EY649939

Overview
NameEY649939
Unique NameEY649939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649939_ssr191 microsatellite EY649939_ssr191:191..202. BLAST: Citrus ESTs to Prunus persica proteins V1
EY649939_ssr482 microsatellite EY649939_ssr482:482..499. BLAST: Citrus ESTs to Prunus persica proteins V1
EY649939_ssr60 microsatellite EY649939_ssr60:60..71. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.051e-50
Identity = 118/212 (55.66%), Postives = 135/212 (63.68%), Query Frame = 2
Query:  125 MINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQK----DNEEGDNK--------AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESXLIDLFDGSDYVPTYEDK 724
            MINFEATELRLGLP                           KRGF++TV DLKLNLS+     +  +     K         + KPPAKAQVVGWPPVRSFRKN+M+ QK    D  EG++K        +       VA+VKVSMDGAPYLRK+DLKLYK+YQ+LS+AL KMFSSFTIGN G QGMKDFMNES LIDL +GSDYVPTYEDK
Sbjct:    1 MINFEATELRLGLPGGNHGGEMAGKNNG-------------KRGFSETV-DLKLNLSSTAMDSVSKVDLENMKEK-------VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDK 191          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.919e-48
Identity = 117/216 (54.17%), Postives = 131/216 (60.65%), Query Frame = 2
Query:  128 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADT----------VVDLKLNLSTKESGGIDVI-------QKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESXLIDLFDGSDYVPTYEDK 724
            + FE TELRLGLP                           KRGF++T           VDL LNLS+KE+              KT  K  +   A D +KPPAK QVVGWPPVRSFRKN++AVQK   E   K       N +FVKVSMDGAPYLRKVDLK+YKSY+ELSD+LGKMFSSFT GNC SQGMKDFMNES L DL + SDYVPTYEDK
Sbjct:    1 MGFEETELRLGLPGNGGTEEVLIR----------------KRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPA-DPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEK---NSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDK 196          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.772e-47
Identity = 107/199 (53.77%), Postives = 130/199 (65.33%), Query Frame = 2
Query:  128 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESXLIDLFDGSDYVPTYEDK 724
            +N + TEL LGLP                           KRGF++TV DLKLNL + + G +D+   T G     T   D SKPPAKAQVVGWPPVR++RKN+MA QK  E    +A       VAFVKVSMDGAPYLRKVDLK+Y SY++LSDAL KMFSSFT+G+ G+QGM DFMNES ++DL + S+YVP+YEDK
Sbjct:    1 MNLKETELCLGLPGGTETVESPAKSGVGN-----------KRGFSETV-DLKLNLQSNKQGHVDL--NTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEA--EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDK 183          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.425e-45
Identity = 105/207 (50.72%), Postives = 131/207 (63.29%), Query Frame = 2
Query:  122 KMINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDN---EEGDNKAXXXXXXNVA---FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESXLIDLFDGSDYVPTYEDK 724
            +++N +ATEL LGLP                           KRGF++TV DL LNL + + G +D ++         T   D SKPPAKAQVVGWPPVR++RKN+M  QK +   EE  ++         A    VKVSMDGAPYLRKVDLK+YKSYQ+LSDAL KMFSSFT+GN G+QGM DFMNES L++L + S+YVP+YEDK
Sbjct:    4 QLMNLKATELCLGLPGGAEAVESPAKSAVGS-----------KRGFSETV-DLMLNLQSNKEGSVD-LKNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDK 197          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.612e-41
Identity = 112/237 (47.26%), Postives = 130/237 (54.85%), Query Frame = 2
Query:  134 FEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLST----------KESGG-------IDVI------------------QKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESXLIDLFDGSDYVPTYEDK 724
            FEATELRLGLP                           KRGFA+T+ DLKL L            KE          +D++                  +++  +S+  T A D  KP A KAQVVGWPPVRS+RKNI+AVQ    KD  +G            AFVKVSMDGAPYLRKVDLK+YKSY ELS AL KMFSSFTIGNCGS G+   MNES + DL +GS+YVPTYEDK
Sbjct:    7 FEATELRLGLPGGGGDGDAAAAAARSSSG---------KRGFAETI-DLKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDK 232          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.072e-38
Identity = 100/204 (49.02%), Postives = 120/204 (58.82%), Query Frame = 2
Query:  128 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLST----KESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG-NCGSQGMKDFMNESXLIDLFDGSDYVPTYEDK 724
            +N   TEL LGLP                           KRGF++TV DLKLNL+     KE      +     K  SA    D +KPPAKAQVVGWPPVRS+RKN+M   + +  G   A        AFVKVSMDGAPYLRK+DL++YKSY ELS+AL  MFSSFT+G + G +GM DFMNE  L+DL +  DYVP+YEDK
Sbjct:    7 LNLRETELCLGLPGGDTVAPVTGN----------------KRGFSETV-DLKLNLNNEPANKEGSTTHDVVTFDSKEKSAC-PKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAA--------AFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDK 184          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.975e-33
Identity = 97/232 (41.81%), Postives = 120/232 (51.72%), Query Frame = 2
Query:  128 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXM--------------------KRGFADTVVDLK-LNLSTKESGGIDVIQKTKGKSASATGATDLSK--------PPAKAQVVGWPPVRSFRKNIMA--VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESXLIDLFDGSDYVPTYEDK 724
            +NF+ATELRLGLP                          +                    KRGFADT  +   +  S +  GGI+++   K K  S +   + S         P AKAQVVGWPP+RS+RKN MA    K+ +E D K        V FVKVSMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+G CG  G   ++ M+E  L DL  GS++V TYEDK
Sbjct:   47 LNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGL----GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDK 274          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.611e-32
Identity = 82/176 (46.59%), Postives = 108/176 (61.36%), Query Frame = 2
Query:  248 KRGFADTV---VDLKLNLSTKESGGIDVIQKTKG-----------KSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQ-KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESXLIDLFDGSDYVPTYEDK 724
            KRGF+DT+    + K ++ T+++        T+            K  S+T     S P AKAQ+VGWPPVRS+RKN +A   K+++E D +          FVKVSMDGAPYLRKVDL+ Y +Y ELS AL KMF++FT+G CGS G   KD ++E+ L DL +G DYV TYEDK
Sbjct:  120 KRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDK 291          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.611e-32
Identity = 97/232 (41.81%), Postives = 121/232 (52.16%), Query Frame = 2
Query:  128 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNL----STKESGGIDVIQKTK------GKSASATGA--------TDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDN------KAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQG--MKDFMNESXLIDLFDGSDYVPTYEDKMEIGLLV 745
            +NF+ATELRLGLP                           KR F+D + D    +    ST  +G +      +      GKS + T          +  + P +KAQVVGWPP+RSFRKN MA  +  + G+N      +A         +VKVSM+GAPYLRK+DLK YKSY ELS AL KMFS FTIG  GS G   +D +NES L DL  GS+YV TYEDK    +LV
Sbjct:   38 LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGA--KRVFSDAINDSNKWVFSPGSTTATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLV 267          
BLAST of EY649939 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.132e-31
Identity = 91/213 (42.72%), Postives = 117/213 (54.93%), Query Frame = 2
Query:  140 ATELRLGLP----XXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSK---PPAKAQVVGWPPVRSFRKNIMAVQKDNEEG--DNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESXLIDLFDGSDYVPTYEDKMEIGLLV 745
            ATELRLGLP                               KRGFAD +V        + +GG     K    +A A    +  K   P AKAQVVGWPP+RS+RKN MA+ +   +G  D +A         +VKVSMDGAPYLRKVDLK+YK+Y+ELS AL KMFS FT+G+  S G   +D +++  L+DL +G++ V TYEDK E  +LV
Sbjct:   21 ATELRLGLPGTAEEAESEGGGGGGTDAAPLTLELLPKGGAKRGFADAIVGGPAGQRREAAGG-----KAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLV 228          
The following BLAST results are available for this feature:
BLAST of EY649939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
IAA16_ARATH2.051e-5055.66Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
AUX28_SOYBN1.919e-4854.17Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA14_ARATH2.772e-4753.77Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA7_ARATH4.425e-4550.72Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA30_ORYSJ6.612e-4147.26Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA17_ARATH3.072e-3849.02Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
IAA8_ARATH2.975e-3341.81Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA9_ARATH5.611e-3246.59Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA27_ARATH5.611e-3241.81Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA21_ORYSJ2.132e-3142.72Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-C07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649939 ID=EY649939; Name=EY649939; organism=Citrus sinensis; type=EST; length=876bp
ACTCTCGATGCCCTCTCAAAACACAAACAAACCAACCAAAAAAAAAAAAC
AGAGAGTGATAATTAATTAATTAAGAGAGGAGTTTAAGGAGTGTTTAGTG
TGTAAATTTGAAAGTTTCATTAAGATGATTAACTTCGAAGCGACGGAGCT
TCGGCTAGGGTTACCGGGCGGTAACGGCGGAAGCAGTGAAGGTGGTGGTG
GTGGCGGCGGCGGTGAGAAAGCCAAGAACAATAACATTAATGGCATGAAG
AGAGGATTTGCAGACACCGTTGTTGATTTGAAGCTAAATCTTTCAACAAA
AGAGTCAGGTGGGATTGATGTAATTCAGAAGACGAAGGGCAAAAGTGCTT
CTGCTACTGGGGCTACAGACCTTTCAAAGCCTCCGGCCAAGGCACAAGTT
GTGGGTTGGCCACCCGTTAGATCATTCAGAAAGAACATCATGGCCGTCCA
AAAGGACAATGAAGAAGGTGATAATAAGGCTAGCAGCAGCAGCAGCAGCA
ATGTAGCTTTTGTTAAAGTGAGCATGGATGGTGCCCCATACTTGCGCAAG
GTTGATTTGAAGCTATACAAAAGCTACCAAGAACTCTCTGATGCCCTTGG
CAAAATGTTCAGCTCTTTCACCATTGGTAACTGTGGGTCACAAGGGATGA
AGGATTTTATGAATGAGAGCANACTGATTGATCTTTTTGATGGCTCAGAT
TATGTACCTACTTATGAAGACAAGATGGAGATTGGACTGCTTGTGGTGAT
GTACATGGGATTTTGNNTTGTGATCATGCAACGCTTAGAAATATGAAAGA
TCCGAGGCATTNGACTGCACANGGNCATTNGAAANTGCAGAACCAACTGA
GATTTGATTTGATCAGCACTTTTGCC
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