMRIKRLKE-QSRGKEGIDMAKQ-RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGK 754
            +GD  M+V      +EP+    D     D +DEE+D D+LERRMWKD++R+KR+KE Q  G +G    +  ++  +QA+RKKMSRAQDGILKYMLK+MEVCK +GFVYGIIPEKGKPV+G+SDN+R WWK+KV+FD+NGPAAI KY+ +    GK
Sbjct:    1 MGDLAMSVADIRMENEPDDLASDNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGK 155          
BLAST of EY649948 vs. ExPASy Swiss-Prot
Match: EIL2_ARATH (ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.161e-35
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 2
Query:  365 ATVEDDYTDEEMDVDELERRMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQ---EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAD 736
            A  +D  +DEEM+++ELE+++W+DK R+KRLKE ++   G  +  ++Q     E + ++ M +AQDGILKYM K ME  KAQGFVYGI+ E GK V G+SDNLREWWKDKVRFDRNGPAAI K+Q D
Sbjct:   34 ALCDDLSSDEEMEIEELEKKIWRDKQRLKRLKEMAKNGLGTRLLLKQQHDDFPEHSSKRTMYKAQDGILKYMSKTMERYKAQGFVYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQRD 160          
BLAST of EY649948 vs. ExPASy Swiss-Prot
Match: EIL4_ARATH (Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis thaliana GN=EIL4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.526e-35
Identity = 79/170 (46.47%), Postives = 115/170 (67.65%), Query Frame = 2
Query:  344 VQPSEPEATVEDDYTDEEMDVDELERRMWKDK-MRIKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKMMALNALVQPAYLA*VCR----TTLGSLXVAL 838
            V+  EP + ++D+  +EE+  D+L+RRMWKD+ +  K+LK+Q R    + ++      E +RRKKM+R+QD +LKYM+K+MEVCKA+GFVYGI+PEKGKP+TG+SD+LR WWK+ V+FD+N P AIT Y A  +       ++     + L  + +    TTLGSL  AL
Sbjct:    4 VEELEPLSPMDDE--EEEISYDDLKRRMWKDRNLMEKKLKQQKRHSNDV-VSFTTHRAEASRRKKMARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDAITDYLALAAAAAAAELIDKSSSSSSLLHMLQELQDTTLGSLLSAL 170          
BLAST of EY649948 vs. ExPASy Swiss-Prot
Match: EIL5_ARATH (ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana GN=EIL5 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.017e-31
Identity = 84/197 (42.64%), Postives = 113/197 (57.36%), Query Frame = 2
Query:  344 VQPSEPEATVED-DYTDEEMDVDELER------------RMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQ---------------EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKMMALNALVQP----AYLA*VCRTTLGSLXVAL 838
            VQ  EP + ++D D  D E DVDE ER            RMWKD+  + +LK+Q R      ++    S                E +RRKKM+R+QD +LKYM+K+MEVCKAQGFVYGI+PEKGKPVTG+SD+LR WWK+ V+FD+  P A++ Y        ++++ N  + P      L  +  TTLGSL  AL
Sbjct:    4 VQDLEPLSPIQDYDEDDLEEDVDEFERFGEEISYDDLKKRMWKDRNLMCKLKQQKRDNLNSVISSPSSSTSASSSSSSSVIVRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAPNAVSDYL--TLAAAQLISSNESLDPNSYIHMLHELQDTTLGSLLSAL 198          
The following BLAST results are available for this feature:
BLAST of EY649948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
EIN3_ARATH4.361e-7574.09Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH7.967e-6970.77ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
EIL3_ARATH8.870e-4457.42ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidops... [more]
EIL2_ARATH1.161e-3557.48ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidops... [more]
EIL4_ARATH7.526e-3546.47Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=... [more]
EIL5_ARATH1.017e-3142.64ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649948 ID=EY649948; Name=EY649948; organism=Citrus sinensis; type=EST; length=907bp
CTAAGCAGCTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTTTCTATTG
ACTTCTGAGTTGCTGCCCAAGACCCGTCTCTTCCATTCTGGTAAAAAGGG
TTGCGATACTCGGGCAACTTTGAAGTTTTAATACAGTTGTTGCTCATAGA
TAGTCAAGGGAAGGAGGTGGTTTTATTGCTTGAAGTTTTTTTGGTTATAG
TCCTATTAGATTAGCGAGAGACTTGCAAATTTGGAGTTTCTGTGGGTGTT
AACGCTGTGGGAATGATGATGAGTTTTGATGAGATGGGGTTTTGTGGTGA
CATGAACTTCTTCTCTGCTCCTCTGGGAGATGCAGATATGGCCGTCCAAC
CATCTGAACCGGAGGCTACCGTGGAGGATGATTATACTGATGAAGAGATG
GATGTTGATGAGCTTGAGAGGAGGATGTGGAAGGACAAAATGCGTATCAA
ACGGCTGAAAGAACAAAGCAGGGGCAAGGAGGGAATTGACATGGCCAAGC
AGCGTCAGTCGCAAGAGCAGGCAAGGAGGAAGAAGATGTCGAGGGCTCAA
GATGGGATCTTGAAATACATGTTAAAAATGATGGAAGTTTGTAAAGCTCA
AGGTTTTGTCTATGGGATTATTCCAGAGAAAGGAAAGCCTGTGACTGGGG
CATCTGACAATCTCCGTGAGTGGTGGAAGGATAAGGTTAGGTTTGATCGT
AATGGTCCGGCTGCTATAACTAAGTACCAAGCTGATAATTCAGTCCCTGG
CAAGATGATGGCATTAAACGCATTGGTCCAACCCGCATACCTTGCATGAG
TTTGCAGAACCACCCTTGGNTCACTNNCTGTCGCTCTATGCAGCACTGTG
ATCTNCTCANAGCNGTTNCTCTAGAAAAGGNTGTTCCCCCCATGTGGCCA
CTGAAAA
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