EY649936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2) HSP 1 Score: 361.688 bits (927), Expect = 3.409e-99 Identity = 174/229 (75.98%), Postives = 197/229 (86.03%), Query Frame = 3 Query: 6 ASASLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPM--GMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 AS +LSSATPSQLCSSK GMF PS A L K R ++ GMK+ CQATSIPAD VPDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG + GGT AKDA+GND+IAA+WL TH PGDRTLT+GLKGDPTYLVVE DKTLA++GINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQ RVVRGPAPLSLALAH +V++GKVVFVPWTETDFRTGEAPWW+ Sbjct: 2 ASFTLSSATPSQLCSSKNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 9.918e-99 Identity = 170/229 (74.24%), Postives = 193/229 (84.28%), Query Frame = 3 Query: 6 ASASLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHAN--VENGKVVFVPWTETDFRTGEAPWWA 686 +S +LS TPSQLCS K G+ CPS A LVKP RTQM + GMKI CQATSIPADRVPDM KR+ +NLLLLGA+SLPT MLVPY +F PPG S+ GGT AKDA+GND++A +WL TH PGDRTLT+GLKGDPTYLVVEKD+TLA++ INAVCTHLGCVVP+N AENKFICPCHGSQYN+Q RVVRGPAPLSLALAH + VE+GKVVFVPW ETDFRTG+APWW+ Sbjct: 2 SSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 6.017e-96 Identity = 169/230 (73.48%), Postives = 193/230 (83.91%), Query Frame = 3 Query: 6 ASASLSSATPSQLCSSKGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 686 AS+SLS AT QL SS+ + S VKP + QMV K +G++I CQA+SIPADRVPDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG GGGT AKDA+GND++AA+WL THGPGDRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYN Q RVVRGPAPLSLALAHA++ E GKV+FVPW ETDFRTG+APWW+ Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 7.355e-94 Identity = 168/232 (72.41%), Postives = 190/232 (81.90%), Query Frame = 3 Query: 6 ASASLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 AS++LS TPSQLCSSK G+ S+A LVKP + + + MG MK KC A SIPAD RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG GT AKDA GND++ +WL TH PG RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQ +VVRGPAPLSLALAHA++++GKVVFVPW ETDFRTG++PWWA Sbjct: 2 ASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPADDRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 2.795e-93 Identity = 163/229 (71.18%), Postives = 185/229 (80.79%), Query Frame = 3 Query: 6 ASASLSSA-TPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 686 AS +LS+ TPSQL ++K G + PSRA L K AR K + K+ CQATSIPADRVPDMGKRQ MNLLLLGA+SLPT ML+PY FF PP GGG AKDA+GNDI+AA WL THGPGDRTL +GL+GDPTYLVVE D++LA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYNNQ +VVRGPAPLSLAL+H ++ E GKVVFVPW ETDFRTGE PWW+ Sbjct: 2 ASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLKTHGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWWS 230
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 8.132e-93 Identity = 169/232 (72.84%), Postives = 193/232 (83.19%), Query Frame = 3 Query: 6 ASASLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 AS++LS T QLCSSK G+ S+ L+KP + + + +G MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT MLVPYATFFAPPG GGT AKDA+GND+IA++WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQ RVVRGPAPLSLALAHA++++GKVVFVPW ETDFRTGEAPWWA Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2) HSP 1 Score: 336.265 bits (861), Expect = 1.534e-91 Identity = 167/232 (71.98%), Postives = 190/232 (81.90%), Query Frame = 3 Query: 6 ASASLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 AS++LS T QLCSSK G+ S+ LVKP + + + +G MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT MLVPY TFF PPG GGT AKDA+GND+IA++WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQ RVVRGPAPLSLALAHA++++GKVVFVPW ETDFRTGE PWWA Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_ORYSJ (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.344e-87 Identity = 159/229 (69.43%), Postives = 181/229 (79.04%), Query Frame = 3 Query: 6 ASASLSSAT-PSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 AS +LS+A+ P+QLC S+ + P + R I CQA +SIPADRVPDMGKRQLMNLLLLGA+SLPT MLVPY FF P G +AGGG AKD +GND++A +WL THGP DRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQ RVVRGPAPLSLAL HA+V++GKV+FVPW ETDFRTG+ PWWA Sbjct: 2 ASTALSTASNPTQLCRSRASLGKPVKGLGFGRERVPRTATT-----ITCQAASSIPADRVPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWWA 225
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_WHEAT (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Triticum aestivum GN=petC PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 8.151e-85 Identity = 151/227 (66.52%), Postives = 174/227 (76.65%), Query Frame = 3 Query: 6 ASASLSSAT-PSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 683 AS +LS+A+ P+QLC ++ C KP + + + I C A SI ADRVPDM KR+LMNLLLLGA+SLPT MLVPY +F P G S GG AKD +GNDI+ DWL THGP DRTL +GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKF+CPCHGSQYNNQ +VVRGPAPLSLAL HA+V++GKVVFVPW ETDFRTG+ PWW Sbjct: 2 ASTALSTASNPTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHGSQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWW 221
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_MICAN (Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis aeruginosa (strain NIES-843) GN=petC PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.968e-66 Identity = 115/171 (67.25%), Postives = 136/171 (79.53%), Query Frame = 3 Query: 177 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 686 VPD+G+RQ MNLL G ++ L P +F PP GGG TAKDA+GND+I + +L +H GDRTL +GLKGDPTYLVV++DKTLA+YGINAVCTHLGCVVPWN++E KF+CPCHGSQYN + +VVRGPAPLSLALAHANV +N KVVF WTETDFRTGE PWW+ Sbjct: 9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQFLTSHNAGDRTLAQGLKGDPTYLVVQEDKTLANYGINAVCTHLGCVVPWNASEEKFMCPCHGSQYNAEGKVVRGPAPLSLALAHANVTDNDKVVFSTWTETDFRTGEEPWWS 179 The following BLAST results are available for this feature:
BLAST of EY649936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649936 ID=EY649936; Name=EY649936; organism=Citrus sinensis; type=EST; length=929bpback to top |