EY649909

Overview
NameEY649909
Unique NameEY649909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649909 vs. ExPASy Swiss-Prot
Match: NPR1_ARATH (Regulatory protein NPR1 OS=Arabidopsis thaliana GN=NPR1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22
Identity = 64/174 (36.78%), Postives = 102/174 (58.62%), Query Frame = 2 
Query:    2 IDVLEGEMRRNPMAGDAFITSHTLSDDLHMKLLYLENRVAFARLLFPTEAKLAMDIANTETTSEF--SGFCASKGSSGNLREVDLNETPVMRNKRLRPRMEALMKTVEMGQRYFPLCSEVLDKFME-DDLQDLFFLENGTKEEQRVKRMRFIELKDDVQKAFTRDKAEISRSGL 514
            +++LE E +R  +  D   +    +D+L M LL LENRVA A+ LFPTEA+ AM+IA  + T EF  +     + +        +   P    +  + R++AL KTVE+G+R+FP CS VLD+ M  +DL  L   E+ T E++  K+ R++E+++ ++KAF+ D  E+  S L
Sbjct:  395 VEILEQEDKREQIPRDVPPSFAVAADELKMTLLDLENRVALAQRLFPTEAQAAMEIAEMKGTCEFIVTSLEPDRLTGTKRTSPGVKIAPFRILEEHQSRLKALSKTVELGKRFFPRCSAVLDQIMNCEDLTQLACGEDDTAEKRLQKKQRYMEIQETLKKAFSEDNLELGNSSL 568
The following BLAST results are available for this feature:
BLAST of EY649909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NPR1_ARATH1.770e-2236.78Regulatory protein NPR1 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649909 ID=EY649909; Name=EY649909; organism=Citrus sinensis; type=EST; length=733bp
CATTGATGTTCTGGAGGGAGAAATGAGGAGGAATCCGATGGCTGGTGATG
CCTTTATCACCTCCCACACTTTATCTGATGATTTGCACATGAAGCTGCTG
TACCTAGAAAATAGAGTGGCATTTGCACGGTTACTCTTCCCTACTGAAGC
CAAGCTAGCAATGGACATTGCCAATACTGAGACAACATCTGAGTTTTCTG
GTTTCTGTGCATCAAAAGGTTCAAGTGGAAACTTAAGGGAGGTTGACTTA
AATGAGACACCTGTAATGCGGAACAAGAGACTTCGTCCTAGGATGGAAGC
CCTTATGAAAACAGTGGAGATGGGTCAGCGTTATTTTCCCCTTTGCTCAG
AAGTGTTGGATAAGTTCATGGAGGACGACCTTCAGGATTTGTTTTTCCTT
GAGAATGGCACCAAAGAAGAGCAGAGAGTAAAGAGAATGCGCTTCATTGA
GCTCAAAGATGATGTTCAGAAGGCATTTACAAGGGACAAAGCTGAGATTA
GCCGATCAGGGTTATGTTCCTCATCATCCTCATCATCATTTAAAGATGGT
GTGAAGTACAAGCTCGGAAAATTATGATGTAAAAATGTCGATAATAATAA
GTCTAGTAACAGAGTGACCCATTTTCTTTGCAATTNTATCCAGGACCAAA
CTCTCTCTGTATACTACCTGTATCACAAAATTAAGTCATTGAAAGGATCA
TCGTTTGATAGCTTAAAAAAAAAAAAAAAGGGC
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