EY649858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS24_ARATH (40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 1.837e-95 Identity = 160/180 (88.89%), Postives = 171/180 (95.00%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 KWVPVTKLGRLV+EGKI +EQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD++GHVGLGVKCSKEVATAIRGAIILAKLSV+P+RRGYWGNKIG+PHTVPC VTGKCGSVTVRMVPAPRG+GIVAARV KKVLQFA IDDVFTSSRGSTKTLGN VK Sbjct: 44 KWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 223 HSP 2 Score: 43.5134 bits (101), Expect = 1.837e-95 Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+C TYGFLTP+ W ET F K P Q+ Sbjct: 223 KATFDCLQKTYGFLTPEFWKETRFSKSPYQE 253
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 1.293e-93 Identity = 161/180 (89.44%), Postives = 168/180 (93.33%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 KWVPVTKLGRLV G I+ +EQIYLHSLP+KEYQIID LIG LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPC VTGKCGSVTVRMVPAPRG+GIVAARV KKVLQFA IDDVFTSSRGSTKTLGN VK Sbjct: 53 KWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 232 HSP 2 Score: 42.3578 bits (98), Expect = 1.293e-93 Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+C TYGFLTP+ W ET F + P Q+ Sbjct: 232 KATFDCLQKTYGFLTPEFWKETRFSRSPYQE 262
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.293e-93 Identity = 161/180 (89.44%), Postives = 168/180 (93.33%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPC VTGKCGSVTVRMVPAPRG+GIVAARV KKVLQFA IDDVFTSSRGSTKTLGN VK Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231 HSP 2 Score: 42.3578 bits (98), Expect = 1.293e-93 Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+C TYGFLTP+ W ET F + P Q+ Sbjct: 231 KATFDCLQKTYGFLTPEFWKETRFSRSPYQE 261
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS21_ARATH (40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 1.293e-93 Identity = 161/180 (89.44%), Postives = 168/180 (93.33%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPC VTGKCGSVTVRMVPAPRG+GIVAARV KKVLQFA IDDVFTSSRGSTKTLGN VK Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231 HSP 2 Score: 42.3578 bits (98), Expect = 1.293e-93 Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+C TYGFLTP+ W ET F + P Q+ Sbjct: 231 KATFDCLQKTYGFLTPEFWKETRFSRSPYQE 261
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_URECA (40S ribosomal protein S2 OS=Urechis caupo GN=RPS2 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 1.561e-82 Identity = 139/180 (77.22%), Postives = 159/180 (88.33%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +WVPVTKLGRLV++ KI++LE+IYL SLPIKE++IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPC VTGKCGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 45 EWVPVTKLGRLVKDMKIKTLEEIYLFSLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAK 224 HSP 2 Score: 40.4318 bits (93), Expect = 1.561e-82 Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQDTQFF*RQSHLQGIIT 858 +AT+ TY +LTPD W ET F K P Q+ + + H +G +T Sbjct: 224 KATYAAIAATYSYLTPDLWRETVFTKSPYQEYTDYLAKHHGRGAVT 269
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_ICTPU (40S ribosomal protein S2 OS=Ictalurus punctatus GN=rps2 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.003e-81 Identity = 139/180 (77.22%), Postives = 159/180 (88.33%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +WVPVTKLGRLV++ KI+SLE+IYL+SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS+IPVRRGYWGNKIG+PHTVPC VTG+CGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 44 EWVPVTKLGRLVKDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 223 HSP 2 Score: 38.5058 bits (88), Expect = 1.003e-81 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+ TY +LTPD W ET F K P Q+ Sbjct: 223 KATFDAISKTYSYLTPDLWKETVFTKSPYQE 253
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_RAT (40S ribosomal protein S2 OS=Rattus norvegicus GN=Rps2 PE=1 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.785e-81 Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPC VTG+CGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238 HSP 2 Score: 38.5058 bits (88), Expect = 3.785e-81 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+ TY +LTPD W ET F K P Q+ Sbjct: 238 KATFDAISKTYSYLTPDLWKETVFTKSPYQE 268
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_MOUSE (40S ribosomal protein S2 OS=Mus musculus GN=Rps2 PE=1 SV=3) HSP 1 Score: 285.419 bits (729), Expect = 3.785e-81 Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPC VTG+CGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238 HSP 2 Score: 38.5058 bits (88), Expect = 3.785e-81 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+ TY +LTPD W ET F K P Q+ Sbjct: 238 KATFDAISKTYSYLTPDLWKETVFTKSPYQE 268
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_HUMAN (40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 6.440e-81 Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPC VTG+CGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238 HSP 2 Score: 38.5058 bits (88), Expect = 6.440e-81 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+ TY +LTPD W ET F K P Q+ Sbjct: 238 KATFDAISKTYSYLTPDLWKETVFTKSPYQE 268
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 6.440e-81 Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPC VTG+CGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 59 EWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238 HSP 2 Score: 38.5058 bits (88), Expect = 6.440e-81 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +ATF+ TY +LTPD W ET F K P Q+ Sbjct: 238 KATFDAISKTYSYLTPDLWKETVFTKSPYQE 268 The following BLAST results are available for this feature:
BLAST of EY649858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649858 ID=EY649858; Name=EY649858; organism=Citrus sinensis; type=EST; length=930bpback to top |