EY649836

Overview
NameEY649836
Unique NameEY649836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7143 contig Csv1_Contig7143:529..1403. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649836 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.603e-50
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 1
Query:  307 IWGIPLLADERSDVILLKFLRARDFKVKDAFTMLKNTIRWRKEFXXXXXXXXXXXXXXXXTVFMHGFDKEWHPVCYNVYGEFQIXELYQKTFSDEKK 597
            IWG+PLL D+R+DV+LLKFLRARDFK ++A++ML  T++WR +F                 VFM G DKE HPVCYNVYGEFQ  +LYQKTFSDE+K
Sbjct:  327 IWGVPLLKDDRTDVVLLKFLRARDFKPQEAYSMLNKTLQWRIDFNIEELLDENLGDDLDKVVFMQGQDKENHPVCYNVYGEFQNKDLYQKTFSDEEK 423          

HSP 2 Score: 95.9005 bits (237), Expect = 7.603e-50
Identity = 50/89 (56.18%), Postives = 60/89 (67.42%), Query Frame = 3
Query:  591 KEEQKFLEWRIQXLERSIMILXFRPGGISTIVQVNDLXNSPGPAXWGAKTATKQGL*XVQDNYPGFGAKQGCINGPWGDPAVNRMISPF 857
            ++ ++FL WRIQ LE+SI  L F  GG+STI QVNDL NSPGP     + ATKQ L  +QDNYP F +KQ  IN PW   A  R+ISPF
Sbjct:  422 EKRERFLRWRIQFLEKSIRNLDFVAGGVSTICQVNDLKNSPGPGKTELRLATKQALHLLQDNYPEFVSKQIFINVPWWYLAFYRIISPF 510          
BLAST of EY649836 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.703e-33
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 1
Query:  301 VYIWGIPLLAD---ERSDVILLKFLRARDFKVKDAFTMLKNTIRWRKEFXXXXXXXXXXXXXXXXTVFMHGFDKEWHPVCYNVYGEFQIXELYQKTFSDEKKSR 603
            + +WG+PLL     E +DVILLKFLRARDFKV +AF MLK T++WRK+                   +M+G D+E HPVCYNV+ E    ELYQ   S++ + +
Sbjct:  203 IELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILGEEFGEDLATAAYMNGVDRESHPVCYNVHSE----ELYQTIGSEKNREK 302          

HSP 2 Score: 70.8626 bits (172), Expect = 2.703e-33
Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 3
Query:  591 KEEQKFLEWRIQXLERSIMILXFRPGGISTIVQVNDLXNSPGPAXWGAKTATKQGL*XVQDNYPGFGAKQGCINGPWGDPAVNRMISPF 857
            K  +KFL WR Q +E+ I  L  +PGG+++++Q++DL N+PG +        K+ +  +QDNYP F ++   IN P+   A+  ++SPF
Sbjct:  298 KNREKFLRWRFQLMEKGIQKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFWFYAMRAVLSPF 386          
BLAST of EY649836 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 8.656e-33
Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = 1
Query:  301 VYIWGIPLLADERSDVILLKFLRARDFKVKDAFTMLKNTIRWRKEFXXXXXXXXXXXXXXXXTVFMHGFDKEWHPVCYNVYGEFQIXELYQKTFSDEKKSRN 606
            V IWGIPLL D+RSDV+LLKFLRAR+FKVKD+F MLKNTI+WRKEF                 VFMHG D+E HPVCYNVYGEFQ  ELY KTFSDE+K ++
Sbjct:  150 VKIWGIPLLEDDRSDVVLLKFLRAREFKVKDSFAMLKNTIKWRKEFKIDELVEEDLVDDLDKVVFMHGHDREGHPVCYNVYGEFQNKELYNKTFSDEEKRKH 251          

HSP 2 Score: 81.2629 bits (199), Expect = 8.140e-15
Identity = 48/98 (48.98%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  567 LSENVF*RKEEQK-FLEWRIQXLERSIMILXFRPGGISTIVQVNDLXNSPGPAXWGAKTATKQGL*XVQDNYPGFGAKQGCINGPWGDPAVNRMISPF 857
            L    F  +E++K FL  RIQ LERSI  L F  GG+STI QVND+ NSPG      ++ATKQ +  +QDNYP F  KQ  IN PW       +I PF
Sbjct:  238 LYNKTFSDEEKRKHFLRTRIQFLERSIRKLDFSSGGVSTIFQVNDMKNSPGLGKKELRSATKQAVELLQDNYPEFVFKQAFINVPWWYLVFYTVIGPF 335          
BLAST of EY649836 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.385e-22
Identity = 59/100 (59.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query:  301 VYIWGIPLLADERSDVILLKFLRARDFKVKDAFTMLKNTIRWRKE-FXXXXXXXXXXXXXXXXTVFMHGFDKEWHPVCYNVYGEFQIXELYQKTFSDEKK 597
            V IWGIPLL DERSDVILLKFLRARDFKVK+AFTMLKNT++WRKE                   VF HG DK+ H V Y+ YGEFQ  E+    FSD++K
Sbjct:  351 VSIWGIPLLEDERSDVILLKFLRARDFKVKEAFTMLKNTVQWRKENKIDDLVSEDLEGSEFEKLVFTHGVDKQGHVVIYSSYGEFQNKEI----FSDKEK 446          
BLAST of EY649836 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.363e-22
Identity = 70/166 (42.17%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  103 EVAEAAEDDGAKXXXXXXXXXXXXXXXXPQEQLPQSPEPKPEAKPAVTSENESKXXXXXXXXXXXXVYIWGIPLLADERSDVILLKFLRARDFKVKDAFTMLKNTIRWRKE-FXXXXXXXXXXXXXXXXTVFMHGFDKEWHPVCYNVYGEFQIXELYQKTFSDEKK 597
            E A +AE+DG K                 +E +     P+    P V    E+             V IWG+PLL DERSDVIL KFLRARDFKVK+A TMLKNT++WRKE                   VF HG DKE H V Y+ YGEFQ  EL    FSD++K
Sbjct:  191 EKASSAEEDGTKTVEAI------------EESIVSVSPPESAVAPVVV---ETVAVAEAEPVEPEEVSIWGVPLLQDERSDVILTKFLRARDFKVKEALTMLKNTVQWRKENKIDELVESGEEVSEFEKMVFAHGVDKEGHVVIYSSYGEFQNKEL----FSDKEK 337          
BLAST of EY649836 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  307 IWGIPLLA-DERSDVILLKFLRARDFKVKDAFTMLKNTIRWRKEF--XXXXXXXXXXXXXXXXTVFMHGFDKEWHPVCYNVYGEFQIXELYQKTFSDEKK 597
            +WG+ LL  D+++DVILLKFLRARDFKV D+  ML+  + WR+EF                    +M G+DKE HPVCYN YG F+  E+Y++ F DE+K
Sbjct:   69 MWGVSLLGGDDKADVILLKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDLEGKVAYMRGYDKEGHPVCYNAYGVFKEKEMYERVFGDEEK 168          

HSP 2 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = 3
Query:  546 GVSDXGALSENVF*RKEE-QKFLEWRIQXLERSIMILXFRPGGISTIVQVNDLXNSPGPAXWGAKTATKQGL*XVQDNYPGFGAKQGCINGPWGDPAVNRMISPF 857
            GV     + E VF  +E+  KFL WR+Q LER + +L F+PGG+++I+QV DL + P       + A+ Q L   QDNYP   A +  IN PW    +  M SPF
Sbjct:  151 GVFKEKEMYERVFGDEEKLNKFLRWRVQVLERGVKMLHFKPGGVNSIIQVTDLKDMPKRE---LRVASNQILSLFQDNYPELVATKIFINVPWYFSVIYSMFSPF 252          
The following BLAST results are available for this feature:
BLAST of EY649836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PATL5_ARATH7.603e-5058.76Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 S... [more]
PATL4_ARATH2.703e-3345.19Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 S... [more]
PATL3_ARATH8.656e-3365.69Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 S... [more]
PATL2_ARATH1.385e-2259.00Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 S... [more]
PATL1_ARATH2.363e-2242.17Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 S... [more]
PATL6_ARATH1.098e-1947.00Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 S... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-B02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649836 ID=EY649836; Name=EY649836; organism=Citrus sinensis; type=EST; length=875bp
GAGGAGAATCCAGAGCAACCTTCGGAACCAACAAAGCCAGAACCAGAAAT
TGCTGCTCAAGAAGAAAAGGAAACTGAGGTTATTGAAGAAAAGACAGCTC
CAGAAGTTGCTGAAGCTGCAGAAGATGATGGTGCCAAAACTGTAGAGGCC
ATAGAAGAGACAGTTGTAGCCGTATCATCTTCTGTTCCACAAGAGCAATT
GCCTCAATCTCCAGAGCCAAAGCCTGAGGCAAAGCCTGCTGTCACTTCAG
AAAATGAGTCAAAAGGCACGACGACTGAACCCGAAATGGGGCCTGAAGAG
GTTTACATATGGGGCATTCCTCTCCTGGCTGATGAGAGAAGCGATGTCAT
TCTCTTGAAGTTCCTCCGCGCCAGAGACTTCAAGGTCAAAGATGCATTCA
CAATGCTCAAGAACACAATTCGATGGAGAAAGGAATTCGGCATTGATGAT
TTGATTGGGCAAGACTTGGGTGACGATTTGGACATAACGGTGTTCATGCA
CGGATTTGACAAAGAATGGCACCCTGTTTGCTACAATGTGTACGGGGAGT
TTCAGATCANGGAGCTTTATCAGAAAACGTTTTCTGACGAAAAGAAGAGC
AGAAATTCCTGGAGTGGCGAATTCAATTNCTGGAAAGGAGCATCATGATA
TTANATTTCAGGCCCGGTGGTATTTCTACTATTGTCCAGGTCAATGACTT
GAANAATTCTCCAGGACCTGCNTANTGGGGAGCTAAAACAGCTACCAAAC
AGGGCCTTTAGNTGGTCCAGGACAATTACCCTGGATTTGGTGCTAAACAG
GGGTGTATCAATGGACCATGGGGGGACCCGGCCGTTAACAGGATGATAAG
CCCATTTTGACTAAAAAACTAAAAA
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