EY649795

Overview
NameEY649795
Unique NameEY649795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649795 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.189e-22
Identity = 50/62 (80.65%), Postives = 60/62 (96.77%), Query Frame = 2 
Query:    2 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 187
            AN+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LGAD+I++VSTN+Q
Sbjct:  179 ANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQ 240

HSP 2 Score: 62.7734 bits (151), Expect = 3.353e-21
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  520 LQDIAEDVEKIQKAMGTGIDVSFDCACFNHIMSTALSATRAXGKVASWG 666
            +QD+ E+V KIQ  M TG+DVSFDC  FN  MSTAL+ATRA GKV   G
Sbjct:  239 IQDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVG 287

HSP 3 Score: 60.4622 bits (145), Expect = 3.353e-21
Identity = 39/74 (52.70%), Postives = 44/74 (59.46%), Query Frame = 3 
Query:  654 CLVGMGHLEMTVPLTXAAAGEVMCGGWFRFMNNWPLGLGILKIGRLM*SPLYA-*VGFSQKDWERR-*TVARGG 869
            CLVG+   EMTVPLT AAA EV   G FR+ N WPL L  L+ G++   PL      FSQKD E    T ARGG
Sbjct:  284 CLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGG 357
The following BLAST results are available for this feature:
BLAST of EY649795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IDND_VITVI1.189e-2280.65L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-F02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649795 ID=EY649795; Name=EY649795; organism=Citrus sinensis; type=EST; length=944bp
TGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCA
TAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATT
GTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGG
TGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGTATATTACTGCC
CATTGCCCATCAGAAGAGTTTAGAAAAGTAAAAGACATCTCAAAATCTTC
ATGCTCGCAATCCTTCCCTTTCTCTTAATCATCATAACAACATGTTCTGT
TCAACCAACTCTGTTGCATTAAGACCTTGTTCCAACTTCCTCAGTTCTTT
TTTGTTCTCAGTACCTTTTTGTTCTCTGTTTGAAAGTTGACCACTCTAAT
CTGCATTATTCTTGTTATCAGAGTAGAGGTGAGCTTGAGCTTTGGTTCGT
TTGAAAATTGTTCATGTGCTCCTCACGCTTGTTTTTTCTGCTTGAATAAA
CCGCTATGAGTTGAGTATTTTGCAGGACATAGCTGAAGATGTGGAAAAGA
TACAGAAAGCCATGGGGACAGGAATAGATGTGAGCTTTGATTGTGCATGC
TTTAATCATATCATGTCAACAGCACTGAGTGCTACTCGTGCANGTGGTAA
AGTTGCCTCGTGGGGATGGGTCATCTNGAAATGACTGTGCCACTCACTNC
NGCTGCTGCAGGGGAGGTGATGTGTGGGGGGTGGTTTCGTTTCATGAACA
ACTGGCCACTGGGTCTGGGAATTCTTAAAATCGGAAGATTGATGTAAAGC
CCCTTATACGCATAGGTTGGTTTCTCCCAAAAGGATTGGGAAAGGCGTTG
AACAGTGGCCCGGGGGGGACTGCAATCAAGGCATGTTAATCTGTAAATAC
ACCCAAAAGAACCTTGGGCCAAATGAATAAATGGGATTGGCCGC
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