EY649783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.434e-41 Identity = 85/147 (57.82%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 142 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXX----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQAEGTNPDEEYESEKSMSDANDEDDDEKCIGD 564 MKGGKSK++++ A KL+VN DPNKPKRP SAFFVFMEEFR+ + K+HP+NK+ +AVGKA G KWK+MS+A+KAPYVAK+E RKVEYEK+M+ YN++QAEG +E ESEKS+S+ NDEDDDE+ G+ Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVNDEDDDEEGSGE 147
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.748e-35 Identity = 76/141 (53.90%), Postives = 100/141 (70.92%), Query Frame = 1 Query: 142 MKGGKSKSDTRNAKLSVNXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQAEGTNPDEEYESEKSMSDANDEDDDEKCIGD 564 MKGGKSK+ + N KL+V DPNKPKRP SAFFVFME+FR+ YK+ HP NKS A VGKAGG+KWK ++ A+KAP+++KAE RK EYEK+++ YN++QA G EE ES+KS S+ ND+D+D+ G+ Sbjct: 1 MKGGKSKAKSDN-KLAVKKQAADTKKTKKAVK-DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAGA--AEEEESDKSRSEVNDDDEDQDGSGE 137
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.605e-33 Identity = 79/144 (54.86%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 142 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXX-----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQAEGTNPDEEYESEKSMSDANDEDDDEK 552 MKGGKSK +++ A KL+VN DPNKPKRP SAFFVFM +FREQYKKDHP NKS AAVGKA GE+WKS+SE +KAPYV +A +K EYE ++ YN++ EG D+E S+KS S+ NDED+DE+ Sbjct: 1 MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK-LEG--KDDEEGSDKSKSEVNDEDEDEE 141
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.432e-31 Identity = 74/147 (50.34%), Postives = 96/147 (65.31%), Query Frame = 1 Query: 142 MKGGKSKSDTR-NAKLSVNXXXXXXXXXXXXXXX--DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQ--------AEGTNPDEEYESEKSMSDANDEDDDE 549 MKG KSK + +AKL+V DPNKPKR SAFFVFMEEFR+++K+ +PKNKS AAVGKA G++WKS+SE+DKAPYVAKA K+EY K + YN+ + A+ ++E ES+KS S+ NDEDD+E Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVNDEDDEE 147
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.024e-29 Identity = 74/151 (49.01%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 142 MKGGKSKSDTR-NAKLSVNXXXXXXXXXXXXXXX---DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQ-----------AEGTNPDEEYESEKSMSDANDEDDDE 549 MKG KSK + +AKL+V DPNKPKR SAFFVFM EFRE++K+ +PKNKS AAVGKA GE+WKS+SE++KAPYVAKA K EY K + YN+ + A+ ++E ES+KS S+ ND+DDDE Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEINDDDDDE 151
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGT_ONCMY (High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.450e-15 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 241 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNY-NRRQAEGTNPDEEYESEKSMSDANDEDDDEK 552 DPN PKRP+SAFF+F +FR Q K + P S V K GEKW +++ DK PY KA K +YEKD+ Y N+ + + P + K D +D+DDD++ Sbjct: 90 DPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVSMPAKAAAPAKDDDDDDDDDDDDE 193
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 9.309e-15 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 241 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRR-----------QAEGTNPDEEYESEKSMSDANDEDDDEK 552 DPN PKRP SAFF+F EFR + K +P S V K GE W ++S+ +K PY KA K +YEKD+ +Y + +A +EE E E+ + DEDDD++ Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEEEEDEEEEDEDDDDE 202
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGB1_RAT (High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14 Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 241 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQAEGTNPDEEYESEKSMSDANDEDDDE 549 DPN PKRP SAFF+F E+R + K +HP S V K GE W + + DK PY KA K +YEKD+ Y + ++EKS +EDD+E Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEE 192
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGB1_MOUSE (High mobility group protein B1 OS=Mus musculus GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14 Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 241 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQAEGTNPDEEYESEKSMSDANDEDDDE 549 DPN PKRP SAFF+F E+R + K +HP S V K GE W + + DK PY KA K +YEKD+ Y + ++EKS +EDD+E Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEE 192
BLAST of EY649783 vs. ExPASy Swiss-Prot
Match: HMGB1_CRIGR (High mobility group protein B1 (Fragment) OS=Cricetulus griseus GN=HMGB1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14 Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 241 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSFAAVGKAGGEKWKSMSEADKAPYVAKAENRKVEYEKDMKNYNRRQAEGTNPDEEYESEKSMSDANDEDDDE 549 DPN PKRP SAFF+F E+R + K +HP S V K GE W + + DK PY KA K +YEKD+ Y + ++EKS +EDD+E Sbjct: 56 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEE 157 The following BLAST results are available for this feature:
BLAST of EY649783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649783 ID=EY649783; Name=EY649783; organism=Citrus sinensis; type=EST; length=956bpback to top |