EY649930

Overview
NameEY649930
Unique NameEY649930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RECAM (Cytochrome c oxidase assembly protein ctaG OS=Reclinomonas americana GN=CTAG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.016e-22
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 2 
Query:  437 KSRKMLLYLTALV-FAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTKE 691
            K+RK +  L A V   M+G +Y +VPLYR FCQ TG+GGT Q  +   + +    KD     R + V+FN DV+D + WKF P ++
Sbjct:    3 KNRKSIAILIAAVSITMIGFSYGSVPLYRIFCQVTGFGGTTQVADLESDILT--LKDEQQENRIITVRFNGDVSDTMPWKFHPIQQ 86

HSP 2 Score: 46.9802 bits (110), Expect = 7.016e-22
Identity = 22/44 (50.00%), Postives = 25/44 (56.82%), Query Frame = 3 
Query:  756 SITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            SI G+STYNV P +A +YFNK   F        P    DMPVFF
Sbjct:  109 SIIGISTYNVNPQQAGIYFNKIQCFCFEEQRLKPHETIDMPVFF 152

HSP 3 Score: 30.4166 bits (67), Expect = 7.016e-22
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 1 
Query:  664 PMEVYSNQREVRVKPGESALAXYTAEN 744
            P + +  Q+E++V  GE+ALA Y+AEN
Sbjct:   78 PWKFHPIQQEIKVMVGETALAFYSAEN 104
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COX11_MOUSE (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Mus musculus GN=Cox11 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.190e-21
Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = 2 
Query:  308 CGYGSNMTNGYRKPQSFGSGCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDG-----TVTTREVVVQFNADVADGIQWKFIP 682
            CG     T   R+P+S            + FQR  A      ++++ +L Y+ A    M+G++YAAVPLYR +CQ TG GG+          +A HS D       V  R + V FNADV   +QW F P
Sbjct:   60 CGVRGPATQPPRRPRSS-----------NPFQR--AQEDEWRRRNKTVLTYVAAAAVGMLGASYAAVPLYRLYCQTTGLGGSA---------VAGHSSDQIENMVPVKDRVIKVTFNADVHASLQWNFRP 167

HSP 2 Score: 45.0542 bits (105), Expect = 9.190e-21
Identity = 20/43 (46.51%), Postives = 26/43 (60.47%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            + G+STYNV P +A  YFNK   F       +P+ + DMPVFF
Sbjct:  194 VIGISTYNVVPFEAGQYFNKIQCFCFEEQRLNPQEEVDMPVFF 236

HSP 3 Score: 29.261 bits (64), Expect = 9.190e-21
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1 
Query:  685 QREVRVKPGESALAXYTAENRSSTP 759
            Q E+ V PGE+ALA Y A+N +  P
Sbjct:  169 QTEIYVVPGETALAFYKAKNPTDKP 193
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: CO111_SCHPO (Rsm22-cox11 tandem protein 1, mitochondrial OS=Schizosaccharomyces pombe GN=cox1101 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 5.424e-20
Identity = 45/121 (37.19%), Postives = 57/121 (47.11%), Query Frame = 2 
Query:  332 NGYRKPQSFGS-GCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTV---QRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIP 682
            N +R P  F S  C    +    + R Y S        R  + YL A+    +G TYAAVPLYR FC  TGYGGT+   Q +   E  + R  KD     + + V FN DVA  + WK  P
Sbjct:  531 NSHRFPCIFTSFSCYNCISGTRKYSRQY-SRDKFHYNQRTTIYYLVAISIFALGLTYAAVPLYRLFCSKTGYGGTLNTDQSRMNAERMVPR--KD----NKRIRVTFNGDVAGNLSWKLWP 644

HSP 2 Score: 38.891 bits (89), Expect = 5.424e-20
Identity = 19/43 (44.19%), Postives = 24/43 (55.81%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            I GV+TYN+ P +AAVYF+K   F             D+PVFF
Sbjct:  671 IVGVATYNIVPGQAAVYFSKVACFCFEEQKLDAHEKVDLPVFF 713

HSP 3 Score: 34.2686 bits (77), Expect = 5.424e-20
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 
Query:  670 EVYSNQREVRVKPGESALAXYTAENRS 750
            +++  QRE+ V PGE+AL  YTAEN S
Sbjct:  641 KLWPQQREIYVLPGETALGFYTAENTS 667
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: CO112_SCHPO (Rsm22-cox11 tandem protein 2, mitochondrial OS=Schizosaccharomyces pombe GN=cos1102 PE=1 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 9.108e-20
Identity = 45/121 (37.19%), Postives = 57/121 (47.11%), Query Frame = 2 
Query:  332 NGYRKPQSFGS-GCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTV---QRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIP 682
            N +R P  F S  C    +   +  R Y S        R  + YL A+    +G TYAAVPLYR FC  TGYGGT+   Q +   E  + R  KD     + + V FN DVA  + WK  P
Sbjct:  531 NSHRFPCIFTSFSCYNCISGTRNISRQY-SRDKFHYNQRTTIYYLVAISIFALGLTYAAVPLYRLFCSKTGYGGTLNTDQSRMNAERMVPR--KD----NKRIRVTFNGDVAGNLSWKLWP 644

HSP 2 Score: 38.891 bits (89), Expect = 9.108e-20
Identity = 19/43 (44.19%), Postives = 24/43 (55.81%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            I GV+TYN+ P +AAVYF+K   F             D+PVFF
Sbjct:  671 IVGVATYNIVPGQAAVYFSKVACFCFEEQKLDAHEKVDLPVFF 713

HSP 3 Score: 34.2686 bits (77), Expect = 9.108e-20
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 
Query:  670 EVYSNQREVRVKPGESALAXYTAENRS 750
            +++  QRE+ V PGE+AL  YTAEN S
Sbjct:  641 KLWPQQREIYVLPGETALGFYTAENTS 667
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COX11_BOVIN (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Bos taurus GN=COX11 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.591e-19
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2 
Query:  434 QKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDG-----TVTTREVVVQFNADVADGIQWKFIP 682
            ++++ +L Y+ A    M+G++YAAVPLYR +CQ TG GG+          +A H+ D       V  R + + FNADV   +QW F P
Sbjct:   85 RRNKTVLTYMAAAAVGMLGASYAAVPLYRLYCQTTGLGGSA---------VAGHASDQIENMVPVKDRIIKITFNADVHASLQWNFRP 163

HSP 2 Score: 45.0542 bits (105), Expect = 1.591e-19
Identity = 20/43 (46.51%), Postives = 26/43 (60.47%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            + G+STYNV P +A  YFNK   F       +P+ + DMPVFF
Sbjct:  190 VIGISTYNVVPFEAGQYFNKIQCFCFEEQRLNPQEEVDMPVFF 232

HSP 3 Score: 29.261 bits (64), Expect = 1.591e-19
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1 
Query:  685 QREVRVKPGESALAXYTAENRSSTP 759
            Q E+ V PGE+ALA Y A+N +  P
Sbjct:  165 QTEIYVVPGETALAFYKAKNPTDKP 189
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COX11_HUMAN (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Homo sapiens GN=COX11 PE=1 SV=3)

HSP 1 Score: 63.5438 bits (153), Expect = 1.593e-19
Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = 2 
Query:  413 ASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDG-----TVTTREVVVQFNADVADGIQWKFIP 682
            A      ++++  L Y+ A+   M+G++YAAVPLYR +CQ TG GG+          +A H+ D       V  R + + FNADV   +QW F P
Sbjct:   83 AQEEERRRQNKTTLTYVAAVAVGMLGASYAAVPLYRLYCQTTGLGGSA---------VAGHASDKIENMVPVKDRIIKISFNADVHASLQWNFRP 168

HSP 2 Score: 44.669 bits (104), Expect = 1.593e-19
Identity = 19/43 (44.19%), Postives = 26/43 (60.47%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            + G+STYN+ P +A  YFNK   F       +P+ + DMPVFF
Sbjct:  195 VIGISTYNIVPFEAGQYFNKIQCFCFEEQRLNPQEEVDMPVFF 237

HSP 3 Score: 29.261 bits (64), Expect = 1.593e-19
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1 
Query:  685 QREVRVKPGESALAXYTAENRSSTP 759
            Q E+ V PGE+ALA Y A+N +  P
Sbjct:  170 QTEIYVVPGETALAFYRAKNPTDKP 194
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COX11_PONAB (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Pongo abelii GN=COX11 PE=3 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 2.752e-18
Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 2 
Query:  380 SNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDG-----TVTTREVVVQFNADVADGIQWKFIP 682
            SN F+  Q+         ++++  L Y+ A+   M+G++YAAVPLYR +CQ TG GG+          +A H+ D       V  R + + FNADV   +QW F P
Sbjct:   77 SNPFTRAQKE-----EWRRRNKTTLTYVAAVAVGMLGASYAAVPLYRLYCQTTGLGGSA---------VAGHASDKIENMVPVKDRIIKISFNADVHASLQWNFRP 168

HSP 2 Score: 40.0466 bits (92), Expect = 2.752e-18
Identity = 19/44 (43.18%), Postives = 26/44 (59.09%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNK-YNAFALRSSVFSPRAD-DMPVFF 884
            + G+STYN+ P +A  YFNK    F       +P+ + DMPVFF
Sbjct:  195 VIGISTYNIVPFEAGQYFNKIQQCFCFEEQRLNPQEEVDMPVFF 238

HSP 3 Score: 29.261 bits (64), Expect = 2.752e-18
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1 
Query:  685 QREVRVKPGESALAXYTAENRSSTP 759
            Q E+ V PGE+ALA Y A+N +  P
Sbjct:  170 QTEIYVVPGETALAFYRAKNPTDKP 194
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RHIME (Cytochrome c oxidase assembly protein ctaG OS=Rhizobium meliloti GN=ctaG PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.913e-18
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 2 
Query:  467 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTK 688
            A V  M+G  YAAVPLY  FC+ TGY GT QR E   +          +   ++ V F+A+VA G+ W+F+P +
Sbjct:   23 AFVAGMIGMAYAAVPLYDMFCRVTGYNGTTQRVEQASD---------LILDEKIKVTFDANVAAGLPWEFVPVQ 87

HSP 2 Score: 40.817 bits (94), Expect = 7.913e-18
Identity = 19/42 (45.24%), Postives = 24/42 (57.14%), Query Frame = 3 
Query:  762 TGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            TG +T+NVTPM A  YFNK   F    +   P  + +MPV F
Sbjct:  113 TGQATFNVTPMAAGAYFNKVQCFCFTETTLEPGEEMEMPVVF 154

HSP 3 Score: 28.1054 bits (61), Expect = 7.913e-18
Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 1 
Query:  664 PMEVYSNQREVRVKPGESALAXYTAENRSSTP 759
            P E    QR++ V+ GE+    Y A+N +STP
Sbjct:   80 PWEFVPVQRDIDVRIGETVQIMYRAKNLASTP 111
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COX11_DICDI (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Dictyostelium discoideum GN=cox11 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.975e-18
Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 2 
Query:  377 KSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTK 688
            K+N+ ++F+         ++K++ + LY+   +  ++G +YAAVPLYR FC+ATGYGGT +  +   + I + + D TV    + V F+A  A+ I W F PT+
Sbjct:  111 KNNNNNNFKEEQKK--ILQEKNKAIGLYVLIAIIGILGLSYAAVPLYRIFCRATGYGGTTRDADDF-DVIRKRNLDRTV--YPIKVTFSASTANKIPWTFKPTQ 209

HSP 2 Score: 41.9726 bits (97), Expect = 9.975e-18
Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = 3 
Query:  759 ITGVSTYNVTPMKAAVYFNKYNAFAL-RSSVFSPRADDMPVFFTL 890
            I GV+TYN+TPMKA  YF K   F      + +    DMPV F +
Sbjct:  234 IIGVATYNITPMKAGTYFTKIQCFCFDEQRINAHETIDMPVLFVI 278

HSP 3 Score: 24.6386 bits (52), Expect = 9.975e-18
Identity = 11/32 (34.38%), Postives = 13/32 (40.62%), Query Frame = 1 
Query:  664 PMEVYSNQREVRVKPGESALAXYTAENRSSTP 759
            P      Q  +   PGE  L  Y A N + TP
Sbjct:  202 PWTFKPTQSTIECLPGEPVLCFYRATNNTDTP 233
[Close]
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_SINMW (Cytochrome c oxidase assembly protein ctaG OS=Sinorhizobium medicae (strain WSM419) GN=ctaG PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.227e-17
Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 2 
Query:  467 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTK 688
            A V  MVG  YAAVPLY  FC+ TGY GT QR E          +   +   +V V F+A+VA G+ W+F P +
Sbjct:   23 AFVVGMVGMAYAAVPLYDMFCRVTGYNGTTQRVE---------QESDLILDEKVKVTFDANVAAGLPWEFAPVQ 87

HSP 2 Score: 40.817 bits (94), Expect = 2.227e-17
Identity = 19/42 (45.24%), Postives = 24/42 (57.14%), Query Frame = 3 
Query:  762 TGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884
            TG +T+NVTPM A  YFNK   F    +   P  + +MPV F
Sbjct:  113 TGQATFNVTPMAAGAYFNKVQCFCFTETTLQPGEEMEMPVVF 154

HSP 3 Score: 27.335 bits (59), Expect = 2.227e-17
Identity = 13/32 (40.62%), Postives = 18/32 (56.25%), Query Frame = 1 
Query:  664 PMEVYSNQREVRVKPGESALAXYTAENRSSTP 759
            P E    QR++ V+ GE+    Y A N +STP
Sbjct:   80 PWEFAPVQRDIDVRIGETVQITYRARNLASTP 111
The following BLAST results are available for this feature:
BLAST of EY649930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
COXZ_RECAM7.016e-2241.86Cytochrome c oxidase assembly protein ctaG OS=Recl... [more]
COX11_MOUSE9.190e-2134.62Cytochrome c oxidase assembly protein COX11, mitoc... [more]
CO111_SCHPO5.424e-2037.19Rsm22-cox11 tandem protein 1, mitochondrial OS=Sch... [more]
CO112_SCHPO9.108e-2037.19Rsm22-cox11 tandem protein 2, mitochondrial OS=Sch... [more]
COX11_BOVIN1.591e-1937.50Cytochrome c oxidase assembly protein COX11, mitoc... [more]
COX11_HUMAN1.593e-1935.79Cytochrome c oxidase assembly protein COX11, mitoc... [more]
COX11_PONAB2.752e-1834.91Cytochrome c oxidase assembly protein COX11, mitoc... [more]
COXZ_RHIME7.913e-1840.54Cytochrome c oxidase assembly protein ctaG OS=Rhiz... [more]
COX11_DICDI9.975e-1835.58Cytochrome c oxidase assembly protein COX11, mitoc... [more]
COXZ_SINMW2.227e-1743.24Cytochrome c oxidase assembly protein ctaG OS=Sino... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-B09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649930 ID=EY649930; Name=EY649930; organism=Citrus sinensis; type=EST; length=910bp
ACCTATTGGTNACGCCCCCAGTTCTCGGTCCGNATTCCCGCCTCGACCCC
GCGTCCGAGAAATTTGAGTCGCCGAGAGAAAAATGCGGCTGCTTCTGCAT
TTTTGCTGCTGACTTGTGGGTTAATTGTGACACCACTGCTTTCCTTTTAT
GTTTGGAAGGATGTCATTGTCAAGGCTTTCAAGTAGAACCCATATATTGC
CACTCCTACAACAGTCCATATGCGTAAAAGATGTTCTGTGGTCGAATTAT
AAGTATACCAGAGTTGATACTAGCTGCTATGCTAGTGTGTGGGGTTTAAT
GCCAAGGTGTGGATATGGCTCAAATATGACTAATGGGTATCGGAAACCTC
AGTCTTTTGGCTCTGGATGTCTTTGGAAATCCAATTCGTTTTCTAGCTTT
CAGCGTCATTATGCTTCTCATGCTTCAACAGAGCAGAAATCAAGAAAGAT
GCTTTTATACCTCACAGCATTGGTTTTTGCAATGGTTGGAAGTACTTATG
CCGCCGTACCTTTGTATAGGAGATTCTGCCAGGCTACTGGCTATGGTGGT
ACTGTTCAACGAAAAGAGACTGTTGAAGAAAAGATTGCTCGGCATTCCAA
AGATGGAACTGTCACTACAAGGGAAGTTGTTGTGCAATTCAACGCTGATG
TAGCTGATGGAATCCAATGGAAGTTTATTCCAACCAAAGAGAGGTAAGGG
TAAAGCCTGGAGAAAGCGCACTTGCATTNTACACTGCTGAGAATCGAAGT
TCGACTCCATAACTGGTGTCTCTACTTATAATGTCACCCCTATGAAGGCT
GCTGTCTACTTCAATAAATACAATGCTTTTGCTTTGAGGAGCAGCGTCTT
CTCCCCGAGAGCAGATGACATGCCTGTATTCTTTACATTGACCCTGAGTT
NGAACAATCC
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