EY649913

Overview
NameEY649913
Unique NameEY649913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6950 contig Csv1_Contig6950:1..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: PGDH_MACFA (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Macaca fascicularis GN=HPGD PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.131e-25
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKS---LTSYKRKGIRINVLCPEFVQT 815
            G   LVTG A GIGRA + +L  KG  V +VD++   G +  + +++   KF         +FI+CDVA+ +     F K V  +G LDI +N AG++N            ++W  TL +NL++VI  T   +  M  Q   + G+IINM S AGL P+   P+Y A K G+V FT+S     +    G+R+N +CP FV T
Sbjct:    5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDE---KFEPQ----KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT 188          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: PGDH_HUMAN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Homo sapiens GN=HPGD PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.292e-25
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKS---LTSYKRKGIRINVLCPEFVQT 815
            G   LVTG A GIGRA + +L  KG  V +VD++   G +  + +++              +FI+CDVA+ +     F K V  +G LDI +N AG++N            ++W  TL +NL++VI  T   +  M  Q   + G+IINM S AGL P+   P+Y A K G+V FT+S     +    G+R+N +CP FV T
Sbjct:    5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDE-------QFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT 188          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.292e-25
Identity = 72/204 (35.29%), Postives = 106/204 (51.96%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLTSYKR---KGIRINVLCPEFVQTEM 821
            G   LVTG A GIGRA +  L  KG  V +VD++   G +  + +++              +FI+CDVA+       F K V  +G LDI +N AG++N            ++W  TL +NL++VI  T   +  M  Q   + GVIINM S AGL P+   P+Y A K G++ FT+S    ++    G+R+N +CP FV T +
Sbjct:    5 GKVALVTGAAQGIGRAFAEGLLHKGAKVALVDWNLEAGVKCKAALDE-------EFEPQKTLFIQCDVADQEQLRDTFTKVVDYFGRLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICPGFVNTSI 190          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: PGDH_MOUSE (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mus musculus GN=Hpgd PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.251e-24
Identity = 69/202 (34.16%), Postives = 107/202 (52.97%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKS---LTSYKRKGIRINVLCPEFVQT 815
            G   LVTG A GIG+A + +L   G  V +VD++   G +  + +++              +F++CDVA+ +     F K V  +G LDI +N AG++N            ++W  TL +NL++VI  T   +  M  Q   + G+IINM S AGL P+   P+Y A K G++ FT+S     +  + G+R+NV+CP FV T
Sbjct:    5 GKVALVTGAAQGIGKAFAEALLLHGAKVALVDWNLEAGVKCKAALDE-------QFEPQKTLFVQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEQTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVDT 188          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: PGDH_RAT (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.134e-24
Identity = 69/202 (34.16%), Postives = 108/202 (53.47%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKS---LTSYKRKGIRINVLCPEFVQT 815
            G   LVTG A GIG+A + +L   G  V +VD++   G +  + +++              +FI+CDVA+ +     F K V  +G LDI +N AG++N            ++W  TL +NL++VI  T   +  M  Q   + G+IIN+ S AGL P+   P+Y A K G++ FT+S     +  + G+R+NV+CP FV+T
Sbjct:    5 GKVALVTGAAQGIGKAFTEALLLHGAKVALVDWNLETGVKCKAALDE-------QFEPQKTLFIQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGVNNE-----------KNWEQTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINISSIAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVKT 188          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.639e-24
Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKS---LTSYKRKGIRINVLCPEFVQT 815
            G   LVTG A GIGRA + +L  KG  V +VD++   G +  + +++              +FI+CDVA+       F K V  +G LDI +N AG++N            ++W  TL +NL++VI  T   +  M  Q   + G+ INM S AGL P+   P+Y A K G+V FT+S     +    G+R+N +CP FV T
Sbjct:    5 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVKCKAALDE-------QFEPQKTLFIQCDVADQEQLRDTFRKVVDHFGKLDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICPGFVDT 188          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.749e-18
Identity = 68/198 (34.34%), Postives = 99/198 (50.00%), Query Frame = 3
Query:  231 STLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEM 821
            + L+TGGASGIG A   +   +   V V D  E +G+  A + ++ N + H         F++ D+ +      A E  V T+GGLD+ IN AGI    P  + +      W   L VNL  +   ++ A+  M AA K G IIN  S  GL    + P Y+A KGGV+  TKS+   Y +  IR+N +CP  + T +
Sbjct:    7 TVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGE--AMVRKENNDRLH---------FVQTDITDEAACQHAVESAVHTFGGLDVLINNAGIEIVAPIHEMELS---DWNKVLQVNLTGMFLMSKHALKHMLAAGK-GNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPL 189          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.984e-18
Identity = 69/205 (33.66%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  237 LVTGGASGIGRALSLSLARKGVFVTV-VDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNP---IPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQTEMALKVG 836
            +VTG + GIG+A++LSL + G  V V    S  + +EV+  +E    +         A+    DV+   D  A  +  V  +G +DI +N AGI+     +   K Q      W+  +D+NL  V  CTQ A  IM   KK G IIN+ S  GL        YSA K GV+ FTK++   Y  + I +N + P F+ ++M  K+G
Sbjct:   81 IVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQ---------ALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGLLMRMKKSQ------WQEVIDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLG 269          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTE 818
            G   L+TG  SGIG+  ++  A +G  V + D SE KGKE   L++    +         A FI  DVA  +D     +K V T+G LDI +N AGI   +P+   +      +  T+ VN+      ++ A+  M+  +  GVI+N+ S AGL  +    +YS  K  ++  T+SL   Y   GIR+N +CP   Q+E
Sbjct:    5 GKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGE---------AAFIFGDVA--KDAEQIVKKTVETFGRLDILVNNAGI---VPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMK-KQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSE 188          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 66/205 (32.20%), Postives = 101/205 (49.27%), Query Frame = 3
Query:  237 LVTGGASGIGRALSLSLARKGVFVTV-VDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNP---IPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQTEMALKVG 836
            +VTG + GIG+A++LSL + G  V V    S  + +EV+  +E    +         A+    DV+   D  A  +  +  +G +D+ +N AGI+     I   K Q      W   +D+NL  V  CTQ A  IM   +K G IIN+ S  GL        Y+A K GV+ F+K+       + I +NV+CP F+ ++M  K+G
Sbjct:   76 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQ---------AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQ------WDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG 264          
The following BLAST results are available for this feature:
BLAST of EY649913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
PGDH_MACFA1.131e-2536.6315-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ma... [more]
PGDH_HUMAN3.292e-2535.6415-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ho... [more]
PGDH_CAVPO3.292e-2535.2915-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ca... [more]
PGDH_MOUSE1.251e-2434.1615-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mu... [more]
PGDH_RAT2.134e-2434.1615-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ra... [more]
PGDH_BOVIN3.639e-2435.1515-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bo... [more]
BACC_BACSU1.749e-1834.34Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
FABG_CUPLA2.984e-1833.663-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
Y325_THEMA8.683e-1833.17Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
FABG3_BRANA7.350e-1732.203-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649913 ID=EY649913; Name=EY649913; organism=Citrus sinensis; type=EST; length=937bp
CCAGTGCCGCGCAAATTGTGGTCCGGCGAGGAGAATGGGAAGCCGTCTTG
ATAACATCACCCCTTCATTTGGCAATTTATAGTAACAACAAATTTCAGTA
TGTTACAAATAAATACCCGGAAAAAGGGACAGTAAAAGCCCGCTCACATA
ATAAAACTCTTAACCGAGTAATTTAATCGCTTCCCTTTGACTCTCTGCCT
GTTCATAAAATGGAGCTCAAGCCGGGCTTATCAACTTTGGTCACCGGCGG
TGCATCTGGGATTGGTAGAGCTTTGAGTTTATCTCTTGCAAGGAAGGGAG
TCTTTGTGACAGTTGTTGATTTCTCTGAATAAAAGGGAAAGGAAGTTGCA
TCGCTTGTTGAAAAATAGAATGCCAAGTTTCATTCAAACTTAAGATTTCC
ATCTGCTATGTTTATAAGATGTGATGTGGCCAACACAAGAGATACAGCTG
CTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTATC
AACGGTGCTGGGATAAGTAATCCTATTCCATTCCCAAAGGATCAAACTGA
TGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGATTGCAGTTA
TTGATTGCACTCAGAAAGCTATTGGAATTATGCAAGCTGCAAAAAAGCCT
GGAGTGATTATAAATATGGGATCTTCTGCAGGTCTTTATCCAATGTACAA
TGATCCTATCTACTCTGCTTNCAAAGGTGGTGTTGTTTTATTTACTAAAT
CACTTACTTCCTACAAACGCAAGGGAATTCGCATCAATGTGCTGTGCCCT
GAGTTTGTTCAAACTGAGATGGCATTAAAGGTGGGCTTCAAATTATTGAT
CTGATGGGGGGCTTTTACCTATGGAAATGGAGTGAAAGGTGCTTTTGACT
TATACTGACGAGAGTAAGCTGATCTGCCTATGATACA
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