EY649802

Overview
NameEY649802
Unique NameEY649802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY649802 vs. ExPASy Swiss-Prot
Match: ALB32_ARATH (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=ALB3L2 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.528e-47
Identity = 85/168 (50.60%), Postives = 116/168 (69.05%), Query Frame = 2 
Query:  293 ESIAGEESSLPVRALISFLDTYHDFTGFPWWTIIVSSTVALRIALLPLIVLQLKKIQRIAEXXXXXXXXXXXXXSEKRFVDQISLFRREKRAAGCPSLLWFIASFAIQVPCFLVGVTSIRRMSLDGHPGFDCGGIWWFQNLTEYPHGVLGSIFXVXMGRLHYTNVQLS 796
            E I  ++SSLPV A++ FL+ +H+FTG PWW II SSTVA+R+ALLPL++LQLKK++ I+E             + K  +DQ S F +E RA GCPS LWF    ++Q+PCF + + SIR+MSLDGHPGFD GG+ WFQNL++ P G  G +F + +   HY N+Q+S
Sbjct:   69 EIIPTDDSSLPVLAVVDFLEGFHEFTGLPWWMIIASSTVAVRLALLPLLILQLKKLKTISELLPKLPMPIPETPTLKGSIDQFSHFLKESRAIGCPSFLWFFPYLSVQLPCFFLLMASIRKMSLDGHPGFDSGGVLWFQNLSDLPGGSFGPVFPILIATFHYINIQIS 236
The following BLAST results are available for this feature:
BLAST of EY649802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ALB32_ARATH6.528e-4750.60ALBINO3-like protein 2, chloroplastic OS=Arabidops... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-F09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649802 ID=EY649802; Name=EY649802; organism=Citrus sinensis; type=EST; length=905bp
CCCACGCGTCCGGTTAATGGCAACCGCGAAGCTCTTACTCTTGCAACTCC
GCCGCTGTAGCTACTACTCTCATCCTCTGTCACGCGCGCCGCTCTGTCAC
CTGTTCAACGCGCCAATACCAACACTAACACAAACACAAACACCTCAACG
TGCTTTCTATTTCCGACCGCACGTTCATCTCTATCACTCAGGTTCAGCTG
ACGACTCAAGCGTCGGCGGAGACGGCGTCGGCGACCGCTACTCAGAAGTA
CCGATACCTGTCGAGACTGTCAATTTGAGTGAGAGAGTGATTGAAAGTAT
CGCCGGTGAAGAGTCGAGTCTTCCTGTTCGTGCGCTTATTTCGTTCCTTG
ATACTTACCATGATTTCACTGGCTTCCCTTGGTGGACAATTATAGTTTCG
TCAACCGTAGCGCTCAGAATTGCGCTGCTTCCTCTGATTGTTTTGCAACT
TAAGAAGATACAAAGGATTGCAGAGTTATTGCCTAGATTGCCGCCTCCAT
TTCCTCCACCTCTGTCAGAAAAGAGGTTTGTTGACCAAATATCACTTTTT
CGGAGGGAAAAAAGAGCAGCTGGTTGCCCCTCATTGCTATGGTTCATTGC
ATCCTTTGCCATCCAGGTCCCATGCTTTCTCGTAGGAGTGACCAGCATTC
GGAGAATGTCATTGGATGGTCATCCAGGGTTTGATTGTGGTGGGATTTGG
TGGTTCCAAAATTTGACCGAATATCCTCATGGTGTTTTAGGCTCCATCTT
TNCAGTGNTGATGGGCCGTCTGCACTACACTAATGTTCAGCTTTCTTTGG
GGCATNCTCTCTGGAAAAGAAAATGGGTCTGCTGGGCTAGGNCTAATATT
ACAAGTCGTATTTAATCTATGACGCTGCTCTTTTTTTTTGGGCTATATAT
TCTCA
back to top