EY649799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649799 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 6.500e-77 Identity = 148/218 (67.89%), Postives = 173/218 (79.36%), Query Frame = 3 Query: 42 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQ---KFRVSAAKTSPKLTNRNLRVXXXXXXXXXXXXXETLAQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAENNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVXEKRTLDVDAVIGADGANXQSAK 686 MAS+ALK+FTGLRQS E + ++++LP Q + R++A+K+SP++ RNLRV ETLA+ G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA GASV+NGLF+KMD+P+ PYVL+YT YD G EKRTL+VDAVIGADGAN + AK Sbjct: 1 MASIALKTFTGLRQSSPEN-NSITLSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAK 217
BLAST of EY649799 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.601e-75 Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 3 Query: 48 SMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVXXXXXXXXXXXXXETLAQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAENNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVXEKRTLDVDAVIGADGANXQSAK 686 ++ LKSFTGLRQS EQ + F++ +LP R+ RV+AA+ +PKL+NR LRV ETLAQ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKMKMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAE +GA+VINGLF+KMD P N++ PY L+YTEYDG G K+T++VDAVIGADGAN + AK Sbjct: 4 TVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRTSLRVTAARATPKLSNRKLRVAVIGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAK 220
BLAST of EY649799 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.362e-58 Identity = 117/187 (62.57%), Postives = 135/187 (72.19%), Query Frame = 3 Query: 132 RQQKFRVSAAKTSPKL-TNRNLRVXXXXXXXXXXXXXETLAQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAENNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-XEKRTLDVDAVIGADGANXQSAK 686 R + AA +SPKL + R LRV E LA+ GVET LIERKLDNCKPCGGAIPLCMV EFDLPLD++DRKV KMKMISPSNVAVDIG TL PHEYIGMVRREVLDAYLR RAE GA V+NGLF++ + P+ YV++Y YD + G EKRT +VDA++GADGAN + AK Sbjct: 30 RMARLVTRAAASSPKLPSGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKLDNCKPCGGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYLRSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADGANSRVAK 216
BLAST of EY649799 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.196e-46 Identity = 94/149 (63.09%), Postives = 109/149 (73.15%), Query Frame = 3 Query: 240 ETLAQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAENNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVXEKRTLDVDAVIGADGANXQSAK 686 E L + G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD +LRERAE G VING K+D+P PY L+Y ++ G E + L VD VIGADGAN + AK Sbjct: 19 EILVKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDRRVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFLRERAEKLGTKVINGTVYKLDIPSKDSDPYTLHYADH-SVGGTTGEMKILKVDVVIGADGANSRIAK 166
BLAST of EY649799 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14 Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 246 LAQNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAENNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVXEKRTLDVDAVIGADGANXQ 677 +A+ G++ L++R KPCGGAIP ++ +FD+P ++ K+T +MISP+ VDI P E ++GMV RE D +LRERA GA + G +++++ R+ + V++ + G E+ + VIGADGAN Q Sbjct: 21 MARAGLKVALLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAKITSARMISPTGRFVDI-----PIENGFVGMVDREDYDEWLRERAGKAGAERLTGTWLRIE--RDSGKTVVVWRDKVTG------EEMKAETRVVIGADGANSQ 152 The following BLAST results are available for this feature:
BLAST of EY649799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649799 ID=EY649799; Name=EY649799; organism=Citrus sinensis; type=EST; length=687bpback to top |