EY649928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.715e-77 Identity = 133/180 (73.89%), Postives = 150/180 (83.33%), Query Frame = 2 Query: 113 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTSSPAPMLGTQVGF 652 QK+ S+ GATKASF A G+RSV+VSA AADP+RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAGIFIPE LTK+G+LNTPSWYTAGE EYFTDTTTLF++E++ IGWAEGRRWADIIKPGCVNTDPIFPN + GT VG+ Sbjct: 21 QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNK----LTGTDVGY 196 HSP 2 Score: 149.058 bits (375), Expect = 3.635e-35 Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 1 Query: 595 PDLPQHKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADP 825 P P +KLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMG WFQHIYTGTGPI +L AHLADP Sbjct: 182 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 6.743e-74 Identity = 129/180 (71.67%), Postives = 143/180 (79.44%), Query Frame = 2 Query: 113 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTSSPAPMLGTQVGF 652 +++ S+ G TKASF T RS + AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAGIFIPELLTK+GILNTPSWYTAGE EYFTDTTTLFIVE++ IGWAEGRRWADIIKPGCVNTDPIFPN + GT VG+ Sbjct: 21 RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNK----LTGTDVGY 196 HSP 2 Score: 149.058 bits (375), Expect = 3.635e-35 Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 1 Query: 595 PDLPQHKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADP 825 P P +KLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMG WFQHIYTGTGPI +L AHLADP Sbjct: 182 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 7.330e-40 Identity = 70/140 (50.00%), Postives = 86/140 (61.43%), Query Frame = 2 Query: 206 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWY-TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTSSP 622 R V+V A + W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG AG+ IPE+LTK G++N P W G+ YF ++T V M + E RRW DI PG VN DPIF + S P Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKSYSLP 158 HSP 2 Score: 53.5286 bits (127), Expect = 7.330e-40 Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 595 PDLPQHKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADP 825 P + L + GYPG + F+PL + +P + KE KE+ NGRLAMLA +G QH G GP +L HLADP Sbjct: 150 PIFKSYSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADP 219
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.744e-39 Identity = 69/172 (40.12%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 203 TRSVSVSAAAADP------NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTSSPAPMLGTQVGFG 655 +R V AAA P +RPLWF +LDGSLPGD+GFDPLGL SDPE RW E+++ R+AMLGA G PE L K+G++ +W+ AG Y+ D TLF++EM +G+AE RR+ D KPG + LG + GFG Sbjct: 35 SRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ----------YFLGLEKGFG 195 HSP 2 Score: 76.2554 bits (186), Expect = 2.744e-39 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP +L+ H+ADPV Sbjct: 202 YPGGPFFNPLGFGKDE-KSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPV 264
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.575e-39 Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 206 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPG 580 R+ S NR LWF +LDG LPGDFGFDPLGL SDPE +W E+++ R+AMLGAAG PE+L K G++ +W+ AG Y+ D TLF++EM +G+AE RR+ D KPG Sbjct: 40 RAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPG 178 HSP 2 Score: 78.1814 bits (191), Expect = 3.575e-39 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 628 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA++G + Q + TG GP +L+ HLADPV Sbjct: 197 DPAYPGGPLFNPLGFGKDE-KSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPV 262
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.199e-39 Identity = 73/128 (57.03%), Postives = 89/128 (69.53%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTSSPAPMLG 637 W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG AG+ +PE+ T +GI+N P WY AG+ EYF ++TLF++E I + E RRW DI PG VN DPIF S PA +G Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVG 183
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.496e-38 Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 2 Query: 209 SVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTSSPAPMLG 637 S S+ + + W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+ +PE+ TK+GI+N P WY AG+ +YF ++TLF++E I + E RRW DI PG VN DPIF S P +G Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVG 184
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.350e-31 Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 197 AGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 A T+ ++ SA+ + P+R L+ F G PP +L G PGD+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 44 ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 202 HSP 2 Score: 71.633 bits (174), Expect = 1.350e-31 Identity = 40/68 (58.82%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI +L HLADPV Sbjct: 194 TDPIYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.987e-31 Identity = 43/109 (39.45%), Postives = 55/109 (50.46%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSW--YTAGELEYFTDTT------TLFIVEMIFIGWAEGRR 556 W PG P +LDGS PGDFGFD LGLG P L +SE++HCRWAML GI +PE L + W G+ Y T+ +E + I + E +R Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157 HSP 2 Score: 73.1738 bits (178), Expect = 2.987e-31 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMG-CWFQHIYTGTGPIXHLIAHLADP 825 YPGG FDPLG+ S P K +EL+ KEIKNGRLA+LA++G C Q Y GTGP+ +L HLADP Sbjct: 168 YPGGA-FDPLGY-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADP 229
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.891e-31 Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA--GELEY------FTDTTTLFIVEMIFIGWAEGRR 556 WFPG P LDGS PGDFGFDPLGL + PE +SEI HCRWAML G+ +PE L + W G+ Y + + T+ +E + I +AE +R Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR 156 HSP 2 Score: 72.0182 bits (175), Expect = 3.891e-31 Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMG-CWFQHIYTGTGPIXHLIAHLADP 825 YPGG FDPLG+ S P K +EL+ KEIKNGRLAMLA +G C Q Y GTGP+ +L HLADP Sbjct: 167 YPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADP 228 The following BLAST results are available for this feature:
BLAST of EY649928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649928 ID=EY649928; Name=EY649928; organism=Citrus sinensis; type=EST; length=954bpback to top |