EY649772

Overview
NameEY649772
Unique NameEY649772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649772 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.486e-31
Identity = 102/283 (36.04%), Postives = 142/283 (50.18%), Query Frame = 3
Query:   42 GINVLVDKSLIVISNGDRITMHDLLQELGRDIVLQESVN-PGNRSRLWHHEDIYGVLTYNTGTEKIEGICLDMSKVKEICLNPNTFTKMCRLRFLKFYSSINGENKCQVSDFRALRF--AEVRYLHWHGYPFKSLPSNIHPGKLVILEIPHSNIEQLSESVQHH--------GKLNQIIMAACNIFTKTPNHS---------------------LIQHLNKLVILNLRGCSKLKSLPEI--------------SSAG-------NIEKNKLDGTAXEELPSSI 731
            G   LVDKSL+ IS  + + M   +Q  GR+IV QES + PG+RSRLW+ + I  V   +TGT  IEGI LDM  +K    NPN F KMC LR LK Y S   E K  VS  + L +  +++R LHW  YP  SLP + +P  LV L +P S  ++L +  +           KL ++ ++  +  TK P  S                      I +L KLV LNL+GCSKL+++P +              S  G       N+++  + GT  +E+PSSI
Sbjct: 1088 GFRGLVDKSLLTISQHNLVDMLSFIQATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLNLK-FDANPNVFEKMCNLRLLKLYCS-KAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSI 1368          
BLAST of EY649772 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.427e-28
Identity = 95/303 (31.35%), Postives = 148/303 (48.84%), Query Frame = 3
Query:   42 GINVLVDKSLIVISNGDRITMHDLLQELGRDIVLQESV-NPGNRSRLWHHEDIYGVLTYNTGTEKIEGICLDMSKVKE-ICLNPNTFTKMCRLRFLKFYSSINGENKCQVS----DFRALRFAEVRYLHWHGYPFKSLPSNIHPGKLVILEIPHSNIEQLSESVQ-----------------------HHGKLNQIIMAACNIFTKTPNH-SLIQH--------------------LNKLVILNLRGCSKLKSLPEISSAGNIEKNKLDGTAXEELPSSIGCLSRLFGLNPCRCKILRVSKQP 800
            G+ VL DKSLI      RI MH LL++LG+++V ++S+  PG R  L + ++  GVL+ NTGT  + GI LDM ++KE + ++  TF +M  L +LKFY S   ++K +V     +       ++R LHW  YP +  PS+  P  LV L + HS +++L   VQ                          KLN++ +  C    + P+    +QH                    L  L +L+ R C++L++ PEIS+  NI    L GTA  E+P S+   S++  +   R K+ R+   P
Sbjct:  464 GLQVLADKSLIQKFENGRIEMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEELYISEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLPQLRLLHWDAYPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQTFPEIST--NIRLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVP 764          
BLAST of EY649772 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 7.900e-25
Identity = 90/266 (33.83%), Postives = 128/266 (48.12%), Query Frame = 3
Query:   45 INVLVDKSLIVISNGDRITMHDLLQELGRDIVLQESVNPGNRSRLWHHEDIYGVLTYNT---------------GTEKIEGICLDMSKVKEICLNPNTFTKMCRLRFLKFYSS---INGENKCQVSDFRALRFAEVRYLHWHGYPFKSLPSNIHPGKLVILEIPHSNIEQLSESVQHHGKLNQI-------------IMAACNI-------FTKTPNHSLIQHLNKLVILNLRGCSKLKSLPEISSAGNIEKNKLDGTAXEELPSS 728
            I+VLVDK L+ IS  +R+ +H L Q++GR+I+  E+V    R RLW    I  +L YN                G+E+IEG+ LD S ++   L P+ F  M  LR LK Y S   ++           +L   E+R LHW  YP KSLP N  P  LV + +P+S +++L    ++   L  I             ++ A N+        T+  N      L +L ++NL GC K+KS+ EI    NIEK  L GT    LP S
Sbjct:  424 IDVLVDKCLVTISE-NRVWLHKLTQDIGREIINGETVQIERRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLR-FDLQPSAFKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLP-NELRLLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNFPAAGRLLRLRVVNLSGCIKIKSVLEIPP--NIEKLHLQGTGILALPVS 684          
BLAST of EY649772 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.299e-21
Identity = 87/271 (32.10%), Postives = 127/271 (46.86%), Query Frame = 3
Query:   42 GINVLVDKSLIVISNGDRITMHDLLQELGRDIVLQESVNPGNRSRLWHHEDIYGVL-------------TYNTGT--EKIEGICLDMSKVKEICLNPNTFTKMCRLRFLKFYSS------INGENKCQVSDFRALRFAEVRYLHWHGYPFKSLPSNIHPGKLVILEIPHSNIEQLSESVQHHGKLNQI-------------IMAACNI-------FTKTPNHSLIQHLNKLVILNLRGCSKLKSLPEISSAGNIEKNKLDGTAXEELPSSI 731
            GI+VLV+KSL+ IS  +R+ MH+L+Q++GR I+ +E+     RSRLW    I  +L             T+      E+IEG+ LD S +    +    F  M  LR  K YSS      +N   K  +S    +    +R LHW  YP + LP N  P  LV + +P+S +++L    +    L  I             ++ A N+        T+  +      L  L ++NL GC+++KS PEI    NIE   L GT   ELP SI
Sbjct:  416 GIDVLVEKSLVTISE-NRVRMHNLIQDVGRQIINRETRQTKRRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEEIEGMFLDTSNLS-FDIKHVAFDNMLNLRLFKIYSSNPEVHHVNNFLKGSLSSLPNV----LRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSFPATGQLLHLRVVNLSGCTEIKSFPEIPP--NIETLNLQGTGIIELPLSI 678          
BLAST of EY649772 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.354e-18
Identity = 72/250 (28.80%), Postives = 120/250 (48.00%), Query Frame = 3
Query:   42 GINVLVDKSLIVISNGDRITMHDLLQELGRDIVLQESVNPGNRSRLWHHEDIYGVLTYNTGTEKIEGICLDMSKVKEICLNPNTFTKMCRLRFLKFYSSINGENKCQVSDFRALRFA--EVRYLHWHGYPFKSLPSNIHPGKLVILEIPHSNIEQLSESVQHHGKLNQIIMAACNIFTKTPNHSLIQHLNKLVILNLRGCSKLKSLPEISSAGNIEKNKLDGTAXEELPSSIGCLSRLFGLNPCRCKILR 785
            G+ +L+DKSL+ IS  +++ MHDL+Q++G+ IV  +  +PG RSRLW  +++  V++ NTGT  +E I +  S    +  +      M RLR           N  + S   A+ +    +R      YP++S PS      LV L++ H+++  L    +H   L +I ++     T+TP+ + + +L     +NL  CS L                      EE+  S+GC S++ GL    CK L+
Sbjct:  467 GLRILIDKSLVFISEYNQVQMHDLIQDMGKYIVNFQK-DPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVS-SYSSTLRFSNQAVKNMKRLRVF---------NMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTFELKMLVHLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLE---YVNLYQCSNL----------------------EEVHHSLGCCSKVIGLYLNDCKSLK 680          
The following BLAST results are available for this feature:
BLAST of EY649772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WRK19_ARATH1.486e-3136.04Probable WRKY transcription factor 19 OS=Arabidops... [more]
Y4117_ARATH3.427e-2831.35Putative disease resistance protein At4g11170 OS=A... [more]
WRK52_ARATH7.900e-2533.83Probable WRKY transcription factor 52 OS=Arabidops... [more]
WRK16_ARATH5.299e-2132.10Probable WRKY transcription factor 16 OS=Arabidops... [more]
TMVRN_NICGU9.354e-1828.80TMV resistance protein N OS=Nicotiana glutinosa GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-D01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649772 ID=EY649772; Name=EY649772; organism=Citrus sinensis; type=EST; length=980bp
CAGTCCTCGGTCCGGNATTCCACGCCCGACCCACGCGTCCGGGAATAAAT
GTTCTTGTTGATAAGTCTCTTATTGTCATATCAAACGGTGACAGGATAAC
AATGCATGATTTGCTACAAGAATTGGGTAGGGATATTGTCCTTCAAGAAT
CAGTTAATCCTGGAAACCGCAGTCGGTTATGGCATCATGAGGATATCTAT
GGAGTTCTTACATATAATACGGGGACTGAAAAAATTGAGGGCATCTGCTT
GGATATGTCTAAAGTGAAAGAGATTTGTCTAAATCCCAATACTTTCACAA
AGATGTGTAGATTGAGATTTTTGAAATTTTATAGTTCAATAAATGGAGAG
AACAAATGTCAAGTCTCTGATTTCCGAGCCCTTAGATTTGCTGAAGTGAG
GTATCTTCACTGGCATGGATATCCATTTAAATCATTACCTTCAAATATTC
ATCCGGGGAAACTTGTTATACTTGAAATCCCTCACAGCAATATTGAACAG
CTTTCTGAAAGTGTCCAGCATCATGGTAAGTTAAACCAGATAATCATGGC
TGCCTGCAATATTTTTACCAAAACGCCAAACCACTCGTTGATTCAACATC
TGAATAAGCTGGTTATCCTGAATCTACGTGGTTGCTCAAAACTGAAGAGC
CTNCCGGAGATCTCATCAGCTGGTAATATAGAAAAAAATAAATTAGATGG
AACTGCAATNGAAGAACTGCCCTCATCCATCGGATGTCTATCTAGGCTTT
TTGGATTGAACCCNTGCAGATGCAAAATCTTAAGAGTCTCCAAGCAGCCT
ATGTAANGTGAATTCTCTGGAAGAGTATGCTAAATCGATCCGCAATNGAG
AGCCTGGCTCACCATCGAGTGTCTTCTGCGCTTGCGTCTTAAGCTTGAAG
TGTAAAGTCTTAGAGTCTCAATACCTAGGATGGCTGNCAGCCTACGTTCC
ATTCTACTGATGGGCATCCANAGTACCTGA
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