EY649920

Overview
NameEY649920
Unique NameEY649920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649920 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 8.226e-16
Identity = 39/101 (38.61%), Postives = 50/101 (49.50%), Query Frame = 2
Query:   53 MVRD*IWVPLRTLTLLFVPTLSGYVGDRT*DIS*KDVGQDGGAIVSVYITPWCGALHKASYNSMMNLVACFKKTKTALTGKAD*D*HKTSCSL*GVHGLPS 355
            M +  IW     L LL V  ++  V   T D   K+VG+D GA+V  Y  PWCG   K +      L A FKK K+ L  K D D  K+ C+  GV G P+
Sbjct:    1 MAKSQIWFGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFY-APWCGHCKKLA-PEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPT 99          

HSP 2 Score: 47.3654 bits (111), Expect = 8.226e-16
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 3
Query:  348 YPALTRNPNGPVEPNYHEGPRSAGALADIANNEGRTNVDIAPDP 479
            YP +   P G +EP  +EGPR+A ALA+  N EG TNV +A  P
Sbjct:   97 YPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTNVKLAAVP 140          
BLAST of EY649920 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 3.962e-15
Identity = 31/69 (44.93%), Postives = 38/69 (55.07%), Query Frame = 2
Query:  155 KDVGQDGGAIVSVYITPWCGALHKAS--YNSMMNLVACFKKTKTALTGKAD*D*HKTSCSL*GVHGLPS 355
            K+VG D GA+V  Y  PWCG   K +  Y  + N    FKK K+ L  K D D HK+ CS  GV G P+
Sbjct:   41 KEVGHDKGALVEFY-APWCGHCKKLAPEYEKLPN---SFKKAKSVLIAKVDCDEHKSVCSKYGVSGYPT 105          

HSP 2 Score: 50.0618 bits (118), Expect = 3.962e-15
Identity = 32/90 (35.56%), Postives = 39/90 (43.33%), Query Frame = 3
Query:  348 YPALTRNPNGPVEPNYHEGPRSAGALADIANNEGRTNVDIAPDPSR-------------WGGTKQL****NQS*QHCYEMDR*IAPWCGH 578
            YP +   P G +EP   EGPR+A +LA+  N EG TNV IA  PS                GTK +             +    APWCGH
Sbjct:  103 YPTIQWFPKGSLEPKKFEGPRTAESLAEFVNTEGGTNVKIATAPSHVVVLTPETFNEVVLDGTKDV-------------LVEFYAPWCGH 179          
The following BLAST results are available for this feature:
BLAST of EY649920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PDIA6_ARATH8.226e-1638.61Probable protein disulfide-isomerase A6 OS=Arabido... [more]
PDIA6_MEDSA3.962e-1544.93Probable protein disulfide-isomerase A6 OS=Medicag... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-A07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649920 ID=EY649920; Name=EY649920; organism=Citrus sinensis; type=EST; length=808bp
AAAAACCACCCTACCCGCCCAGGGGGGAACTAACGGATCAGACAGCACAT
AAATGGTGAGGGATTAAATCTGGGTACCTCTACGCACTCTAACCTTGCTC
TTCGTACCAACCCTCTCAGGCTATGTCGGGGACCGAACATAAGACATCTC
TTAAAAGGACGTCGGTCAAGACGGGGGAGCTATTGTCAGTGTTTACATCA
CTCCTTGGTGTGGCGCACTGCACAAAGCCAGCTACAACAGTATGATGAAC
CTCGTCGCATGCTTTAAGAAGACAAAAACCGCCTTGACCGGAAAGGCGGA
CTGAGACTAACATAAGACCTCATGCAGCCTATAGGGTGTTCATGGATTAC
CCAGCACTGACTAGGAATCCTAATGGGCCTGTGGAACCCAACTATCATGA
AGGGCCACGATCTGCTGGAGCCCTTGCTGATATTGCGAATAATGAAGGAA
GAACCAATGTGGATATAGCTCCCGACCCATCTCGATGGGGGGGTACTAAG
CAACTGTAGTGATGATGAAACCAGTCATGACAACACTGCTATGAGATGGA
TCGGTAAATTGCACCCTGGTGTGGGCATCGCATAACCTTGCTGCGTCATA
TGATAGGAGGCGCTCTCATTTACTTCTGGAGACTAGGNGGATAGTAGCTG
ATTAGGATGCTGACATATTCTCGATCTAGCTGTTAGTCTGTATTAGCAGC
ATGTCANGTAGATGTCTATGCAGTAGATGAANTGGGTATGATTTGGGTTG
CTGCACAGACNGGTACACTATGTGCTCTCTCTTGAAAATGGGGGCTCATC
TGATGCAA
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