EY649941

Overview
NameEY649941
Unique NameEY649941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649941_ssr44 microsatellite EY649941_ssr44:44..57. BLAST: Citrus ESTs to Prunus persica proteins V1
EY649941_ssr703 microsatellite EY649941_ssr703:703..717. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10604 contig Csv1_Contig10604:3..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 5.077e-57
Identity = 107/158 (67.72%), Postives = 127/158 (80.38%), Query Frame = 3
Query:  132 TEPW-LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG 590
            TEPW + ENG+  + +K    E+R GRTAHNMSSSSLRKKSDL ++ K+ +  L+  L+N+QEVILGTKL++LFPAIP AII    G ++PW+F LSLLGLTPLAERVSFLTEQ+AFYTGPT+GGLLNATCGNATELIIAI AL   K+ VVKYS  G
Sbjct:    6 TEPWSVAENGNPSITAKGSSRELRLGRTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLG 163          

HSP 2 Score: 36.965 bits (84), Expect = 5.077e-57
Identity = 15/20 (75.00%), Postives = 19/20 (95.00%), Query Frame = 2
Query:  641 GXIANLRKEQKYDRKQADVN 700
            G IAN+R+EQ++DRKQADVN
Sbjct:  180 GGIANIRREQRFDRKQADVN 199          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.034e-52
Identity = 131/262 (50.00%), Postives = 157/262 (59.92%), Query Frame = 3
Query:  135 EPW--LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFGFHSLKPSSGSWHFALLVXGLPISERNKNTIENKPMSTRXXXXXXXXXXXXXXXSIRCGLL*FTA--------------KATLQLSRPAAL*CWIGYIAYLVFHL 860
            EPW  + ENG+  V +K    E+RHGRTAHNMSSSSLRKKSDL LV K+    L+  L+N+QEVILGTKL++LF AIPLAI+   + +  P +F LSL+GLTPLAERVSFLTEQ+AFYTGPTVGGLLNATCGNATELIIAI AL   K+ VVKYS  G  S+  +       LLV G  +       I N     R                + C LL                  K +L LSR +++   I YIAYL+F L
Sbjct:    6 EPWAAIAENGNANVTAKGSSRELRHGRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLG--SILSN------LLLVLGTSLF---FGGIANIRREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMSLTLSRTSSIVMLIAYIAYLIFQL 256          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.066e-49
Identity = 122/231 (52.81%), Postives = 143/231 (61.90%), Query Frame = 3
Query:  189 HGR--TAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG--FHSLKPSSGSWHFALLVXGLPIS---ERNKNTIENKPMSTRXXXXXXXXXXXXXXXSIRCGLL*FTAKATLQLSRPAAL*CWIGYIAYLVFHL 860
            HGR  TAHNMSSSSLRKKSD  LV K+    LR  LAN+QEV L TKL+VLFPA+PLAI  QCF F + WVFALSLLGL PLAERVSFLTEQIA YTGPTVGGLLNATCGNATELIIA+FAL + KI+VVK S  G    +L    G+  F   V  L      +RN++ +    +                  +    +   +A A+L LSR  +      Y+AYL F L
Sbjct:   19 HGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDLSRACSFVMLASYVAYLFFQL 249          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.655e-42
Identity = 111/252 (44.05%), Postives = 154/252 (61.11%), Query Frame = 3
Query:  144 LMENG---SVKVLSKEIRHGRTAHNMSSSSL-RKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG--FHSLKPSSGSWHFALLVXGLPISERNKNTIENKPMSTRXXXXXXXXXXXXXXXSIRCGLL*FTAKA-------TLQLSRPAAL*CWIGYIAYLVFHL 860
            L+ENG   S K  ++  R  R    +S+SSL RK+SDL L+S++R+  +RR L N+QEV+LGTKL +LFPA+PLA++   +     WVFALSLLGLTPLAER+SFLTEQIAF+TGPTVGGL+NATCGNATE+IIAI A+ +RK+ +VK S  G    +L    G+   +L + G+       N  +++    R                    ++ FT +A        + LSR ++    I Y+A+L+FHL
Sbjct:   14 LLENGGGGSDKPTAETSR--RVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGT---SLFLGGI------SNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHL 254          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.741e-41
Identity = 85/132 (64.39%), Postives = 101/132 (76.52%), Query Frame = 3
Query:  195 RTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG 590
            RTAHN+SSSSLRK SD +L+ K+    LR  LAN+ +V+L T+L +LFPA+ LAI      F + WVF LSL+GL PLAER+SFLTEQIAFYTGPTVGGLLNAT GN TE+IIA+ AL E KI+VVK S  G
Sbjct:   31 RTAHNLSSSSLRKSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLG 162          

HSP 2 Score: 28.4906 bits (62), Expect = 1.741e-41
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  647 IANLRKEQKYDRKQADVNS 703
            IANLR  Q YD KQA VN+
Sbjct:  181 IANLRAHQPYDTKQAHVNT 199          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.030e-28
Identity = 84/211 (39.81%), Postives = 114/211 (54.03%), Query Frame = 3
Query:  270 PCLRRCL----ANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG--FHSLKPSSGSWHFALLVXGLPISERNKNTIENKPMSTRXXXXXXXXXXXXXXXSIRCGLL*FT--------AKATLQLSRPAAL*CWIGYIAYLVFHL 860
            P LRR L    A +QEV+LGTKL  LF A+PLA+  +       WVFA SL+GL PLAERVSFL+E IA   GPT GG++NATCGN  ELIIA+FAL++ K++++K+S  G    +L    GS   +LL  G+       N  + +P+  R                I   +  +T        + + +QLSR  A+   I Y   L+F L
Sbjct:   59 PLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGS---SLLFGGI------VNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSSVMQLSRSCAIVMLIAYFGSLMFQL 260          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.245e-22
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 3
Query:  279 RRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFA-EPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG 590
            RR L +++ VIL  K++VL P  PLA++        + WVF  SL+G+TPLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL    I VV+ S  G
Sbjct:   58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLG 162          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.103e-21
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 3
Query:  288 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG 590
            L +I+ VI   KL++L P  PLAI+      ++ WVF L+L+G+TPLAER+ + TEQ+A YTGPTVGGLLNAT GN TELII+IFAL    I VV+ +  G
Sbjct:   65 LNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLG 165          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.119e-21
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 3
Query:  288 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG 590
            L + + VIL  KL++L P  PLAI+       + W+F LSL+G+TPLAER+ + TEQ+A YTG TVGGLLNAT GN TELII+IFAL    I VV+ +  G
Sbjct:   65 LQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLG 165          
BLAST of EY649941 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.180e-20
Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 3
Query:  288 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYSXFG 590
            L +I+ VI  +KL++L P  P +II          VF  S+LG+TPLAER+ + TEQ+A YTGPTVGGLLNAT GNATE+IIAI+AL    I VV+ S  G
Sbjct:   41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLG 141          
The following BLAST results are available for this feature:
BLAST of EY649941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CAX1_ARATH5.077e-5767.72Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX3_ARATH1.034e-5250.00Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1A_ORYSJ4.066e-4952.81Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH1.655e-4244.05Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ1.741e-4164.39Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ3.030e-2839.81Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX2_ORYSJ3.245e-2252.38Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]
CAX2_ARATH2.103e-2155.45Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]
CAX5_ARATH6.119e-2154.46Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX3_ORYSJ5.180e-2054.46Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-C09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649941 ID=EY649941; Name=EY649941; organism=Citrus sinensis; type=EST; length=902bp
CGGACGCGTGGGATTTTCTCTCTCAATCAATCTTTAATCAAAAATATATA
TATATATTTTTTATTATTAATTGTTTCTATCCTTCGTGTTTTTTTTTTTC
TTTCAATTGCATTTGTGAAAAAATGGCTTCGACTGAACCATGGCTGATGG
AGAATGGCAGCGTGAAGGTTTTGAGCAAGGAGATCAGACATGGAAGAACT
GCACACAACATGTCATCCTCCTCGTTGAGGAAAAAATCCGATCTTACCCT
TGTCTCGAAAATTCGATTCCCTTGTCTTAGACGGTGTCTGGCTAATATCC
AGGAGGTCATTTTGGGGACTAAACTTTCAGTTCTCTTTCCCGCCATTCCT
TTAGCCATAATCGGCCAGTGTTTTGGATTTGCAGAACCATGGGTATTCGC
TCTGAGCTTACTAGGACTGACTCCTCTGGCTGAACGTGTCAGCTTCTTGA
CAGAGCAAATTGCTTTCTACACTGGCCCAACAGTGGGGGGATTATTGAAC
GCGACATGCGGCAATGCCACGGAGCTCATCATAGCAATTTTTGCCCTATA
CGAACGTAAAATTGACGTGGTCAAATATTCTNCTTTTGGGTTCCATTCTC
TCAAACCTTCTTCTGGTTCTTGGCACTTCGCTCTTCTNGTGGANGGATTG
CCAATCTCAGAAAGGAACAAAAATACGATAGAAAACAAGCCGATGTCAAC
TCGCTGCTGCTGCTGCTGCCATTGCTGTGCCACATGTTACCATTGCTATT
CAATACGCTGCGGCCTCCTCTGATTTACTGCCAAGGCGACCCTTCAGCTA
TCAAGACCAGCAGCATTGTAATGCTGGATTGGNTACATCGCCTATCTCGT
CTTCCATTTGTGACACACCGGGAATTTTTTGAGCTCAAGAGATCAAAGAC
AC
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