EY649895

Overview
NameEY649895
Unique NameEY649895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 3.079e-107
Identity = 186/237 (78.48%), Postives = 214/237 (90.30%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T++YYSRKAS+WI EDSCPDYMLK+EECLK+E++RV+HYLHSSSEPKL+EKVQHELL V+A+QLLEKEHSGC ALL DDKV+DLSRM+RL+ KI RGL PV+NIFKQHVTAEG ALV+ AED A+N+ A   +   +QEQV +RKVIELHDKY+ YV +CFQNHTLFHK+LKEAFE+FCNK VAGSSSAELLATFCDNILKKGG  +LSDE+IE+TLEKVVKLLAYISDKDLFAEFY
Sbjct:  200 TSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQQAEDTATNQVA---NTASVQEQVLIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFY 433          

HSP 2 Score: 30.4166 bits (67), Expect = 3.079e-107
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 1
Query:  841 AXDDHERSILTKLKHSVVVS-SPQDGGMVTD 930
            A DDHERSILTKLK       + +  GMVTD
Sbjct:  447 ANDDHERSILTKLKQQCGGQFTSKMEGMVTD 477          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.353e-34
Identity = 83/238 (34.87%), Postives = 133/238 (55.88%), Query Frame = 2
Query:   89 RTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +T+++Y  ++   I   SCPDYM K E CLK E +RVSHYL SSSEPKL E  + +L+S +   L++ E+SG  ++L DDK+EDL RM+ LFS++  GL  + ++   +V   G  +V   E                +   + + +++L DKY   + +   N   F  S+++AFE F N       S E ++ F D  LKK G + +S+E ++  L+K++ L   I +KD+F ++Y
Sbjct:  207 KTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSYVKEIGRGIVMDEEKTK-------------ESGTYFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYFIN---LNPKSPEYISLFIDEKLKK-GLKGVSEEEVDIILDKILMLFRLIQEKDVFEKYY 427          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.591e-28
Identity = 79/243 (32.51%), Postives = 129/243 (53.09%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y+R+++ ++ ++   +YM KAE  L  E+ RV  YLH S++ +L  K +  L+  +    LE  H+    LL  DK EDL RM+ L S+I  GL  +  + + H+  +G A ++   +AA N             +++V+ V+++H KY A V   F N   F  +L +A   F N         + S S ELLA +CD++LKK  +    +  +E+TL +V+ +  YI DKD+F +FY
Sbjct:  240 TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNP-EEAELEDTLNQVMVVFKYIEDKDVFQKFY 466          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.591e-28
Identity = 79/243 (32.51%), Postives = 129/243 (53.09%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y+R+++ ++ ++   +YM KAE  L  E+ RV  YLH S++ +L  K +  L+  +    LE  H+    LL  DK EDL RM+ L S+I  GL  +  + + H+  +G A ++   +AA N             +++V+ V+++H KY A V   F N   F  +L +A   F N         + S S ELLA +CD++LKK  +    +  +E+TL +V+ +  YI DKD+F +FY
Sbjct:  240 TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNP-EEAELEDTLNQVMVVFKYIEDKDVFQKFY 466          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.591e-28
Identity = 79/243 (32.51%), Postives = 129/243 (53.09%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y+R+++ ++ ++   +YM KAE  L  E+ RV  YLH S++ +L  K +  L+  +    LE  H+    LL  DK EDL RM+ L S+I  GL  +  + + H+  +G A ++   +AA N             +++V+ V+++H KY A V   F N   F  +L +A   F N         + S S ELLA +CD++LKK  +    +  +E+TL +V+ +  YI DKD+F +FY
Sbjct:  240 TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNP-EEAELEDTLNQVMVVFKYIEDKDVFQKFY 466          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_CAEEL (Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.000e-28
Identity = 84/251 (33.47%), Postives = 141/251 (56.18%), Query Frame = 2
Query:   92 TAAYYSRKASNWILED-SCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQL--LEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEG-TALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAG---------SSSAELLATFCDNILKKGGERELSDES-IEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y+++A+N++    +  DYM+K E  L +E DR   YL+SS++  L    +  L+S   NQL  L++   G   LL+D + +DLSRMF+L  ++P GL  +    + H+  EG  AL ++A +AA++ K            ++V+ ++E+H++Y + VN  F+N   F +SL +A   F N              + SAELLA +CD +L+K    ++ DE+ +EE   K++ +  YI DKD+F++FY
Sbjct:  240 TRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLIS---NQLDFLQRHFGG---LLVDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDAK------------LYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSS--KMPDEAELEELQTKIMVVFKYIDDKDVFSKFY 470          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 78/243 (32.10%), Postives = 123/243 (50.62%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  YY+ +++ +I E+S  DYM K E  L  E  RV  YLH ++E +L+ K +  L+  +   +  +       LL  DK+ DL+RM+ L S+IPRGL P+    ++HV   G   ++     A+N   E +        V++  ++++  KY   V   F++ T F  SL +A   F N+        + S S ELLA F D +LKK       +  +E+ L  V+ +  YI DKD+F +FY
Sbjct:  231 TENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHVEVIWNE----FQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVG---LQAVSSIATNGVIEPK--------VYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNP-EESEMEQLLNDVMIVFKYIEDKDVFQDFY 457          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25
Identity = 67/237 (28.27%), Postives = 132/237 (55.70%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L + K EDL+ M++LFS++P GL  +      ++  +G ALV        +++ E ++ V      +++ +++L  ++  ++ + F N  LF +++   FE F N     S S E L+ F D+ LKK G + L+++ +E  L+K + L  ++ +KD+F  +Y
Sbjct:  213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYY 432          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25
Identity = 67/237 (28.27%), Postives = 132/237 (55.70%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L + K EDL+ M++LFS++P GL  +      ++  +G ALV        +++ E ++ V      +++ +++L  ++  ++ + F N  LF +++   FE F N     S S E L+ F D+ LKK G + L+++ +E  L+K + L  ++ +KD+F  +Y
Sbjct:  213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYY 432          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25
Identity = 67/237 (28.27%), Postives = 132/237 (55.70%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L + K EDL+ M++LFS++P GL  +      ++  +G ALV        +++ E ++ V      +++ +++L  ++  ++ + F N  LF +++   FE F N     S S E L+ F D+ LKK G + L+++ +E  L+K + L  ++ +KD+F  +Y
Sbjct:  213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYY 432          
The following BLAST results are available for this feature:
BLAST of EY649895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CUL1_ARATH3.079e-10778.48Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1[more]
CUL3_DICDI3.353e-3434.87Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 ... [more]
CUL1_PONAB3.591e-2832.51Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1[more]
CUL1_MOUSE3.591e-2832.51Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1[more]
CUL1_HUMAN3.591e-2832.51Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2[more]
CUL1_CAEEL8.000e-2833.47Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 S... [more]
CUL1_DICDI9.779e-2632.10Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 ... [more]
CUL3_XENTR3.716e-2528.27Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1[more]
CUL3B_XENLA3.716e-2528.27Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1[more]
CUL3A_XENLA3.716e-2528.27Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649895 ID=EY649895; Name=EY649895; organism=Citrus sinensis; type=EST; length=1010bp
CCTTCTGGTCCGCCTGCCAGTACTCGGTCCGNATTCCCGGGCCCGACCCC
GCGTCCGATGAAAATGATTTTGAAACTGCCATGCTTAAAGAACAGCTGCA
TATTATTCACGGAAAGCTTCAAACTGGATCTTAGAAGATTCCTGTCCAGA
CTATATGTTAAAGGCTGAGGAGTGTCTGAAAAGGGAGAAAGATAGGGTTT
CTCATTACTTGCATTCTAGTAGTGAGCCAAAGTTACTAGAGAAAGTTCAA
CATGAGTTATTGTCAGTATATGCAAATCAACTGCTTGAGAAAGAGCACTC
AGGATGCCATGCATTGCTCATAGACGACAAGGTGGAGGATTTGTCAAGAA
TGTTCAGGCTCTTTTCTAAAATACCCCGAGGCTTATATCCTGTTTCGAAC
ATCTTTAAGCAGCATGTTACTGCTGAAGGTACAGCCTTGGTGAAACTGGC
TGAAGATGCAGCAAGCAATAAGAAGGCAGAGAAAAGGGATGTGGTCGGCT
TACAGGAGCAGGTTTTTGTCAGGAAAGTGATTGAGTTGCATGACAAGTAC
TTAGCATATGTAAATGATTGTTTCCAGAACCACACTCTCTTCCATAAGTC
TCTTAAGGAGGCTTTTGAGGTCTTCTGCAACAAGGGTGTTGCTGGAAGCT
CAAGTGCGGAACTCCTGGCCACTTTCTGTGATAATATTCTTAAGAAAGGT
GGGGAGCGAGAACTTAGTGATGAAAGCATTGAAGAAACGCTTGAGAAGGT
GGTGAAGCTGCTTGCATATATTAGTGACAAAGACTTATTCGCTGAATTCT
ACAGGAAAAAACTTGCTCGGCGGCTTCTTTNNTGACAGACGCTNATGATG
ATCATGAGAGAAGTATTTTGACGAAGCTGAAGCACAGTGTGGTGGTCAGT
TCACCTCAAGATGGAGGAATGGTTACNGACTAACATTGCGAAGGAAAACA
AACCATTTCGAGGATTATCTTACAATACCCTATGCAATNCAGGATAGATT
GGCATTACTG
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