EY649794

Overview
NameEY649794
Unique NameEY649794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.486e-46
Identity = 98/167 (58.68%), Postives = 113/167 (67.66%), Query Frame = 1
Query:  352 INTIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMGSKLVFMCHHFAMPXMLS*NGSL 852
            I ++ S  +A VYKT SG C+AFLAN+ T SD TV FNG SY LPAWSVSILPDCKNV FNTAKINS T   +F+RQSL+    SS  +GS WSYI EP+GIS+ DAF KPGL EQI TTAD+SDYLW +L T+IK    +L  GSK V              NG L
Sbjct:  358 ITSLGSNLEAAVYKTESGSCAAFLANVDTKSDATVTFNGKSYNLPAWSVSILPDCKNVAFNTAKINSATESTAFARQSLKPDGGSSAELGSQWSYIKEPIGISKADAFLKPGLLEQINTTADKSDYLWYSLRTDIKGDETFLDEGSKAVLHIESLGQVVYAFINGKL 524          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL6_ORYSJ (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.162e-32
Identity = 81/165 (49.09%), Postives = 103/165 (62.42%), Query Frame = 1
Query:  376 QATVYKTG-SGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSR--QSLQVAADS---SDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMGSKLVFMCHHFAMPXMLS*NGSL 852
            +ATVY+T  + +C+AFLAN+   SD TVKFNGN+Y LPAWSVSILPDCKNVV NTA+INS            S+Q   DS    +   + WSY  EPVGI++++A TKPGL EQI TTAD SD+LW + S  +K    YL  GS+   + +       +  NG L
Sbjct:  367 EATVYQTADNSICAAFLANVDAQSDKTVKFNGNTYKLPAWSVSILPDCKNVVLNTAQINSQVTTSEMRSLGSSIQDTDDSLITPELATAGWSYAIEPVGITKENALTKPGLMEQINTTADASDFLWYSTSIVVKGDEPYLN-GSQSNLLVNSLGHVLQIYINGKL 530          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSJ (Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.696e-24
Identity = 59/135 (43.70%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  352 INTIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNI 756
            I +I S+ +A V+K  +G C+AFL+N   N+ V V+FNG  Y LPAWS+SILPDCK  VFNTA +   TL+P             +  +   W   +E      D AFTK GL EQ+  T D+SDYLW     NI
Sbjct:  364 IESIGSYEKAYVFKAKNGACAAFLSNYHMNTAVKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKM-----------NPVVRFAWQSYSEDTNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNI 487          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSI (Beta-galactosidase 4 OS=Oryza sativa subsp. indica GN=OsI_006270 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.696e-24
Identity = 59/135 (43.70%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  352 INTIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNI 756
            I +I S+ +A V+K  +G C+AFL+N   N+ V V+FNG  Y LPAWS+SILPDCK  VFNTA +   TL+P             +  +   W   +E      D AFTK GL EQ+  T D+SDYLW     NI
Sbjct:  364 IESIGSYEKAYVFKAKNGACAAFLSNYHMNTAVKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKM-----------NPVVRFAWQSYSEDTNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNI 487          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL9_ARATH (Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BGAL9 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.129e-23
Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  391 KTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLV-------PSFSRQSL---QVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLW 735
            +TG  +C+AFLANI  +    VKFNG SY LP WSVSILPDC++V FNTAK+ + T V       PS    S+    V  D+   I   W  + EP+GI  ++ FT  GL E +  T D+SDYLW
Sbjct:  382 ETGGKVCAAFLANIDEHKSAHVKFNGQSYTLPPWSVSILPDCRHVAFNTAKVGAQTSVKTVESARPSLGSMSILQKVVRQDNVSYISKSWMALKEPIGIWGENNFTFQGLLEHLNVTKDRSDYLW 506          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL_SOLLC (Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.518e-22
Identity = 58/146 (39.73%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  352 INTIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMGS 789
            + ++ ++ +A V+K+ SG C+AFLAN   +S   V F    Y LP WS+SILPDCKN V+NTA++ +         QS Q+   +  + G  W   NE     +DD FT  GL EQI  T D SDYLW      I P   +L  G+
Sbjct:  350 VTSLGNYQEARVFKSESGACAAFLANYNQHSFAKVAFGNMHYNLPPWSISILPDCKNTVYNTARVGA---------QSAQMKM-TPVSRGFSWESFNEDAASHEDDTFTVVGLLEQINITRDVSDYLWYMTDIEIDPTEGFLNSGN 485          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL5_ORYSJ (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.900e-22
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  352 INTIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPV-GISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMGSKL 795
            + T+ S  +A V+++ SG C+AFLAN  +NS   V FN  +Y LP WS+SILPDCKNVVFNTA +   T         +Q+ AD + ++   W   +E V  ++     T  GL EQ+  T D SDYLW   S  + P  ++L+ G+ L
Sbjct:  353 VTTLGSMQEAHVFRSSSG-CAAFLANYNSNSYAKVIFNNENYSLPPWSISILPDCKNVVFNTATVGVQT-------NQMQMWADGASSM--MWEKYDEEVDSLAAAPLLTSTGLLEQLNVTRDTSDYLWYITSVEVDPSEKFLQGGTPL 491          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL1_ARATH (Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.900e-22
Identity = 58/140 (41.43%), Postives = 73/140 (52.14%), Query Frame = 1
Query:  367 SFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMG 786
            ++ +A VYK+ SG CSAFLAN    S   V F  N Y LP WS+SILPDCKN V+NTA++ + T      R  +          G  W   NE      D++FT  GL EQI TT D SDYLW      +     +L+ G
Sbjct:  365 NYQEAHVYKSKSGACSAFLANYNPKSYAKVSFGNNHYNLPPWSISILPDCKNTVYNTARVGAQTSRMKMVRVPVHG--------GLSWQAYNEDPSTYIDESFTMVGLVEQINTTRDTSDYLWYMTDVKVDANEGFLRNG 496          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGAL9_ORYSJ (Beta-galactosidase 9 OS=Oryza sativa subsp. japonica GN=Os06g0573600 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.314e-21
Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  352 INTIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMG 786
            +  I ++ +A V+++ SG C+AFL+N  T++   V FNG  Y LPAWS+S+LPDC+  V+NTA + + +             A  + A G  W    E      + AFTK GL EQ+  T D+SDYLW     NI    ++LK G
Sbjct:  348 VQNIGNYEKAYVFRSSSGDCAAFLSNFHTSAAARVAFNGRRYDLPAWSISVLPDCRTAVYNTATVTAAS-----------SPAKMNPAGGFTWQSYGEATNSLDETAFTKDGLVEQLSMTWDKSDYLWYTTYVNIDSGEQFLKSG 481          
BLAST of EY649794 vs. ExPASy Swiss-Prot
Match: BGA10_ARATH (Beta-galactosidase 10 OS=Arabidopsis thaliana GN=BGAL10 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.717e-21
Identity = 60/147 (40.82%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  358 TIFSFFQATVYKTGSGLCSAFLANIGTNSDVTVKFNGNSYLLPAWSVSILPDCKNVVFNTAKINSVTLVPSFSRQSLQVAADSSDAIGSCWSYINEPVGISQDDAFTKPGL*EQIKTTADQSDYLWCALSTNIKPMNRYLKMGSKLV 798
            T+    +A VY   SG C+AFL+N+   +D  V F   SY LPAWSVSILPDCK  VFNTAK+ S       S +   +  D   + G  W   +E  GI     F K  L + I TT D +DYLW   S  +     +LK GS  V
Sbjct:  360 TLGHSLEADVYTDSSGTCAAFLSNLDDKNDKAVMFRNTSYHLPAWSVSILPDCKTEVFNTAKVTSK------SSKVEMLPEDLKSSSGLKWEVFSEKPGIWGAADFVKNELVDHINTTKDTTDYLWYTTSITVSENEAFLKKGSSPV 500          
The following BLAST results are available for this feature:
BLAST of EY649794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
BGAL8_ARATH4.486e-4658.68Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BG... [more]
BGAL6_ORYSJ2.162e-3249.09Beta-galactosidase 6 OS=Oryza sativa subsp. japoni... [more]
BGAL4_ORYSJ3.696e-2443.70Beta-galactosidase 4 OS=Oryza sativa subsp. japoni... [more]
BGAL4_ORYSI3.696e-2443.70Beta-galactosidase 4 OS=Oryza sativa subsp. indica... [more]
BGAL9_ARATH3.129e-2346.40Beta-galactosidase 9 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_SOLLC4.518e-2239.73Beta-galactosidase OS=Solanum lycopersicum PE=1 SV... [more]
BGAL5_ORYSJ5.900e-2240.27Beta-galactosidase 5 OS=Oryza sativa subsp. japoni... [more]
BGAL1_ARATH5.900e-2241.43Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BG... [more]
BGAL9_ORYSJ1.314e-2137.93Beta-galactosidase 9 OS=Oryza sativa subsp. japoni... [more]
BGA10_ARATH1.717e-2140.82Beta-galactosidase 10 OS=Arabidopsis thaliana GN=B... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649794 ID=EY649794; Name=EY649794; organism=Citrus sinensis; type=EST; length=944bp
ATTCCACGGCCCGACCCACGCGTCCGTGAAAATCTTTGATGAATTAATAG
GTGCATGAGAACATCATTTATTTTTACCCCTTCAATAAATTTGTAGATGT
ACTTCTTTAAGGCCTCAAAGTTTCCGATACTGGTGAAACATGATAATACT
CATCAGTTTTCATCTTCAAGAATTGTGCAGGGTTGATTGCTTATATTTGC
ATATATTCCAACCTTGTTGCATATATCTTTACCTTTTATCAAAGTAATTA
AGGAACATTACGCCTGCCCTCCAATTTCTTGTACTAAAGATTTAGTCATG
AAGGTGATACAGCTTCTTCTTAATGAGTCATGGGTAAAGAATTGGATTTT
AATTAATACGATATTTTCTTTTTTCCAGGCAACTGTTTATAAAACAGGAT
CAGGATTATGTTCTGCTTTTCTTGCCAACATAGGCACAAATTCTGATGTA
ACTGTAAAATTCAATGGCAACTCTTATCTCTTGCCTGCATGGTCCGTGAG
CATCTTACCAGACTGCAAGAATGTAGTCTTTAATACTGCAAAGATAAACT
CTGTGACCCTGGTTCCAAGCTTCAGTCGTCAATCTTTGCAAGTTGCTGCG
GATTCTTCTGATGCAATTGGATCATGCTGGAGTTACATAAATGAACCTGT
AGGCATCTCACAGGATGATGCATTTACAAAACCTGGATTATGAGAGCAAA
TAAAAACTACAGCTGACCAAAGTGACTACTTGTGGTGTGCATTAAGCACT
AACATCAAGCCGATGAACCGTTACTTGAAGATGGGATCAAAACTGGTCTT
CATGTGCCATCACTTTGCCATGCCCGNCATGCTTTCATAAAACGGCAGTC
TGGAAGAATGTGATATGGTGTCAACATTACGCTTAGGTACCAGGGATTTT
NNCCATGGACTTGACCCGGGGAAAACCATNCGACTCCTGATTTG
back to top