EY649932

Overview
NameEY649932
Unique NameEY649932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649932_ssr7 microsatellite EY649932_ssr7:7..18. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 2.256e-87
Identity = 165/226 (73.01%), Postives = 179/226 (79.20%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            +AFG FDDSFSL S +AYLAEFISTLLFVFAGVGSAIA+ K+T+DAALD  GLVAIA+CH            NISGGHVNPAVTFGLA+GGQIT++TG+FYWIAQLLGS  A FLLK VTGGLAVPTH+                 TF LVYTVYATAADPKKGSLGTIAP+AIG IVGANILAAGPFSGGSMNPARSFGPAVA+G+F      WVGPLIGGGLAG
Sbjct:    4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 6.144e-85
Identity = 162/226 (71.68%), Postives = 174/226 (76.99%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IAFG   DSFS+GS KAY+AEFI+TLLFVFAGVGSAIA+NK+TADAALDP+GLVA+A+ H            NISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA  LLK VT GLAVPTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV +G+F      W GPLIGGGLAG
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 6.144e-85
Identity = 162/226 (71.68%), Postives = 174/226 (76.99%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IAFG   DSFS+GS KAY+AEFI+TLLFVFAGVGSAIA+NK+TADAALDP+GLVA+A+ H            NISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA  LLK VT GLAVPTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV +G+F      W GPLIGGGLAG
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.513e-83
Identity = 162/247 (65.59%), Postives = 179/247 (72.47%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAGAHLWHVSCTLTCPLSMTIXYS 824
            IAFG   DSFS+ S KAY+AEFI+TLLFVFAGVGSAIA+NK+T+DAALDP+GLVA+A+ H            N+SGGH+NPAVT GLA+GG ITILTG+FYWIAQ LGS VA  LLK VT GL+VPTH                  TF LVYTVYATAADPKKGSLG IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG+F      W GPLIGG LAG     V  T   PL  +  Y+
Sbjct:    4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFITAHAPLPTSEDYA 250          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 4.403e-83
Identity = 160/226 (70.80%), Postives = 176/226 (77.88%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IAFGRFDDSFS  S KAY+AEFISTL+FVFAGVGSAIA+ K+T  A LDP+GLVA+A+CH            NISGGHVNPAVTFGLALGGQITILTG+FYWIAQLLG+IV + L++  T G+A PTH                  TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANIL AGPFSGGSMNPARSFGPAVASG++      WVGPL+GGGLAG
Sbjct:    5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHG-LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAG 228          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.951e-80
Identity = 157/226 (69.47%), Postives = 171/226 (75.66%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            +AFG   DSFS  S KAY+AEFI+TLLFVFAGVGSAIA+ ++T   ALDP+GLVAIAI H            NISGGH+NPAVTFGLA+GG ITILTG+FYWIAQLLG+ +A  LLK VT G A+PTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+GNF      WVGPLIGGGLAG
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHG-VAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAG 228          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 1.015e-79
Identity = 155/226 (68.58%), Postives = 172/226 (76.11%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            +AFG F DS S  S KAY+AEFI+TLLFVFAGVGSAIA++++T   ALDP+GLVAIAI H            NISGGH+NPAVTFGLA+GG ITILTGI YW+AQLLG+ VA FLL+ VT G A+PTH                  TF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANILAAGPFSGGSMNPARSFGPAVA+GNF      WVGPL+GGGLAG
Sbjct:    4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-VSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAG 228          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.261e-79
Identity = 152/226 (67.26%), Postives = 170/226 (75.22%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            +AFG   DSFS+ S KAY+AEFI+TLLFVFAGVGSAIAF ++T   ALDP+GLVAIA+ H            N SGGH+NPAVTFGLA+GG IT+LTG+FYW+AQLLG+ VA  LL+ VT G A+PTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+ +F      WVGPLIGGGLAG
Sbjct:    4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 2.953e-79
Identity = 152/226 (67.26%), Postives = 168/226 (74.34%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            I  G   DSFS+ S KAYL+EFI+TLLFVFAGVGSA+AF K+T+DAALDP+GLVA+A+ H            NISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGSIVA  LL  VT G +VPTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV SG+F      WVGPL+GG LAG
Sbjct:    4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.466e-78
Identity = 154/226 (68.14%), Postives = 170/226 (75.22%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            +AFG   DSFS  S KAY+AEFI+TLLFVFAGVGSAIA+ ++T   ALDP+GLVAIAI H            NISGGH+NPAVTFGLA+GG ITILTG+FYW+AQLLG+ VA  LL  VT G A+PTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+G+F      WVGPL+GGGLAG
Sbjct:    4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTH-AVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAG 228          
The following BLAST results are available for this feature:
BLAST of EY649932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
TIP21_ARATH2.256e-8773.01Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP2_TOBAC6.144e-8571.68Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC6.144e-8571.68Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP_ANTMA1.513e-8365.59Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP22_ORYSJ4.403e-8370.80Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP21_ORYSJ5.951e-8069.47Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP23_MAIZE1.015e-7968.58Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP22_MAIZE2.261e-7967.26Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP22_ARATH2.953e-7967.26Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP21_MAIZE1.466e-7868.14Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649932 ID=EY649932; Name=EY649932; organism=Citrus sinensis; type=EST; length=920bp
ACCTTATCTTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTTTTTTTCC
TATTCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTT
CGATGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTA
TCTCAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTC
AACAAGGTGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCAT
AGCTATTTGCCATGGATTTGCTCTATTTGTCGCTGTTGCAGTTGGTGCTA
ACATCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTT
GGTGGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACT
TCTTGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGAT
TGGCAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGA
GTTGTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGC
CACGGCAGCTGACCCGAAGAAGGGATCATTGGGCACCATTGCACCCATTG
CCATTGGTTTCATTGTCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCC
GGTGGATCCATGAACCCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGG
CAACTTCCGGACAACTGGATCTANCTGGGTTGGCCCTCTCATTGGCGGCG
GGCTTGCGGGGGCTCATCTATGGCATGTGTCATGCACTCTGACATGCCCC
CTATCTATGACTATTNATTATAGTTAAACTTGTTTAAAAGTTNNAGTAAT
CATTTGACACCCTGCTCTGCTCTTTCTTTTTTGTATAAGAAGGAAAGCAG
CTTGCTCTTNCTCTTTCTTC
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