EY649769

Overview
NameEY649769
Unique NameEY649769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2)

HSP 1 Score: 315.079 bits (806), Expect = 3.502e-85
Identity = 163/229 (71.18%), Postives = 184/229 (80.35%), Query Frame = 1
Query:  109 MATAQLTASSIKVPARSLTSFDGLRPASVKFASVG-GAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNXKPLSIAXGNTVMYSKYAG 792
            MA  QLTAS + + ARSL S DGLR +SVKF+S+  G   Q  FRRL         PKYTSIKPLGDRVLVKIK  EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK K+DI+V  G Q+IYSKYAGTE+EFN   HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIG VIAVGPG LDEEG   PL ++ G+TV+YSKYAG
Sbjct:    1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAG 229          

HSP 2 Score: 78.5666 bits (192), Expect = 5.517e-14
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1
Query:  289 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELE-FNGANHLILREDDVVGIL 561
            +KPL DRV +K+   EEKT GG+ L  T + KP  G V+AVG G    + K+  + V  G+ V+YSKYAG + +  +G+N++ LR  DV+ IL
Sbjct:  160 LKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.094e-70
Identity = 137/238 (57.56%), Postives = 172/238 (72.27%), Query Frame = 1
Query:  109 MATAQLTASSIKVPARSLTSFDGLRPAS----VKFASVGGAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNXKPLSIAXGNTVMYSKYAGK*LRAV 810
            MA   LT++S  +   +L SF+GLR AS    +  +    + + RSFR L          KYTS+KPLGDRVL+K K VEEKT  GIFLP+ AQ KPQ+GEVVA+G GK VG  KL ++VK G +V+YSKY GTE+E +G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E  T+GGLLL E+SKEKPS G V+A GPG LDEEGN  PL +  GNTV+YSKYAG   + V
Sbjct:    1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGV 237          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23
Identity = 48/95 (50.53%), Postives = 72/95 (75.79%), Query Frame = 1
Query:  289 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDE 573
            IKPL DRV++K +  EEKT+ G+++P TA+ KPQ G V+AVG G+    TK+++SVK G +V+Y KYAGTE+  +G  +LI+RE D++GI+E ++
Sbjct:    6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.492e-23
Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  289 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 564
            +KPLGDRV+VK+   EE T GG+ LP TA+ KPQ GEVVAVG G+ +   K+++ VK G +VI+SKYAGTE++ +G  +L+LRE D++ I+E
Sbjct:    3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.492e-23
Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  289 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 564
            +KPLGDRV+VK+   EE T GG+ LP TA+ KPQ GEVVAVG G+ +   K+++ VK G +VI+SKYAGTE++ +G  +L+LRE D++ I+E
Sbjct:    3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.492e-23
Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  289 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 564
            +KPLGDRV+VK+   EE T GG+ LP TA+ KPQ GEVVAVG G+ +   K+++ VK G +VI+SKYAGTE++ +G  +L+LRE D++ I+E
Sbjct:    3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.227e-22
Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 1
Query:  286 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 564
            ++KPLGDR+++KI   EEKT+ GI LP  A+ KPQ GEVVAVG GKT+   +K++  VK G +V+YSK+AG E+E +G  +LI+R+DD++ ++E
Sbjct:    2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95          

HSP 2 Score: 70.8626 bits (172), Expect = 1.150e-11
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1
Query:  580 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNXKPLSIAXGNTVMYSKYAG 792
            +LKPL DR+ IK+ EAEE T  G++L E +KEKP  G V+AVG G   ++G+     +  G+ V+YSK+AG
Sbjct:    2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAG 72          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.389e-22
Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1
Query:  286 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 564
            ++KPL DRVLVK    EEKT GG+++P TA+ KP  GEVVA G GKT    KL  ++VK G  V+++KYAGTE++ +G  HL++REDD++ I+E
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95          

HSP 2 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  580 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNXKPLSIAXGNTVMYSKYAG 792
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G V+A GPG   ++G    +++  G+ V+++KYAG
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAG 72          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.389e-22
Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1
Query:  286 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 564
            ++KPL DRVLVK    EEKT GG+++P TA+ KP  GEVVA G GKT    KL  ++VK G  V+++KYAGTE++ +G  HL++REDD++ I+E
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95          

HSP 2 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  580 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNXKPLSIAXGNTVMYSKYAG 792
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G V+A GPG   ++G    +++  G+ V+++KYAG
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAG 72          
BLAST of EY649769 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.389e-22
Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1
Query:  286 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 561
            +IKPLGDRV++K   +EEKT  GI +P TA+ KPQ GEVVAVG GK     ++ + VK G +VIYSKYAGTE++++G  +LIL+E D++ ++
Sbjct:    2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93          

HSP 2 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 1
Query:  580 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNXKPLSIAXGNTVMYSKYAG 792
            ++KPL DRV IK    EE T  G+++ + +KEKP  G V+AVGPG + E+G    L +  G+ V+YSKYAG
Sbjct:    2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAG 71          
The following BLAST results are available for this feature:
BLAST of EY649769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 492
Match NameE-valueIdentityDescription
CH10C_ARATH3.502e-8571.1820 kDa chaperonin, chloroplastic OS=Arabidopsis th... [more]
CH10C_SPIOL1.094e-7057.5620 kDa chaperonin, chloroplastic OS=Spinacia olera... [more]
CH10_RHOMR4.978e-2350.5310 kDa chaperonin OS=Rhodothermus marinus GN=groS ... [more]
CH10_THEPX8.492e-2354.3510 kDa chaperonin OS=Thermoanaerobacter sp. (strai... [more]
CH10_THEP38.492e-2354.3510 kDa chaperonin OS=Thermoanaerobacter pseudethan... [more]
CH10_THEBR8.492e-2354.3510 kDa chaperonin OS=Thermoanaerobacter brockii GN... [more]
CH10_NATTJ3.227e-2252.1310 kDa chaperonin OS=Natranaerobius thermophilus (... [more]
CH10_DESVV9.389e-2253.1910 kDa chaperonin OS=Desulfovibrio vulgaris subsp.... [more]
CH10_DESVH9.389e-2253.1910 kDa chaperonin OS=Desulfovibrio vulgaris (strai... [more]
CH10_DESHY9.389e-2253.2610 kDa chaperonin OS=Desulfitobacterium hafniense ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-C10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649769 ID=EY649769; Name=EY649769; organism=Citrus sinensis; type=EST; length=899bp
CGTACTCTTCTTCAAATTTCAACTAGAAACCTTATCAAACTACTCGCTCG
CTTCTCGCTTATCATTTCCAATCAGAATCTCTCTCGCTCTCTCTGCATCT
GCAAGCAGATGGCGACAGCTCAGCTAACAGCGTCATCAATTAAGGTTCCA
GCAAGGAGCTTGACTTCATTCGATGGTCTCAGACCGGCTTCCGTCAAGTT
CGCTTCCGTCGGAGGTGCTCCCAGCCAACGCTCTTTCCGTCGCTTGGTCG
TTAAAGCCGCTGCAGTCGTGGCTCCCAAGTACACTTCAATTAAACCTTTG
GGTGATAGAGTGCTGGTGAAAATCAAGACTGTAGAGGAGAAAACTGATGG
TGGTATTTTTCTGCCATCTACAGCTCAAACAAAGCCTCAAGCAGGTGAGG
TGGTAGCTGTTGGCGAGGGGAAGACAGTTGGGAAGACTAAACTGGACATA
TCTGTGAAGCCTGGGACCCAGGTCATCTATTCGAAGTATGCAGGGACTGA
GTTGGAGTTCAATGGCGCAAATCATCTCATATTGAGGGAGGATGACGTAG
TTGGCATTCTTGAAACAGATGAAATCAAGGATCTTAAGCCCCTTAATGAC
AGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACTGCTGGAGGTTT
GTTGTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTGGAATGGTCATTG
CTGTTGGACCCGGTCCTCTAGATGAGGAAGGTAATANGAAACCTCTATCC
ATTGCTNCAGGGAACACGGTGATGTATTCCAAGTATGCAGGGAAATGACT
CAGGGCAGTGATGGTACCAACTACATTGCTTTAGAGCTTCTGAGTGATGG
CTGNNGCTCTCTAGTGNCTGTGTTACTTGAGCGAGGCTTATTGTATNAT
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