EY649809

Overview
NameEY649809
Unique NameEY649809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649809_ssr36 microsatellite EY649809_ssr36:36..45. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.644e-21
Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  172 RDPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTDGCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            +DPP +P+ +A +L +WSFYRALIAEFI             I Y +QTDP  N D C G  +L I+    GMIF+L +CT GI  GHINP  TFGL  ARKV
Sbjct:   18 QDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKV 119          

HSP 2 Score: 22.3274 bits (46), Expect = 3.644e-21
Identity = 13/31 (41.94%), Postives = 15/31 (48.39%), Query Frame = 2
Query:  488 RTAMYMVKQSLCAIFGDG*VND*HKYCYTKY 580
            R  MYMV Q L AI G   V       +T+Y
Sbjct:  123 RAVMYMVAQCLGAICGVALVKAFQSAYFTRY 153          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.181e-19
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  154 FMTLTTRDPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTD--GCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            +M     DPP  P+++A +LT+WS YRA+IAEF+             I Y +Q+DP  N     C+G  IL I+    GMIF+L +CT G+  GHINP  TFGLF ARKV
Sbjct:   16 YMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKV 125          

HSP 2 Score: 23.8682 bits (50), Expect = 3.181e-19
Identity = 13/31 (41.94%), Postives = 16/31 (51.61%), Query Frame = 2
Query:  488 RTAMYMVKQSLCAIFGDG*VND*HKYCYTKY 580
            R  +Y+V QSL AI G G V       Y +Y
Sbjct:  129 RAVLYIVAQSLGAICGVGLVKGFQSAFYVRY 159          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.811e-18
Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  175 DPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTD--GCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            DPP  P+++  +LT+WS YRA+IAEFI             I Y +Q+D T NT    C+G  IL I+    GMIF+L +CT GI  GHINP  TFGLF ARKV
Sbjct:   22 DPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 124          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.822e-17
Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  175 DPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTD--GCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            DPP  P+++A +LT+WS YRA+IAEFI             I Y +QTD + +     C G  IL I+    GMIF+L +CT GI  GHINP  TFGLF ARKV
Sbjct:   22 DPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 124          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.822e-17
Identity = 50/108 (46.30%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  154 FMTLTTRDPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTDGCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            F T    DPP  P  +A +LT+WS YRA+IAEF+             I Y  Q+D       C G  IL I+    GMIF+L +CT GI  GHINP  TFGLF ARKV
Sbjct:   11 FQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 118          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.380e-17
Identity = 50/108 (46.30%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  154 FMTLTTRDPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTDGCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            F T    DPP  P  +A +LT+WS YRA+IAEF+             I Y  Q+D       C G  IL I+    GMIF+L +CT GI  GHINP  TFGLF ARKV
Sbjct:   11 FQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 118          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.380e-17
Identity = 49/108 (45.37%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  154 FMTLTTRDPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTDGCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            F T   +DPP  P ++  +L +WSFYRA+IAEF+             I Y  Q+D       C G  IL I+    GMIF+L +CT GI  GHINP  TFGLF ARKV
Sbjct:   13 FQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 120          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.060e-17
Identity = 50/103 (48.54%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  175 DPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTD--GCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            DPP  P+++A +LT+WS YRA+IAEFI             I Y +QTD   +     C G  IL I+    GMIF+L +CT GI  GHINP  TFGLF ARKV
Sbjct:   23 DPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 125          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.069e-17
Identity = 46/102 (45.10%), Postives = 55/102 (53.92%), Query Frame = 1
Query:  172 RDPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTDGCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            +DPP  P  +  +L +W  YRA+IAEF+             I Y  QTD T     C G  IL I+    GMIF+L +CT GI  GHINP  T GLF ARKV
Sbjct:   19 KDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKV 120          

HSP 2 Score: 25.409 bits (54), Expect = 6.069e-17
Identity = 14/31 (45.16%), Postives = 17/31 (54.84%), Query Frame = 2
Query:  488 RTAMYMVKQSLCAIFGDG*VND*HKYCYTKY 580
            RT +Y+V Q L AI G G V       YT+Y
Sbjct:  124 RTVLYIVAQCLGAICGCGFVKAFQSSYYTRY 154          
BLAST of EY649809 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.044e-17
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  175 DPPTDPVLNAMDLTEWSFYRALIAEFIXXXXXXXXXXXXDIDYNNQTDPTNNTD--GCAGACILRIS*DLCGMIFMLDHCTYGILCGHINPRTTFGLFSARKV 477
            DPP  P+++A +LT+WS YRA+IAEF+             I Y +QTD   +     C G  +L I+    GMIF+L +CT G+  GHINP  TFGLF ARKV
Sbjct:   18 DPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKV 120          
The following BLAST results are available for this feature:
BLAST of EY649809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
PIP25_ARATH3.644e-2150.98Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP23_ORYSJ3.181e-1945.45Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP22_ORYSJ2.811e-1849.51Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP24_MAIZE1.822e-1748.54Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_ARATH1.822e-1746.30Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_ARATH2.380e-1746.30Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_ARATH2.380e-1745.37Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP23_MAIZE4.060e-1748.54Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_ARATH6.069e-1745.10Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_MAIZE9.044e-1745.63Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-G06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649809 ID=EY649809; Name=EY649809; organism=Citrus sinensis; type=EST; length=896bp
AAAAAAATTAATATCTAATTAAAAACGAAAAGGCTTCTCTCTCTCTGTGC
TTGCGGGTAAATCAGAGCTCTGACGTGACTCTGTTTCTCTCCAAATCATT
GATGCTGCTTTTCCAATGGCTAATGACACTGAGGTGGCAGAGCACGGCTC
ATATTCATGACACTGACTACACGGGACCCACCAACGGATCCGGTATTAAA
CGCCATGGACCTGACCGAATGGTCATTCTACAGAGCCTTGATAGCTGAGT
TCATAACAACCCTGCTATTTCTTTACCTCACTGTCTTGACTGACATAGAC
TACAATAACCAGACCGATCCCACCAATAACACCGACGGTTGCGCCGGTGC
TTGCATCCTAAGAATTTCCTGAGACTTGTGCGGCATGATCTTTATGCTAG
ATCACTGCACCTACGGTATCTTATGTGGCCACATAAACCCAAGGACGACG
TTCGGACTATTCTCAGCCCGCAAAGTGATGCATACACCGTACTGCTATGT
ACATGGTGAAGCAAAGCCTATGCGCTATCTTCGGAGATGGATAGGTCAAT
GACTGACATAAATATTGCTACACAAAGTACNNGACGAGGAGCATACGAGC
TGGCCTATAGGTGCAAATCCTGATGACAATATGCCGACGATATCATAATG
GCCTATAGCNATGGGTACACAGCCTTGTATGCCAATGATCCCAGAGCAGC
GCATGATACTGCACGCTNCCGTACCTGTACCGCTCACCATAGATACACTA
CGTCATAGGCACTCGTCATATCACATGACCTGCATTGTCTGTATCATCAT
GAGTGCAGCGTCTCATTTTCATCACACGACACGCTGCGATATCATGGCAC
TAACGGATGACCTTACAGTCAGCAGTGAGGTCAATCACCATCATGT
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